RNA–Protein interactions for RNA: ENST00000562543.5

TCF4-213, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-213ENST00000562543 TOM1O60784 492 aa11.17□□□□□ -0.62
TCF4-213ENST00000562543 PPP1R37O75864 691 aa11.17□□□□□ -0.62
TCF4-213ENST00000562543 MLECQ14165 292 aa11.17□□□□□ -0.62
TCF4-213ENST00000562543 UPF1Q92900 1129 aaKnown RBP eCLIP11.17□□□□□ -0.62
TCF4-213ENST00000562543 EFCAB5A4FU69 1503 aa11.17□□□□□ -0.62
TCF4-213ENST00000562543 IFFO2Q5TF58 517 aa11.16□□□□□ -0.62
TCF4-213ENST00000562543 FHOD3Q2V2M9 1422 aa11.16□□□□□ -0.62
TCF4-213ENST00000562543 CAMSAP1Q5T5Y3 1602 aa11.16□□□□□ -0.62
TCF4-213ENST00000562543 C3P01024 1663 aa11.14□□□□□ -0.63
TCF4-213ENST00000562543 ZNF316A6NFI3 1004 aaPredicted RBP11.13□□□□□ -0.63
TCF4-213ENST00000562543 NUDT7P0C024 238 aa11.13□□□□□ -0.63
TCF4-213ENST00000562543 DENND4BO75064 1496 aaPredicted RBP11.12□□□□□ -0.63
TCF4-213ENST00000562543 ABCA8O94911 1581 aa11.11□□□□□ -0.63
TCF4-213ENST00000562543 ANKRD13DQ6ZTN6 518 aa11.11□□□□□ -0.63
TCF4-213ENST00000562543 RNF166Q96A37 237 aaPredicted RBP11.11□□□□□ -0.63
TCF4-213ENST00000562543 MAGI2Q86UL8 1455 aa11.11□□□□□ -0.63
TCF4-213ENST00000562543 CPS1P31327 1500 aa11.1□□□□□ -0.63
TCF4-213ENST00000562543 UGGT2Q9NYU1 1516 aa11.1□□□□□ -0.63
TCF4-213ENST00000562543 MYT1LQ9UL68 1186 aa11.09□□□□□ -0.63
TCF4-213ENST00000562543 PTPRKQ15262 1439 aa11.09□□□□□ -0.63
TCF4-213ENST00000562543 TMC2Q8TDI7 906 aa11.07□□□□□ -0.64
TCF4-213ENST00000562543 PCDHGA4Q9Y5G9 962 aa11.07□□□□□ -0.64
TCF4-213ENST00000562543 TRAPPC8Q9Y2L5 1435 aa11.07□□□□□ -0.64
TCF4-213ENST00000562543 NCKAP5LQ9HCH0 1330 aa11.07□□□□□ -0.64
TCF4-213ENST00000562543 PLA2R1Q13018 1463 aa11.06□□□□□ -0.64
TCF4-213ENST00000562543 TCOF1Q13428 1488 aaKnown RBP11.06□□□□□ -0.64
TCF4-213ENST00000562543 HECW1Q76N89 1606 aa11.06□□□□□ -0.64
TCF4-213ENST00000562543 IGF1RP08069 1367 aa11.06□□□□□ -0.64
TCF4-213ENST00000562543 LHX6Q9UPM6 363 aa11.06□□□□□ -0.64
TCF4-213ENST00000562543 AXIN2Q9Y2T1 843 aa11.06□□□□□ -0.64
TCF4-213ENST00000562543 C9orf84Q5VXU9 1444 aa11.04□□□□□ -0.64
TCF4-213ENST00000562543 POTEEQ6S8J3 1075 aa11.04□□□□□ -0.64
TCF4-213ENST00000562543 CFAP74Q9C0B2 1584 aa11.03□□□□□ -0.64
TCF4-213ENST00000562543 ZNF142P52746 1687 aaPredicted RBP11.03□□□□□ -0.64
TCF4-213ENST00000562543 ATP10AO60312 1499 aa11.01□□□□□ -0.65
TCF4-213ENST00000562543 RAPGEF2Q9Y4G8 1499 aa11.01□□□□□ -0.65
TCF4-213ENST00000562543 SLC34A2O95436 690 aa11.01□□□□□ -0.65
TCF4-213ENST00000562543 LSM11P83369 360 aaKnown RBP eCLIP11.01□□□□□ -0.65
TCF4-213ENST00000562543 SUPT6HQ7KZ85 1726 aaKnown RBP11□□□□□ -0.65
TCF4-213ENST00000562543 SHANK2Q9UPX8 1470 aa11□□□□□ -0.65
TCF4-213ENST00000562543 SETBP1Q9Y6X0 1596 aa10.98□□□□□ -0.65
TCF4-213ENST00000562543 RNF17Q9BXT8 1623 aaKnown RBP10.98□□□□□ -0.65
TCF4-213ENST00000562543 LRRC7Q96NW7 1537 aa10.96□□□□□ -0.65
TCF4-213ENST00000562543 ATP10BO94823 1461 aa10.96□□□□□ -0.65
TCF4-213ENST00000562543 CHGAP10645 457 aaKnown RBP10.96□□□□□ -0.65
TCF4-213ENST00000562543 MYO3AQ8NEV4 1616 aa10.95□□□□□ -0.66
TCF4-213ENST00000562543 NPATQ14207 1427 aa10.95□□□□□ -0.66
TCF4-213ENST00000562543 HS6ST3Q8IZP7 471 aa10.95□□□□□ -0.66
TCF4-213ENST00000562543 VWDEQ8N2E2 1590 aa10.94□□□□□ -0.66
TCF4-213ENST00000562543 CARMIL1Q5VZK9 1371 aa10.94□□□□□ -0.66
TCF4-213ENST00000562543 PLPP6Q8IY26 295 aa10.94□□□□□ -0.66
TCF4-213ENST00000562543 NEURL4Q96JN8 1562 aa10.93□□□□□ -0.66
TCF4-213ENST00000562543 CEP170BQ9Y4F5 1589 aaPredicted RBP10.93□□□□□ -0.66
TCF4-213ENST00000562543 POLR1AO95602 1720 aaPredicted RBP10.92□□□□□ -0.66
TCF4-213ENST00000562543 REREQ9P2R6 1566 aa10.92□□□□□ -0.66
TCF4-213ENST00000562543 DSG2Q14126 1118 aa10.92□□□□□ -0.66
TCF4-213ENST00000562543 NKX1-1Q15270 411 aaPredicted RBP10.92□□□□□ -0.66
TCF4-213ENST00000562543 AGLP35573 1532 aa10.92□□□□□ -0.66
TCF4-213ENST00000562543 PTGER2P43116 358 aa10.91□□□□□ -0.66
TCF4-213ENST00000562543 FOXK1P85037 733 aa10.91□□□□□ -0.66
TCF4-213ENST00000562543 MROH2AA6NES4 1674 aa10.91□□□□□ -0.66
TCF4-213ENST00000562543 KIF27Q86VH2 1401 aa10.91□□□□□ -0.66
TCF4-213ENST00000562543 PBX2P40425 430 aa10.9□□□□□ -0.66
TCF4-213ENST00000562543 PTCD2Q8WV60 388 aaKnown RBP10.9□□□□□ -0.66
TCF4-213ENST00000562543 GPHNQ9NQX3 736 aaPredicted RBP10.9□□□□□ -0.66
TCF4-213ENST00000562543 RBM33Q96EV2 1170 aaKnown RBP10.89□□□□□ -0.67
TCF4-213ENST00000562543 SYNMO15061 1565 aa10.89□□□□□ -0.67
TCF4-213ENST00000562543 PSEN2P49810 448 aa10.88□□□□□ -0.67
TCF4-213ENST00000562543 TRIM52Q96A61 297 aa10.88□□□□□ -0.67
TCF4-213ENST00000562543 CNTLNQ9NXG0 1405 aa10.88□□□□□ -0.67
TCF4-213ENST00000562543 LRP5O75197 1615 aa10.87□□□□□ -0.67
TCF4-213ENST00000562543 CDK12Q9NYV4 1490 aaPredicted RBP10.87□□□□□ -0.67
TCF4-213ENST00000562543 STRCP1A6NGW2 1772 aa10.87□□□□□ -0.67
TCF4-213ENST00000562543 DIP2CQ9Y2E4 1556 aa10.86□□□□□ -0.67
TCF4-213ENST00000562543 ARID3CA6NKF2 412 aa10.86□□□□□ -0.67
TCF4-213ENST00000562543 ARHGAP33O14559 1287 aa10.86□□□□□ -0.67
TCF4-213ENST00000562543 DMRTA1Q5VZB9 504 aa10.86□□□□□ -0.67
TCF4-213ENST00000562543 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.85□□□□□ -0.67
TCF4-213ENST00000562543 ADGRD1Q6QNK2 874 aa10.85□□□□□ -0.67
TCF4-213ENST00000562543 GOLGA3Q08378 1498 aa10.85□□□□□ -0.67
TCF4-213ENST00000562543 RAPGEF6Q8TEU7 1601 aa10.84□□□□□ -0.67
TCF4-213ENST00000562543 SCAPERQ9BY12 1400 aa10.84□□□□□ -0.67
TCF4-213ENST00000562543 KDM5CP41229 1560 aa10.82□□□□□ -0.68
TCF4-213ENST00000562543 DNMT1P26358 1616 aaKnown RBP10.82□□□□□ -0.68
TCF4-213ENST00000562543 ABCA6Q8N139 1617 aa10.81□□□□□ -0.68
TCF4-213ENST00000562543 ESF1Q9H501 851 aaKnown RBP10.81□□□□□ -0.68
TCF4-213ENST00000562543 FAM135BQ49AJ0 1406 aa10.81□□□□□ -0.68
TCF4-213ENST00000562543 CDK13Q14004 1512 aaKnown RBP10.8□□□□□ -0.68
TCF4-213ENST00000562543 CTTNBP2Q8WZ74 1663 aa10.8□□□□□ -0.68
TCF4-213ENST00000562543 PSDA5PKW4 1024 aaPredicted RBP10.79□□□□□ -0.68
TCF4-213ENST00000562543 TBC1D12O60347 775 aa10.78□□□□□ -0.68
TCF4-213ENST00000562543 ZNF772Q68DY9 489 aaPredicted RBP10.78□□□□□ -0.68
TCF4-213ENST00000562543 XIRP1Q702N8 1843 aaKnown RBP10.78□□□□□ -0.68
TCF4-213ENST00000562543 LRP6O75581 1613 aa10.77□□□□□ -0.68
TCF4-213ENST00000562543 ROBO1Q9Y6N7 1651 aa10.77□□□□□ -0.69
TCF4-213ENST00000562543 A2ML1A8K2U0 1454 aa10.77□□□□□ -0.69
TCF4-213ENST00000562543 PPP4R3BQ5MIZ7 849 aa10.77□□□□□ -0.69
TCF4-213ENST00000562543 ZMYM3Q14202 1370 aa10.77□□□□□ -0.69
TCF4-213ENST00000562543 ZNF518AQ6AHZ1 1483 aa10.76□□□□□ -0.69
TCF4-213ENST00000562543 HRO43593 1189 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms