RNA–Protein interactions for RNA: ENST00000562065.1

LINC01243-201, Transcript of long intergenic non-protein coding RNA 1243, humanhuman

TSL 1 (best) BASIC

Gene LINC01243, Length 721 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01243-201ENST00000562065 HIC1Q14526 733 aa13.36□□□□□ -0.27
LINC01243-201ENST00000562065 NKX2-3Q8TAU0 364 aa13.36□□□□□ -0.27
LINC01243-201ENST00000562065 PCDHB3Q9Y5E6 796 aa13.36□□□□□ -0.27
LINC01243-201ENST00000562065 PPP1R18Q6NYC8 613 aa13.35□□□□□ -0.27
LINC01243-201ENST00000562065 KDM2AQ9Y2K7 1162 aa13.34□□□□□ -0.27
LINC01243-201ENST00000562065 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.32□□□□□ -0.28
LINC01243-201ENST00000562065 OATP04181 439 aa13.32□□□□□ -0.28
LINC01243-201ENST00000562065 KMT5BQ4FZB7 885 aa13.32□□□□□ -0.28
LINC01243-201ENST00000562065 CFHP08603 1231 aa13.31□□□□□ -0.28
LINC01243-201ENST00000562065 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.31□□□□□ -0.28
LINC01243-201ENST00000562065 GNPATO15228 680 aa13.3□□□□□ -0.28
LINC01243-201ENST00000562065 BLOC1S3Q6QNY0 202 aa13.3□□□□□ -0.28
LINC01243-201ENST00000562065 PXYLP1Q8TE99 480 aa13.3□□□□□ -0.28
LINC01243-201ENST00000562065 PRKD2Q9BZL6 878 aa13.3□□□□□ -0.28
LINC01243-201ENST00000562065 ZPR1O75312 459 aa13.29□□□□□ -0.28
LINC01243-201ENST00000562065 FECHP22830 423 aa13.29□□□□□ -0.28
LINC01243-201ENST00000562065 GGCXP38435 758 aa13.28□□□□□ -0.28
LINC01243-201ENST00000562065 METTL3Q86U44 580 aaKnown RBP13.27□□□□□ -0.29
LINC01243-201ENST00000562065 SLC10A3P09131 477 aa13.25□□□□□ -0.29
LINC01243-201ENST00000562065 Q6ZNB5 142 aa13.25□□□□□ -0.29
LINC01243-201ENST00000562065 GPIHBP1Q8IV16 184 aa13.25□□□□□ -0.29
LINC01243-201ENST00000562065 GPR37O15354 613 aa13.24□□□□□ -0.29
LINC01243-201ENST00000562065 ACTN4O43707 911 aaKnown RBP13.24□□□□□ -0.29
LINC01243-201ENST00000562065 TLL1O43897 1013 aa13.24□□□□□ -0.29
LINC01243-201ENST00000562065 NLRP7Q8WX94 980 aa13.22□□□□□ -0.29
LINC01243-201ENST00000562065 RSPH4AQ5TD94 716 aa13.21□□□□□ -0.29
LINC01243-201ENST00000562065 VSIG10Q8N0Z9 540 aa13.2□□□□□ -0.3
LINC01243-201ENST00000562065 RDH13Q8NBN7 331 aa13.19□□□□□ -0.3
LINC01243-201ENST00000562065 GFRA3O60609 400 aa13.18□□□□□ -0.3
LINC01243-201ENST00000562065 V9GY48 417 aaPredicted RBP13.18□□□□□ -0.3
LINC01243-201ENST00000562065 TULP1O00294 542 aaPredicted RBP13.17□□□□□ -0.3
LINC01243-201ENST00000562065 DDX11L8A8MPP1 907 aa13.16□□□□□ -0.3
LINC01243-201ENST00000562065 NR1I2O75469 434 aa13.16□□□□□ -0.3
LINC01243-201ENST00000562065 TMUB1Q9BVT8 246 aa13.16□□□□□ -0.3
LINC01243-201ENST00000562065 DAXXQ9UER7 740 aaPredicted RBP13.16□□□□□ -0.3
LINC01243-201ENST00000562065 LAPTM4AQ15012 233 aa13.15□□□□□ -0.3
LINC01243-201ENST00000562065 PUS10Q3MIT2 529 aaKnown RBP13.15□□□□□ -0.3
LINC01243-201ENST00000562065 RNF223E7ERA6 249 aa13.14□□□□□ -0.31
LINC01243-201ENST00000562065 S1PR4O95977 384 aa13.13□□□□□ -0.31
LINC01243-201ENST00000562065 PPEF1O14829 653 aaPredicted RBP13.11□□□□□ -0.31
LINC01243-201ENST00000562065 ADH1BP00325 375 aa13.11□□□□□ -0.31
LINC01243-201ENST00000562065 PHOX2BQ99453 314 aa13.1□□□□□ -0.31
LINC01243-201ENST00000562065 SULF1Q8IWU6 871 aa13.08□□□□□ -0.32
LINC01243-201ENST00000562065 SCUBE3Q8IX30 993 aa13.08□□□□□ -0.32
LINC01243-201ENST00000562065 CCDC180Q9P1Z9 1646 aa13.08□□□□□ -0.32
LINC01243-201ENST00000562065 NRG2O14511 850 aaPredicted RBP13.07□□□□□ -0.32
LINC01243-201ENST00000562065 SLC19A1P41440 591 aa13.07□□□□□ -0.32
LINC01243-201ENST00000562065 SLC6A16Q9GZN6 736 aa13.07□□□□□ -0.32
LINC01243-201ENST00000562065 PDZRN3Q9UPQ7 1066 aa13.07□□□□□ -0.32
LINC01243-201ENST00000562065 FUT2Q10981 343 aa13.06□□□□□ -0.32
LINC01243-201ENST00000562065 ANKLE1Q8NAG6 615 aa13.05□□□□□ -0.32
LINC01243-201ENST00000562065 SPSB2Q99619 263 aa13.04□□□□□ -0.32
LINC01243-201ENST00000562065 MAP2K5Q13163 448 aa13.03□□□□□ -0.32
LINC01243-201ENST00000562065 ATP6V1AP38606 617 aa13.02□□□□□ -0.33
LINC01243-201ENST00000562065 GCGRP47871 477 aa13.01□□□□□ -0.33
LINC01243-201ENST00000562065 MORN1Q5T089 497 aa13.01□□□□□ -0.33
LINC01243-201ENST00000562065 TRAF7Q6Q0C0 670 aa13.01□□□□□ -0.33
LINC01243-201ENST00000562065 EMID1Q96A84 441 aaPredicted RBP13□□□□□ -0.33
LINC01243-201ENST00000562065 SPRYD7Q5W111 196 aa12.98□□□□□ -0.33
LINC01243-201ENST00000562065 LIAT1Q6ZQX7 453 aa12.98□□□□□ -0.33
LINC01243-201ENST00000562065 SLC27A5Q9Y2P5 690 aa12.98□□□□□ -0.33
LINC01243-201ENST00000562065 IRF6O14896 467 aa12.97□□□□□ -0.33
LINC01243-201ENST00000562065 FMNL1O95466 1100 aaPredicted RBP12.96□□□□□ -0.33
LINC01243-201ENST00000562065 MDM2Q00987 491 aaPredicted RBP12.96□□□□□ -0.33
LINC01243-201ENST00000562065 ZNF697Q5TEC3 545 aa12.96□□□□□ -0.33
LINC01243-201ENST00000562065 LCE2BO14633 110 aa12.95□□□□□ -0.34
LINC01243-201ENST00000562065 ZNF598Q86UK7 904 aaKnown RBP12.95□□□□□ -0.34
LINC01243-201ENST00000562065 MINK1Q8N4C8 1332 aaPredicted RBP12.94□□□□□ -0.34
LINC01243-201ENST00000562065 GRIPAP1Q4V328 841 aa12.94□□□□□ -0.34
LINC01243-201ENST00000562065 PLA2G2CQ5R387 149 aa12.94□□□□□ -0.34
LINC01243-201ENST00000562065 CCDC102AQ96A19 550 aa12.94□□□□□ -0.34
LINC01243-201ENST00000562065 ABCC9O60706 1549 aa12.93□□□□□ -0.34
LINC01243-201ENST00000562065 TRIM67Q6ZTA4 783 aa12.92□□□□□ -0.34
LINC01243-201ENST00000562065 THAP11Q96EK4 314 aa12.92□□□□□ -0.34
LINC01243-201ENST00000562065 CD46P15529 392 aa12.91□□□□□ -0.34
LINC01243-201ENST00000562065 PRDM9Q9NQV7 894 aa12.91□□□□□ -0.34
LINC01243-201ENST00000562065 FCF1Q9Y324 198 aaKnown RBP12.91□□□□□ -0.34
LINC01243-201ENST00000562065 TNFRSF10AO00220 468 aa12.9□□□□□ -0.34
LINC01243-201ENST00000562065 RNF19BQ6ZMZ0 732 aa12.9□□□□□ -0.34
LINC01243-201ENST00000562065 KRI1Q8N9T8 703 aaKnown RBP12.89□□□□□ -0.35
LINC01243-201ENST00000562065 LMOD2Q6P5Q4 547 aa12.88□□□□□ -0.35
LINC01243-201ENST00000562065 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.88□□□□□ -0.35
LINC01243-201ENST00000562065 FAM160A2Q8N612 972 aaPredicted RBP12.88□□□□□ -0.35
LINC01243-201ENST00000562065 KDM4AO75164 1064 aa12.87□□□□□ -0.35
LINC01243-201ENST00000562065 PKDCCQ504Y2 493 aa12.87□□□□□ -0.35
LINC01243-201ENST00000562065 BRICD5Q6PL45 260 aa12.87□□□□□ -0.35
LINC01243-201ENST00000562065 FOXC1Q12948 553 aa12.85□□□□□ -0.35
LINC01243-201ENST00000562065 Q3C1V9 767 aa12.85□□□□□ -0.35
LINC01243-201ENST00000562065 SALL2Q9Y467 1007 aaPredicted RBP12.85□□□□□ -0.35
LINC01243-201ENST00000562065 CLCN1P35523 988 aa12.84□□□□□ -0.35
LINC01243-201ENST00000562065 PRR20EP86478 221 aa12.84□□□□□ -0.35
LINC01243-201ENST00000562065 PRR20CP86479 221 aa12.84□□□□□ -0.35
LINC01243-201ENST00000562065 PRR20DP86480 221 aa12.84□□□□□ -0.35
LINC01243-201ENST00000562065 PRR20BP86481 221 aa12.84□□□□□ -0.35
LINC01243-201ENST00000562065 PRR20AP86496 221 aa12.84□□□□□ -0.35
LINC01243-201ENST00000562065 GPCPD1Q9NPB8 672 aa12.84□□□□□ -0.35
LINC01243-201ENST00000562065 FAM187AA6NFU0 413 aa12.83□□□□□ -0.36
LINC01243-201ENST00000562065 GDF9O60383 454 aa12.82□□□□□ -0.36
LINC01243-201ENST00000562065 HLA-CQ95604 372 aa12.82□□□□□ -0.36
LINC01243-201ENST00000562065 MSS51Q4VC12 460 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms