RNA–Protein interactions for RNA: ENST00000562510.1

SNX29-201, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 536 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-201ENST00000562510 PTPRKQ15262 1439 aa11.23□□□□□ -0.61
SNX29-201ENST00000562510 MLECQ14165 292 aa11.22□□□□□ -0.61
SNX29-201ENST00000562510 YEATS2Q9ULM3 1422 aa11.22□□□□□ -0.61
SNX29-201ENST00000562510 ZMYM4Q5VZL5 1548 aa11.21□□□□□ -0.61
SNX29-201ENST00000562510 CAMSAP2Q08AD1 1489 aa11.21□□□□□ -0.61
SNX29-201ENST00000562510 MFRPQ9BY79 579 aa11.21□□□□□ -0.61
SNX29-201ENST00000562510 PREX2Q70Z35 1606 aa11.2□□□□□ -0.62
SNX29-201ENST00000562510 ABCC5O15440 1437 aa11.2□□□□□ -0.62
SNX29-201ENST00000562510 DISP3Q9P2K9 1392 aa11.2□□□□□ -0.62
SNX29-201ENST00000562510 EFCAB2Q5VUJ9 269 aa11.2□□□□□ -0.62
SNX29-201ENST00000562510 OTUD5Q96G74 571 aa11.2□□□□□ -0.62
SNX29-201ENST00000562510 CDC42BPBQ9Y5S2 1711 aa11.2□□□□□ -0.62
SNX29-201ENST00000562510 ZFYVE16Q7Z3T8 1539 aa11.19□□□□□ -0.62
SNX29-201ENST00000562510 DAPK1P53355 1430 aa11.19□□□□□ -0.62
SNX29-201ENST00000562510 SCAPERQ9BY12 1400 aa11.19□□□□□ -0.62
SNX29-201ENST00000562510 MS4A4AQ96JQ5 239 aa11.19□□□□□ -0.62
SNX29-201ENST00000562510 ARHGAP5Q13017 1502 aa11.19□□□□□ -0.62
SNX29-201ENST00000562510 ATP10AO60312 1499 aa11.19□□□□□ -0.62
SNX29-201ENST00000562510 SETD5Q9C0A6 1442 aa11.18□□□□□ -0.62
SNX29-201ENST00000562510 MYO5CQ9NQX4 1742 aa11.18□□□□□ -0.62
SNX29-201ENST00000562510 DNMT1P26358 1616 aaKnown RBP11.18□□□□□ -0.62
SNX29-201ENST00000562510 HRCP23327 699 aa11.18□□□□□ -0.62
SNX29-201ENST00000562510 RSPH4AQ5TD94 716 aa11.18□□□□□ -0.62
SNX29-201ENST00000562510 ILDR2Q71H61 639 aa11.18□□□□□ -0.62
SNX29-201ENST00000562510 BOLA1Q9Y3E2 137 aa11.18□□□□□ -0.62
SNX29-201ENST00000562510 KIAA1107Q9UPP5 1409 aa11.18□□□□□ -0.62
SNX29-201ENST00000562510 SAMD9LQ8IVG5 1584 aa11.17□□□□□ -0.62
SNX29-201ENST00000562510 CFAP74Q9C0B2 1584 aa11.17□□□□□ -0.62
SNX29-201ENST00000562510 HNRNPMP52272 730 aaKnown RBP eCLIP11.17□□□□□ -0.62
SNX29-201ENST00000562510 C3orf67Q6ZVT6 689 aa11.17□□□□□ -0.62
SNX29-201ENST00000562510 FBXO22Q8NEZ5 403 aa11.17□□□□□ -0.62
SNX29-201ENST00000562510 CHIC2Q9UKJ5 165 aa11.17□□□□□ -0.62
SNX29-201ENST00000562510 PLEKHH2Q8IVE3 1493 aa11.17□□□□□ -0.62
SNX29-201ENST00000562510 MBD5Q9P267 1494 aa11.17□□□□□ -0.62
SNX29-201ENST00000562510 RIMS1Q86UR5 1692 aaKnown RBP11.17□□□□□ -0.62
SNX29-201ENST00000562510 ROCK1Q13464 1354 aa11.16□□□□□ -0.62
SNX29-201ENST00000562510 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.16□□□□□ -0.62
SNX29-201ENST00000562510 HFM1A2PYH4 1435 aa11.16□□□□□ -0.62
SNX29-201ENST00000562510 C9orf84Q5VXU9 1444 aa11.16□□□□□ -0.62
SNX29-201ENST00000562510 RAB3GAP2Q9H2M9 1393 aa11.16□□□□□ -0.62
SNX29-201ENST00000562510 RICTORQ6R327 1708 aa11.15□□□□□ -0.62
SNX29-201ENST00000562510 ARHGEF12Q9NZN5 1544 aa11.15□□□□□ -0.62
SNX29-201ENST00000562510 CEBPAP49715 358 aaPredicted RBP11.15□□□□□ -0.62
SNX29-201ENST00000562510 NAIPQ13075 1403 aa11.15□□□□□ -0.62
SNX29-201ENST00000562510 ARHGEF5Q12774 1597 aa11.15□□□□□ -0.62
SNX29-201ENST00000562510 TSPY4P0CV99 314 aa11.14□□□□□ -0.63
SNX29-201ENST00000562510 TSPY10P0CW01 314 aa11.14□□□□□ -0.63
SNX29-201ENST00000562510 RRP7BPQ9NSQ0 103 aa11.14□□□□□ -0.63
SNX29-201ENST00000562510 UHRF1BP1Q6BDS2 1440 aa11.14□□□□□ -0.63
SNX29-201ENST00000562510 PTPRTO14522 1441 aa11.13□□□□□ -0.63
SNX29-201ENST00000562510 NKX1-1Q15270 411 aaPredicted RBP11.13□□□□□ -0.63
SNX29-201ENST00000562510 CCER1Q8TC90 406 aaPredicted RBP11.13□□□□□ -0.63
SNX29-201ENST00000562510 ADGRL2O95490 1459 aa11.12□□□□□ -0.63
SNX29-201ENST00000562510 CCDC141Q6ZP82 1450 aa11.12□□□□□ -0.63
SNX29-201ENST00000562510 SHANK2Q9UPX8 1470 aa11.12□□□□□ -0.63
SNX29-201ENST00000562510 NCOA1Q15788 1441 aa11.12□□□□□ -0.63
SNX29-201ENST00000562510 SLAIN1Q8ND83 568 aa11.12□□□□□ -0.63
SNX29-201ENST00000562510 SYCP2Q9BX26 1530 aa11.12□□□□□ -0.63
SNX29-201ENST00000562510 ABCC1P33527 1531 aa11.11□□□□□ -0.63
SNX29-201ENST00000562510 AFAP1Q8N556 730 aa11.11□□□□□ -0.63
SNX29-201ENST00000562510 ZNF518AQ6AHZ1 1483 aa11.11□□□□□ -0.63
SNX29-201ENST00000562510 MICALL2Q8IY33 904 aa11.1□□□□□ -0.63
SNX29-201ENST00000562510 ESF1Q9H501 851 aaKnown RBP11.1□□□□□ -0.63
SNX29-201ENST00000562510 RYDENQ9NUL5 291 aaKnown RBP11.1□□□□□ -0.63
SNX29-201ENST00000562510 ANKRD30AQ9BXX3 1397 aa11.1□□□□□ -0.63
SNX29-201ENST00000562510 CROCC2H7BZ55 1655 aa11.1□□□□□ -0.63
SNX29-201ENST00000562510 TRAPPC8Q9Y2L5 1435 aa11.09□□□□□ -0.63
SNX29-201ENST00000562510 DHX57Q6P158 1386 aaKnown RBP11.08□□□□□ -0.64
SNX29-201ENST00000562510 ACIN1Q9UKV3 1341 aaKnown RBP11.08□□□□□ -0.64
SNX29-201ENST00000562510 MAST1Q9Y2H9 1570 aa11.07□□□□□ -0.64
SNX29-201ENST00000562510 IQSEC2Q5JU85 1478 aa11.07□□□□□ -0.64
SNX29-201ENST00000562510 ZEB1P37275 1124 aaPredicted RBP11.07□□□□□ -0.64
SNX29-201ENST00000562510 MYT1LQ9UL68 1186 aa11.07□□□□□ -0.64
SNX29-201ENST00000562510 GCC2Q8IWJ2 1684 aa11.07□□□□□ -0.64
SNX29-201ENST00000562510 SIGLEC1Q9BZZ2 1709 aa11.06□□□□□ -0.64
SNX29-201ENST00000562510 ADGBQ8N7X0 1667 aa11.06□□□□□ -0.64
SNX29-201ENST00000562510 PPP1R37O75864 691 aa11.06□□□□□ -0.64
SNX29-201ENST00000562510 BBXQ8WY36 941 aaPredicted RBP11.06□□□□□ -0.64
SNX29-201ENST00000562510 SPAG9O60271 1321 aaKnown RBP11.06□□□□□ -0.64
SNX29-201ENST00000562510 MLH3Q9UHC1 1453 aa11.06□□□□□ -0.64
SNX29-201ENST00000562510 RTEL1-TNFRSF6BF6WH68 1400 aa11.05□□□□□ -0.64
SNX29-201ENST00000562510 TMEM121BQ9BXQ6 578 aaPredicted RBP11.05□□□□□ -0.64
SNX29-201ENST00000562510 CNTLNQ9NXG0 1405 aa11.05□□□□□ -0.64
SNX29-201ENST00000562510 CLSPNQ9HAW4 1339 aa11.05□□□□□ -0.64
SNX29-201ENST00000562510 PREX1Q8TCU6 1659 aa11.04□□□□□ -0.64
SNX29-201ENST00000562510 KIF15Q9NS87 1388 aa11.04□□□□□ -0.64
SNX29-201ENST00000562510 ANKRD50Q9ULJ7 1429 aa11.04□□□□□ -0.64
SNX29-201ENST00000562510 FER1L4A9Z1Z3 1794 aa11.04□□□□□ -0.64
SNX29-201ENST00000562510 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.04□□□□□ -0.64
SNX29-201ENST00000562510 AGLP35573 1532 aa11.04□□□□□ -0.64
SNX29-201ENST00000562510 KDM5CP41229 1560 aa11.03□□□□□ -0.64
SNX29-201ENST00000562510 REREQ9P2R6 1566 aa11.03□□□□□ -0.64
SNX29-201ENST00000562510 PLXNC1O60486 1568 aa11.02□□□□□ -0.65
SNX29-201ENST00000562510 LTBP4Q8N2S1 1624 aa11.02□□□□□ -0.65
SNX29-201ENST00000562510 NPATQ14207 1427 aa11.01□□□□□ -0.65
SNX29-201ENST00000562510 GTPBP6O43824 516 aaPredicted RBP11.01□□□□□ -0.65
SNX29-201ENST00000562510 TRIM52Q96A61 297 aa11.01□□□□□ -0.65
SNX29-201ENST00000562510 SETD1BQ9UPS6 1966 aaKnown RBP11.01□□□□□ -0.65
SNX29-201ENST00000562510 STRCQ7RTU9 1775 aa11□□□□□ -0.65
SNX29-201ENST00000562510 SPATA31D1Q6ZQQ2 1576 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms