RNA–Protein interactions for RNA: ENST00000563003.1

AC040174.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC040174.1, Length 2,571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC040174.1-201ENST00000563003 MLH3Q9UHC1 1453 aa18.07■□□□□ 0.48
AC040174.1-201ENST00000563003 VWDEQ8N2E2 1590 aa18.07■□□□□ 0.48
AC040174.1-201ENST00000563003 RCAN3Q9UKA8 241 aa18.06■□□□□ 0.48
AC040174.1-201ENST00000563003 TET3O43151 1660 aa18.06■□□□□ 0.48
AC040174.1-201ENST00000563003 PPRC1Q5VV67 1664 aaKnown RBP18.06■□□□□ 0.48
AC040174.1-201ENST00000563003 MAP3K4Q9Y6R4 1608 aa18.05■□□□□ 0.48
AC040174.1-201ENST00000563003 KDM2AQ9Y2K7 1162 aa18.05■□□□□ 0.48
AC040174.1-201ENST00000563003 PRDM15P57071 1507 aaPredicted RBP18.05■□□□□ 0.48
AC040174.1-201ENST00000563003 HECW2Q9P2P5 1572 aa18.04■□□□□ 0.48
AC040174.1-201ENST00000563003 USP47Q96K76 1375 aa18.03■□□□□ 0.48
AC040174.1-201ENST00000563003 A2MP01023 1474 aa18.03■□□□□ 0.48
AC040174.1-201ENST00000563003 MROH1Q8NDA8 1641 aa18.02■□□□□ 0.48
AC040174.1-201ENST00000563003 PTPRTO14522 1441 aa18.02■□□□□ 0.47
AC040174.1-201ENST00000563003 SPHKAPQ2M3C7 1700 aa18.02■□□□□ 0.47
AC040174.1-201ENST00000563003 LRPPRCP42704 1394 aaKnown RBP18.02■□□□□ 0.47
AC040174.1-201ENST00000563003 SLC4A3P48751 1232 aa18.01■□□□□ 0.47
AC040174.1-201ENST00000563003 RGL3Q3MIN7 710 aa18.01■□□□□ 0.47
AC040174.1-201ENST00000563003 TRPM2O94759 1503 aa18.01■□□□□ 0.47
AC040174.1-201ENST00000563003 SKAP1Q86WV1 359 aa18.01■□□□□ 0.47
AC040174.1-201ENST00000563003 PRAG1Q86YV5 1406 aa18■□□□□ 0.47
AC040174.1-201ENST00000563003 CARD11Q9BXL7 1154 aa18■□□□□ 0.47
AC040174.1-201ENST00000563003 RNF17Q9BXT8 1623 aaKnown RBP17.99■□□□□ 0.47
AC040174.1-201ENST00000563003 TRPM1Q7Z4N2 1603 aa17.98■□□□□ 0.47
AC040174.1-201ENST00000563003 CEP152O94986 1710 aa17.97■□□□□ 0.47
AC040174.1-201ENST00000563003 BCORL1Q5H9F3 1711 aa17.97■□□□□ 0.47
AC040174.1-201ENST00000563003 RSPH6AQ9H0K4 717 aa17.96■□□□□ 0.47
AC040174.1-201ENST00000563003 ROCK2O75116 1388 aaKnown RBP17.96■□□□□ 0.47
AC040174.1-201ENST00000563003 FRMPD1Q5SYB0 1578 aa17.96■□□□□ 0.47
AC040174.1-201ENST00000563003 ABCA6Q8N139 1617 aa17.96■□□□□ 0.47
AC040174.1-201ENST00000563003 LMTK2Q8IWU2 1503 aa17.96■□□□□ 0.47
AC040174.1-201ENST00000563003 RICTORQ6R327 1708 aa17.95■□□□□ 0.46
AC040174.1-201ENST00000563003 RAPGEF3O95398 923 aa17.95■□□□□ 0.46
AC040174.1-201ENST00000563003 ARID4BQ4LE39 1312 aaPredicted RBP17.95■□□□□ 0.46
AC040174.1-201ENST00000563003 DAXXQ9UER7 740 aaPredicted RBP17.94■□□□□ 0.46
AC040174.1-201ENST00000563003 EFCAB6Q5THR3 1501 aa17.94■□□□□ 0.46
AC040174.1-201ENST00000563003 CLTCL1P53675 1640 aa17.94■□□□□ 0.46
AC040174.1-201ENST00000563003 FAM43AQ8N2R8 423 aa17.93■□□□□ 0.46
AC040174.1-201ENST00000563003 BRD4O60885 1362 aaPredicted RBP17.93■□□□□ 0.46
AC040174.1-201ENST00000563003 PLIN1O60240 522 aa17.92■□□□□ 0.46
AC040174.1-201ENST00000563003 STAC3Q96MF2 364 aa17.92■□□□□ 0.46
AC040174.1-201ENST00000563003 GPRASP1Q5JY77 1395 aa17.92■□□□□ 0.46
AC040174.1-201ENST00000563003 MYBBP1AQ9BQG0 1328 aaKnown RBP17.91■□□□□ 0.46
AC040174.1-201ENST00000563003 PDE3BQ13370 1112 aa17.91■□□□□ 0.46
AC040174.1-201ENST00000563003 LAMC1P11047 1609 aa17.91■□□□□ 0.46
AC040174.1-201ENST00000563003 COL17A1Q9UMD9 1497 aaPredicted RBP17.91■□□□□ 0.46
AC040174.1-201ENST00000563003 NEURL4Q96JN8 1562 aa17.91■□□□□ 0.46
AC040174.1-201ENST00000563003 FRAT2O75474 233 aaPredicted RBP17.9■□□□□ 0.46
AC040174.1-201ENST00000563003 DIP2CQ9Y2E4 1556 aa17.9■□□□□ 0.46
AC040174.1-201ENST00000563003 CDCA7LQ96GN5 454 aa17.9■□□□□ 0.46
AC040174.1-201ENST00000563003 CRBNQ96SW2 442 aa17.9■□□□□ 0.46
AC040174.1-201ENST00000563003 ST20-MTHFSA0A0A6YYL1 179 aa17.89■□□□□ 0.46
AC040174.1-201ENST00000563003 RALBP1Q15311 655 aa17.88■□□□□ 0.45
AC040174.1-201ENST00000563003 NBPF1Q3BBV0 1214 aa17.88■□□□□ 0.45
AC040174.1-201ENST00000563003 GGT6Q6P531 493 aa17.88■□□□□ 0.45
AC040174.1-201ENST00000563003 KIF1BO60333 1816 aa17.86■□□□□ 0.45
AC040174.1-201ENST00000563003 MADDQ8WXG6 1647 aa17.85■□□□□ 0.45
AC040174.1-201ENST00000563003 KTN1Q86UP2 1357 aaKnown RBP17.85■□□□□ 0.45
AC040174.1-201ENST00000563003 ZMYM4Q5VZL5 1548 aa17.84■□□□□ 0.45
AC040174.1-201ENST00000563003 ABCC3O15438 1527 aa17.84■□□□□ 0.45
AC040174.1-201ENST00000563003 NPATQ14207 1427 aa17.83■□□□□ 0.44
AC040174.1-201ENST00000563003 YEATS2Q9ULM3 1422 aa17.83■□□□□ 0.44
AC040174.1-201ENST00000563003 FAM161AQ3B820 660 aa17.82■□□□□ 0.44
AC040174.1-201ENST00000563003 KDM2BQ8NHM5 1336 aa17.82■□□□□ 0.44
AC040174.1-201ENST00000563003 UGGT1Q9NYU2 1555 aa17.82■□□□□ 0.44
AC040174.1-201ENST00000563003 C8orf34Q49A92 452 aa17.82■□□□□ 0.44
AC040174.1-201ENST00000563003 CFAP65Q6ZU64 1925 aaKnown RBP17.81■□□□□ 0.44
AC040174.1-201ENST00000563003 NLRP13Q86W25 1043 aa17.81■□□□□ 0.44
AC040174.1-201ENST00000563003 CAMSAP1Q5T5Y3 1602 aa17.8■□□□□ 0.44
AC040174.1-201ENST00000563003 C20orf194Q5TEA3 1177 aa17.8■□□□□ 0.44
AC040174.1-201ENST00000563003 ZC3H13Q5T200 1668 aaKnown RBP17.79■□□□□ 0.44
AC040174.1-201ENST00000563003 KIAA1210Q9ULL0 1709 aa17.78■□□□□ 0.44
AC040174.1-201ENST00000563003 CENPQQ7L2Z9 268 aaPredicted RBP17.78■□□□□ 0.44
AC040174.1-201ENST00000563003 MYOM2P54296 1465 aa17.78■□□□□ 0.44
AC040174.1-201ENST00000563003 IFT172Q9UG01 1749 aa17.77■□□□□ 0.43
AC040174.1-201ENST00000563003 PKNOX2Q96KN3 472 aa17.77■□□□□ 0.43
AC040174.1-201ENST00000563003 MROH2AA6NES4 1674 aa17.76■□□□□ 0.43
AC040174.1-201ENST00000563003 ADGRB3O60242 1522 aa17.76■□□□□ 0.43
AC040174.1-201ENST00000563003 ARHGAP31Q2M1Z3 1444 aa17.76■□□□□ 0.43
AC040174.1-201ENST00000563003 RRAGDQ9NQL2 400 aaPredicted RBP17.76■□□□□ 0.43
AC040174.1-201ENST00000563003 IQGAP1P46940 1657 aa17.75■□□□□ 0.43
AC040174.1-201ENST00000563003 TESK2Q96S53 571 aa17.75■□□□□ 0.43
AC040174.1-201ENST00000563003 NOS1P29475 1434 aa17.74■□□□□ 0.43
AC040174.1-201ENST00000563003 PARD3Q8TEW0 1356 aa17.74■□□□□ 0.43
AC040174.1-201ENST00000563003 POGKQ9P215 609 aa17.74■□□□□ 0.43
AC040174.1-201ENST00000563003 REREQ9P2R6 1566 aa17.73■□□□□ 0.43
AC040174.1-201ENST00000563003 SIGLEC1Q9BZZ2 1709 aa17.73■□□□□ 0.43
AC040174.1-201ENST00000563003 SCAF11Q99590 1463 aaKnown RBP17.72■□□□□ 0.43
AC040174.1-201ENST00000563003 TMF1P82094 1093 aa17.71■□□□□ 0.43
AC040174.1-201ENST00000563003 NRXN1Q9ULB1 1477 aa17.71■□□□□ 0.43
AC040174.1-201ENST00000563003 CHGAP10645 457 aaKnown RBP17.7■□□□□ 0.42
AC040174.1-201ENST00000563003 RPGRIP1LQ68CZ1 1315 aa17.7■□□□□ 0.42
AC040174.1-201ENST00000563003 ADGRF5Q8IZF2 1346 aa17.7■□□□□ 0.42
AC040174.1-201ENST00000563003 PIK3C2BO00750 1634 aa17.7■□□□□ 0.42
AC040174.1-201ENST00000563003 RGS3P49796 1198 aa17.7■□□□□ 0.42
AC040174.1-201ENST00000563003 AGLP35573 1532 aa17.69■□□□□ 0.42
AC040174.1-201ENST00000563003 PPLO60437 1756 aa17.69■□□□□ 0.42
AC040174.1-201ENST00000563003 DISP3Q9P2K9 1392 aa17.69■□□□□ 0.42
AC040174.1-201ENST00000563003 SYNMO15061 1565 aa17.68■□□□□ 0.42
AC040174.1-201ENST00000563003 BLMP54132 1417 aaPredicted RBP17.68■□□□□ 0.42
AC040174.1-201ENST00000563003 EIF3AQ14152 1382 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms