RNA–Protein interactions for RNA: ENST00000562881.1

FAN1-204, Transcript of FANCD2 and FANCI associated nuclease 1, humanhuman

TSL 3

Gene FAN1, Length 525 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAN1-204ENST00000562881 NRXN1Q9ULB1 1477 aa17.62■□□□□ 0.41
FAN1-204ENST00000562881 SYNMO15061 1565 aa17.62■□□□□ 0.41
FAN1-204ENST00000562881 EIF3AQ14152 1382 aaKnown RBP17.61■□□□□ 0.41
FAN1-204ENST00000562881 SIGLEC1Q9BZZ2 1709 aa17.61■□□□□ 0.41
FAN1-204ENST00000562881 ERVK-7P63135 1459 aa17.6■□□□□ 0.41
FAN1-204ENST00000562881 MROH2AA6NES4 1674 aa17.6■□□□□ 0.41
FAN1-204ENST00000562881 CFAP65Q6ZU64 1925 aaKnown RBP17.59■□□□□ 0.41
FAN1-204ENST00000562881 SCAF11Q99590 1463 aaKnown RBP17.59■□□□□ 0.41
FAN1-204ENST00000562881 ST20-MTHFSA0A0A6YYL1 179 aa17.59■□□□□ 0.41
FAN1-204ENST00000562881 CHGAP10645 457 aaKnown RBP17.59■□□□□ 0.41
FAN1-204ENST00000562881 PPLO60437 1756 aa17.58■□□□□ 0.41
FAN1-204ENST00000562881 VGFO15240 615 aaPredicted RBP17.58■□□□□ 0.4
FAN1-204ENST00000562881 NBPF1Q3BBV0 1214 aa17.58■□□□□ 0.4
FAN1-204ENST00000562881 CLTCQ00610 1675 aaKnown RBP17.58■□□□□ 0.4
FAN1-204ENST00000562881 ZFYVE9O95405 1425 aa17.56■□□□□ 0.4
FAN1-204ENST00000562881 IQGAP1P46940 1657 aa17.56■□□□□ 0.4
FAN1-204ENST00000562881 C11orf95C9JLR9 678 aaPredicted RBP17.56■□□□□ 0.4
FAN1-204ENST00000562881 SPATA31D1Q6ZQQ2 1576 aa17.56■□□□□ 0.4
FAN1-204ENST00000562881 SETBP1Q9Y6X0 1596 aa17.56■□□□□ 0.4
FAN1-204ENST00000562881 CDCA8Q53HL2 280 aa17.55■□□□□ 0.4
FAN1-204ENST00000562881 IDI1Q13907 227 aa17.54■□□□□ 0.4
FAN1-204ENST00000562881 TMF1P82094 1093 aa17.53■□□□□ 0.4
FAN1-204ENST00000562881 PIK3C2GO75747 1445 aa17.52■□□□□ 0.4
FAN1-204ENST00000562881 ADGRF5Q8IZF2 1346 aa17.51■□□□□ 0.39
FAN1-204ENST00000562881 NEXMIFQ5QGS0 1516 aa17.51■□□□□ 0.39
FAN1-204ENST00000562881 TMEM131LA2VDJ0 1609 aa17.5■□□□□ 0.39
FAN1-204ENST00000562881 C14orf93Q9H972 538 aaKnown RBP17.5■□□□□ 0.39
FAN1-204ENST00000562881 MLECQ14165 292 aa17.49■□□□□ 0.39
FAN1-204ENST00000562881 ZMYM3Q14202 1370 aa17.49■□□□□ 0.39
FAN1-204ENST00000562881 ADAMTSL3P82987 1691 aa17.48■□□□□ 0.39
FAN1-204ENST00000562881 TESK2Q96S53 571 aa17.48■□□□□ 0.39
FAN1-204ENST00000562881 STAG3Q9UJ98 1225 aa17.48■□□□□ 0.39
FAN1-204ENST00000562881 CFAP70Q5T0N1 1121 aa17.47■□□□□ 0.39
FAN1-204ENST00000562881 KTN1Q86UP2 1357 aaKnown RBP17.47■□□□□ 0.39
FAN1-204ENST00000562881 FBXO31Q5XUX0 539 aaPredicted RBP17.46■□□□□ 0.39
FAN1-204ENST00000562881 POLR3GLQ9BT43 218 aa17.46■□□□□ 0.39
FAN1-204ENST00000562881 KDM5AP29375 1690 aaKnown RBP17.45■□□□□ 0.38
FAN1-204ENST00000562881 PTPRMP28827 1452 aa17.45■□□□□ 0.38
FAN1-204ENST00000562881 SBNO2Q9Y2G9 1366 aa17.45■□□□□ 0.38
FAN1-204ENST00000562881 HDGFP51858 240 aaKnown RBP17.45■□□□□ 0.38
FAN1-204ENST00000562881 MYO3AQ8NEV4 1616 aa17.44■□□□□ 0.38
FAN1-204ENST00000562881 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.44■□□□□ 0.38
FAN1-204ENST00000562881 TNRQ92752 1358 aa17.43■□□□□ 0.38
FAN1-204ENST00000562881 YTHDC1Q96MU7 727 aaKnown RBP17.42■□□□□ 0.38
FAN1-204ENST00000562881 PRKRIP1Q9H875 184 aaPredicted RBP17.42■□□□□ 0.38
FAN1-204ENST00000562881 MYO5BQ9ULV0 1848 aa17.41■□□□□ 0.38
FAN1-204ENST00000562881 A2ML1A8K2U0 1454 aa17.41■□□□□ 0.38
FAN1-204ENST00000562881 ADGRB1O14514 1584 aa17.4■□□□□ 0.38
FAN1-204ENST00000562881 NLRP1Q9C000 1473 aa17.4■□□□□ 0.38
FAN1-204ENST00000562881 DISP3Q9P2K9 1392 aa17.4■□□□□ 0.38
FAN1-204ENST00000562881 CENPJQ9HC77 1338 aaPredicted RBP17.39■□□□□ 0.37
FAN1-204ENST00000562881 RIMS2Q9UQ26 1411 aa17.38■□□□□ 0.37
FAN1-204ENST00000562881 RALBP1Q15311 655 aa17.37■□□□□ 0.37
FAN1-204ENST00000562881 FBXO41Q8TF61 875 aa17.37■□□□□ 0.37
FAN1-204ENST00000562881 RIMS1Q86UR5 1692 aaKnown RBP17.36■□□□□ 0.37
FAN1-204ENST00000562881 FER1L4A9Z1Z3 1794 aa17.36■□□□□ 0.37
FAN1-204ENST00000562881 PUS7Q96PZ0 661 aaKnown RBP17.36■□□□□ 0.37
FAN1-204ENST00000562881 ALKQ9UM73 1620 aa17.32■□□□□ 0.36
FAN1-204ENST00000562881 LMTK3Q96Q04 1460 aa17.31■□□□□ 0.36
FAN1-204ENST00000562881 TRAK1Q9UPV9 953 aa17.31■□□□□ 0.36
FAN1-204ENST00000562881 QRICH2Q9H0J4 1663 aa17.31■□□□□ 0.36
FAN1-204ENST00000562881 C3P01024 1663 aa17.3■□□□□ 0.36
FAN1-204ENST00000562881 UBR1Q8IWV7 1749 aa17.3■□□□□ 0.36
FAN1-204ENST00000562881 ARHGEF28Q8N1W1 1705 aaKnown RBP17.3■□□□□ 0.36
FAN1-204ENST00000562881 NUTM2DQ5VT03 806 aaPredicted RBP17.29■□□□□ 0.36
FAN1-204ENST00000562881 YTHDC2Q9H6S0 1430 aaKnown RBP17.29■□□□□ 0.36
FAN1-204ENST00000562881 TMEM2Q9UHN6 1383 aa17.28■□□□□ 0.36
FAN1-204ENST00000562881 EVC2Q86UK5 1308 aa17.28■□□□□ 0.36
FAN1-204ENST00000562881 MYBBP1AQ9BQG0 1328 aaKnown RBP17.28■□□□□ 0.36
FAN1-204ENST00000562881 DLC1Q96QB1 1528 aa17.28■□□□□ 0.36
FAN1-204ENST00000562881 TMEM132EQ6IEE7 984 aa17.28■□□□□ 0.36
FAN1-204ENST00000562881 PANK3Q9H999 370 aa17.28■□□□□ 0.36
FAN1-204ENST00000562881 MRS2Q9HD23 443 aa17.28■□□□□ 0.36
FAN1-204ENST00000562881 PER1O15534 1290 aaPredicted RBP17.27■□□□□ 0.36
FAN1-204ENST00000562881 KNSTRNQ9Y448 316 aa17.27■□□□□ 0.36
FAN1-204ENST00000562881 BRD4O60885 1362 aaPredicted RBP17.27■□□□□ 0.35
FAN1-204ENST00000562881 NPC1L1Q9UHC9 1359 aa17.27■□□□□ 0.35
FAN1-204ENST00000562881 LRPPRCP42704 1394 aaKnown RBP17.26■□□□□ 0.35
FAN1-204ENST00000562881 ASXL1Q8IXJ9 1541 aa17.26■□□□□ 0.35
FAN1-204ENST00000562881 PARD3Q8TEW0 1356 aa17.25■□□□□ 0.35
FAN1-204ENST00000562881 NINLQ9Y2I6 1382 aa17.25■□□□□ 0.35
FAN1-204ENST00000562881 EID1Q9Y6B2 187 aa17.24■□□□□ 0.35
FAN1-204ENST00000562881 MYOM1P52179 1685 aa17.23■□□□□ 0.35
FAN1-204ENST00000562881 THEMISQ8N1K5 641 aaPredicted RBP17.23■□□□□ 0.35
FAN1-204ENST00000562881 SIRT1Q96EB6 747 aa17.23■□□□□ 0.35
FAN1-204ENST00000562881 ABCC11Q96J66 1382 aa17.23■□□□□ 0.35
FAN1-204ENST00000562881 SLIT1O75093 1534 aa17.22■□□□□ 0.35
FAN1-204ENST00000562881 NLRP13Q86W25 1043 aa17.22■□□□□ 0.35
FAN1-204ENST00000562881 POGKQ9P215 609 aa17.22■□□□□ 0.35
FAN1-204ENST00000562881 PLEKHG1Q9ULL1 1385 aa17.22■□□□□ 0.35
FAN1-204ENST00000562881 TMC1Q8TDI8 760 aa17.21■□□□□ 0.35
FAN1-204ENST00000562881 SETD1AO15047 1707 aaKnown RBP17.21■□□□□ 0.35
FAN1-204ENST00000562881 ARHGAP23Q9P227 1491 aa17.2■□□□□ 0.34
FAN1-204ENST00000562881 HSPA2P54652 639 aa17.2■□□□□ 0.34
FAN1-204ENST00000562881 ATAD2Q6PL18 1390 aa17.19■□□□□ 0.34
FAN1-204ENST00000562881 NRXN3Q9Y4C0 1643 aa17.19■□□□□ 0.34
FAN1-204ENST00000562881 STK26Q9P289 416 aa17.19■□□□□ 0.34
FAN1-204ENST00000562881 KNDC1Q76NI1 1749 aa17.18■□□□□ 0.34
FAN1-204ENST00000562881 CEBPAP49715 358 aaPredicted RBP17.18■□□□□ 0.34
FAN1-204ENST00000562881 FAM135BQ49AJ0 1406 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms