RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 GPIHBP1Q8IV16 184 aa11.15□□□□□ -0.62
SMG1-206ENST00000562668 PXYLP1Q8TE99 480 aa11.15□□□□□ -0.62
SMG1-206ENST00000562668 IL21Q9HBE4 155 aa11.15□□□□□ -0.62
SMG1-206ENST00000562668 OATP04181 439 aa11.14□□□□□ -0.63
SMG1-206ENST00000562668 FECHP22830 423 aa11.13□□□□□ -0.63
SMG1-206ENST00000562668 METTL3Q86U44 580 aaKnown RBP11.13□□□□□ -0.63
SMG1-206ENST00000562668 PRR14Q9BWN1 585 aa11.13□□□□□ -0.63
SMG1-206ENST00000562668 TULP1O00294 542 aaPredicted RBP11.1□□□□□ -0.63
SMG1-206ENST00000562668 COPS2P61201 443 aa11.08□□□□□ -0.64
SMG1-206ENST00000562668 ZNF516Q92618 1163 aa11.08□□□□□ -0.64
SMG1-206ENST00000562668 CFHP08603 1231 aa11.07□□□□□ -0.64
SMG1-206ENST00000562668 KMT5BQ4FZB7 885 aa11.07□□□□□ -0.64
SMG1-206ENST00000562668 PCDHB3Q9Y5E6 796 aa11.07□□□□□ -0.64
SMG1-206ENST00000562668 SLC10A3P09131 477 aa11.04□□□□□ -0.64
SMG1-206ENST00000562668 ACTN4O43707 911 aaKnown RBP11.03□□□□□ -0.64
SMG1-206ENST00000562668 BLOC1S3Q6QNY0 202 aa11.03□□□□□ -0.64
SMG1-206ENST00000562668 ZPR1O75312 459 aa11.02□□□□□ -0.65
SMG1-206ENST00000562668 NKX2-3Q8TAU0 364 aa11.01□□□□□ -0.65
SMG1-206ENST00000562668 PPP1R18Q6NYC8 613 aa11□□□□□ -0.65
SMG1-206ENST00000562668 NLRP7Q8WX94 980 aa11□□□□□ -0.65
SMG1-206ENST00000562668 DAXXQ9UER7 740 aaPredicted RBP11□□□□□ -0.65
SMG1-206ENST00000562668 MAP2K5Q13163 448 aa10.99□□□□□ -0.65
SMG1-206ENST00000562668 RSPH4AQ5TD94 716 aa10.99□□□□□ -0.65
SMG1-206ENST00000562668 PHOX2BQ99453 314 aa10.99□□□□□ -0.65
SMG1-206ENST00000562668 IRX2Q9BZI1 471 aaPredicted RBP10.98□□□□□ -0.65
SMG1-206ENST00000562668 TLL1O43897 1013 aa10.97□□□□□ -0.65
SMG1-206ENST00000562668 RDH13Q8NBN7 331 aa10.97□□□□□ -0.65
SMG1-206ENST00000562668 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.97□□□□□ -0.65
SMG1-206ENST00000562668 GGCXP38435 758 aa10.96□□□□□ -0.65
SMG1-206ENST00000562668 DDX11L8A8MPP1 907 aa10.95□□□□□ -0.66
SMG1-206ENST00000562668 SULF1Q8IWU6 871 aa10.95□□□□□ -0.66
SMG1-206ENST00000562668 NR1I2O75469 434 aa10.94□□□□□ -0.66
SMG1-206ENST00000562668 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.93□□□□□ -0.66
SMG1-206ENST00000562668 PRKD2Q9BZL6 878 aa10.92□□□□□ -0.66
SMG1-206ENST00000562668 MINK1Q8N4C8 1332 aaPredicted RBP10.91□□□□□ -0.66
SMG1-206ENST00000562668 IRF6O14896 467 aa10.91□□□□□ -0.66
SMG1-206ENST00000562668 LMOD2Q6P5Q4 547 aa10.91□□□□□ -0.66
SMG1-206ENST00000562668 TMUB1Q9BVT8 246 aa10.91□□□□□ -0.66
SMG1-206ENST00000562668 ADH1BP00325 375 aa10.9□□□□□ -0.66
SMG1-206ENST00000562668 CCDC102AQ96A19 550 aa10.9□□□□□ -0.66
SMG1-206ENST00000562668 V9GY48 417 aaPredicted RBP10.9□□□□□ -0.66
SMG1-206ENST00000562668 PUS10Q3MIT2 529 aaKnown RBP10.89□□□□□ -0.67
SMG1-206ENST00000562668 GCGRP47871 477 aa10.87□□□□□ -0.67
SMG1-206ENST00000562668 FUT2Q10981 343 aa10.87□□□□□ -0.67
SMG1-206ENST00000562668 NISCHQ9Y2I1 1504 aa10.86□□□□□ -0.67
SMG1-206ENST00000562668 RNF223E7ERA6 249 aa10.86□□□□□ -0.67
SMG1-206ENST00000562668 S1PR4O95977 384 aa10.86□□□□□ -0.67
SMG1-206ENST00000562668 SCUBE3Q8IX30 993 aa10.86□□□□□ -0.67
SMG1-206ENST00000562668 MDM2Q00987 491 aaPredicted RBP10.85□□□□□ -0.67
SMG1-206ENST00000562668 MORN1Q5T089 497 aa10.85□□□□□ -0.67
SMG1-206ENST00000562668 CD46P15529 392 aa10.84□□□□□ -0.67
SMG1-206ENST00000562668 ATP6V1AP38606 617 aa10.84□□□□□ -0.67
SMG1-206ENST00000562668 ANKLE1Q8NAG6 615 aa10.83□□□□□ -0.68
SMG1-206ENST00000562668 SLC6A16Q9GZN6 736 aa10.83□□□□□ -0.68
SMG1-206ENST00000562668 SPSB2Q99619 263 aa10.82□□□□□ -0.68
SMG1-206ENST00000562668 LAPTM4AQ15012 233 aa10.81□□□□□ -0.68
SMG1-206ENST00000562668 SLC27A5Q9Y2P5 690 aa10.8□□□□□ -0.68
SMG1-206ENST00000562668 PPEF1O14829 653 aaPredicted RBP10.79□□□□□ -0.68
SMG1-206ENST00000562668 CLCN1P35523 988 aa10.79□□□□□ -0.68
SMG1-206ENST00000562668 GRIPAP1Q4V328 841 aa10.79□□□□□ -0.68
SMG1-206ENST00000562668 THAP11Q96EK4 314 aa10.79□□□□□ -0.68
SMG1-206ENST00000562668 GPCPD1Q9NPB8 672 aa10.79□□□□□ -0.68
SMG1-206ENST00000562668 FMNL1O95466 1100 aaPredicted RBP10.78□□□□□ -0.68
SMG1-206ENST00000562668 Q6ZNB5 142 aa10.78□□□□□ -0.68
SMG1-206ENST00000562668 BARGINQ6ZT62 677 aa10.78□□□□□ -0.68
SMG1-206ENST00000562668 ZC3H15Q8WU90 426 aaKnown RBP10.78□□□□□ -0.68
SMG1-206ENST00000562668 EMID1Q96A84 441 aaPredicted RBP10.78□□□□□ -0.68
SMG1-206ENST00000562668 GFRA3O60609 400 aa10.77□□□□□ -0.69
SMG1-206ENST00000562668 ZMYND10O75800 440 aa10.77□□□□□ -0.69
SMG1-206ENST00000562668 SLC19A1P41440 591 aa10.77□□□□□ -0.69
SMG1-206ENST00000562668 KRI1Q8N9T8 703 aaKnown RBP10.76□□□□□ -0.69
SMG1-206ENST00000562668 FAM217BQ9NTX9 383 aaPredicted RBP10.76□□□□□ -0.69
SMG1-206ENST00000562668 SALL2Q9Y467 1007 aaPredicted RBP10.76□□□□□ -0.69
SMG1-206ENST00000562668 NRG2O14511 850 aaPredicted RBP10.75□□□□□ -0.69
SMG1-206ENST00000562668 KDM4AO75164 1064 aa10.75□□□□□ -0.69
SMG1-206ENST00000562668 USP46P62068 366 aa10.74□□□□□ -0.69
SMG1-206ENST00000562668 BRICD5Q6PL45 260 aa10.74□□□□□ -0.69
SMG1-206ENST00000562668 PLA2G2CQ5R387 149 aa10.73□□□□□ -0.69
SMG1-206ENST00000562668 RNF19BQ6ZMZ0 732 aa10.73□□□□□ -0.69
SMG1-206ENST00000562668 PDZRN3Q9UPQ7 1066 aa10.73□□□□□ -0.69
SMG1-206ENST00000562668 Q3C1V9 767 aa10.72□□□□□ -0.69
SMG1-206ENST00000562668 MSS51Q4VC12 460 aa10.72□□□□□ -0.69
SMG1-206ENST00000562668 SPRYD7Q5W111 196 aa10.72□□□□□ -0.69
SMG1-206ENST00000562668 LIAT1Q6ZQX7 453 aa10.72□□□□□ -0.69
SMG1-206ENST00000562668 FAM160A2Q8N612 972 aaPredicted RBP10.72□□□□□ -0.69
SMG1-206ENST00000562668 PRDM9Q9NQV7 894 aa10.72□□□□□ -0.69
SMG1-206ENST00000562668 HOXA2O43364 376 aa10.71□□□□□ -0.69
SMG1-206ENST00000562668 TTLL12Q14166 644 aaPredicted RBP10.7□□□□□ -0.7
SMG1-206ENST00000562668 AMHR2Q16671 573 aa10.7□□□□□ -0.7
SMG1-206ENST00000562668 ZNF598Q86UK7 904 aaKnown RBP10.7□□□□□ -0.7
SMG1-206ENST00000562668 REPIN1Q9BWE0 567 aaKnown RBP10.7□□□□□ -0.7
SMG1-206ENST00000562668 FCF1Q9Y324 198 aaKnown RBP10.7□□□□□ -0.7
SMG1-206ENST00000562668 ZNF697Q5TEC3 545 aa10.69□□□□□ -0.7
SMG1-206ENST00000562668 TRIM67Q6ZTA4 783 aa10.69□□□□□ -0.7
SMG1-206ENST00000562668 HLA-CQ95604 372 aa10.69□□□□□ -0.7
SMG1-206ENST00000562668 NUTM1Q86Y26 1132 aa10.66□□□□□ -0.7
SMG1-206ENST00000562668 LCE2BO14633 110 aa10.65□□□□□ -0.7
SMG1-206ENST00000562668 GIGYF2Q6Y7W6 1299 aaKnown RBP10.65□□□□□ -0.7
SMG1-206ENST00000562668 SSTR3P32745 418 aaPredicted RBP10.64□□□□□ -0.71
SMG1-206ENST00000562668 RPIAP49247 311 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms