RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 MYO3AQ8NEV4 1616 aa16.36■□□□□ 0.21
PCAT1-202ENST00000561978 PKD2Q13563 968 aa16.33■□□□□ 0.21
PCAT1-202ENST00000561978 RPRD2Q5VT52 1461 aaKnown RBP16.33■□□□□ 0.2
PCAT1-202ENST00000561978 CAPN15O75808 1086 aa16.33■□□□□ 0.2
PCAT1-202ENST00000561978 DDX10Q13206 875 aaKnown RBP16.33■□□□□ 0.2
PCAT1-202ENST00000561978 NOS1P29475 1434 aa16.31■□□□□ 0.2
PCAT1-202ENST00000561978 SYNMO15061 1565 aa16.31■□□□□ 0.2
PCAT1-202ENST00000561978 CEP170BQ9Y4F5 1589 aaPredicted RBP16.31■□□□□ 0.2
PCAT1-202ENST00000561978 GTF3C3Q9Y5Q9 886 aa16.3■□□□□ 0.2
PCAT1-202ENST00000561978 UGGT1Q9NYU2 1555 aa16.29■□□□□ 0.2
PCAT1-202ENST00000561978 IDI1Q13907 227 aa16.29■□□□□ 0.2
PCAT1-202ENST00000561978 L3MBTL2Q969R5 705 aa16.29■□□□□ 0.2
PCAT1-202ENST00000561978 ZNF142P52746 1687 aaPredicted RBP16.29■□□□□ 0.2
PCAT1-202ENST00000561978 A2ML1A8K2U0 1454 aa16.28■□□□□ 0.2
PCAT1-202ENST00000561978 NLRP1Q9C000 1473 aa16.28■□□□□ 0.2
PCAT1-202ENST00000561978 SPHKAPQ2M3C7 1700 aa16.27■□□□□ 0.19
PCAT1-202ENST00000561978 PIK3C2BO00750 1634 aa16.26■□□□□ 0.19
PCAT1-202ENST00000561978 EIF4G2P78344 907 aaKnown RBP eCLIP16.26■□□□□ 0.19
PCAT1-202ENST00000561978 HIRIP3Q9BW71 556 aaPredicted RBP16.26■□□□□ 0.19
PCAT1-202ENST00000561978 STAG3Q9UJ98 1225 aa16.26■□□□□ 0.19
PCAT1-202ENST00000561978 SLC52A1Q9NWF4 448 aa16.25■□□□□ 0.19
PCAT1-202ENST00000561978 PLA2R1Q13018 1463 aa16.24■□□□□ 0.19
PCAT1-202ENST00000561978 PTPRTO14522 1441 aa16.24■□□□□ 0.19
PCAT1-202ENST00000561978 ANP32CO43423 234 aa16.24■□□□□ 0.19
PCAT1-202ENST00000561978 CHGAP10645 457 aaKnown RBP16.24■□□□□ 0.19
PCAT1-202ENST00000561978 UBR1Q8IWV7 1749 aa16.23■□□□□ 0.19
PCAT1-202ENST00000561978 DSG3P32926 999 aa16.23■□□□□ 0.19
PCAT1-202ENST00000561978 THEMISQ8N1K5 641 aaPredicted RBP16.22■□□□□ 0.19
PCAT1-202ENST00000561978 CCER2I3L3R5 266 aa16.22■□□□□ 0.19
PCAT1-202ENST00000561978 MYO5BQ9ULV0 1848 aa16.21■□□□□ 0.19
PCAT1-202ENST00000561978 HSPA5P11021 654 aaKnown RBP16.21■□□□□ 0.19
PCAT1-202ENST00000561978 TRPM2O94759 1503 aa16.21■□□□□ 0.19
PCAT1-202ENST00000561978 STRCQ7RTU9 1775 aa16.2■□□□□ 0.18
PCAT1-202ENST00000561978 NCKAP5LQ9HCH0 1330 aa16.19■□□□□ 0.18
PCAT1-202ENST00000561978 CLTCL1P53675 1640 aa16.19■□□□□ 0.18
PCAT1-202ENST00000561978 ADGRB3O60242 1522 aa16.18■□□□□ 0.18
PCAT1-202ENST00000561978 TMEM131LA2VDJ0 1609 aa16.17■□□□□ 0.18
PCAT1-202ENST00000561978 CCDC144AA2RUR9 1427 aa16.16■□□□□ 0.18
PCAT1-202ENST00000561978 KDM5AP29375 1690 aaKnown RBP16.15■□□□□ 0.18
PCAT1-202ENST00000561978 LTKP29376 864 aa16.15■□□□□ 0.18
PCAT1-202ENST00000561978 NUTM2DQ5VT03 806 aaPredicted RBP16.15■□□□□ 0.18
PCAT1-202ENST00000561978 ANKLE2Q86XL3 938 aa16.15■□□□□ 0.18
PCAT1-202ENST00000561978 TMEM2Q9UHN6 1383 aa16.15■□□□□ 0.18
PCAT1-202ENST00000561978 MYCNP04198 464 aaPredicted RBP16.15■□□□□ 0.18
PCAT1-202ENST00000561978 NBPF8Q3BBV2 869 aa16.15■□□□□ 0.18
PCAT1-202ENST00000561978 KIF1BO60333 1816 aa16.14■□□□□ 0.17
PCAT1-202ENST00000561978 ZNF326Q5BKZ1 582 aaKnown RBP16.14■□□□□ 0.17
PCAT1-202ENST00000561978 POLR1AO95602 1720 aaPredicted RBP16.13■□□□□ 0.17
PCAT1-202ENST00000561978 TXNDC2Q86VQ3 553 aa16.13■□□□□ 0.17
PCAT1-202ENST00000561978 SLIT1O75093 1534 aa16.13■□□□□ 0.17
PCAT1-202ENST00000561978 SAMD1Q6SPF0 538 aaPredicted RBP16.13■□□□□ 0.17
PCAT1-202ENST00000561978 ARHGAP23Q9P227 1491 aa16.12■□□□□ 0.17
PCAT1-202ENST00000561978 WASHC2AQ641Q2 1341 aa16.12■□□□□ 0.17
PCAT1-202ENST00000561978 FOXD4L1Q9NU39 408 aa16.11■□□□□ 0.17
PCAT1-202ENST00000561978 EID1Q9Y6B2 187 aa16.11■□□□□ 0.17
PCAT1-202ENST00000561978 NEURL4Q96JN8 1562 aa16.11■□□□□ 0.17
PCAT1-202ENST00000561978 RGL3Q3MIN7 710 aa16.11■□□□□ 0.17
PCAT1-202ENST00000561978 SCAF11Q99590 1463 aaKnown RBP16.1■□□□□ 0.17
PCAT1-202ENST00000561978 ZBTB22O15209 634 aa16.09■□□□□ 0.17
PCAT1-202ENST00000561978 RIMS2Q9UQ26 1411 aa16.09■□□□□ 0.17
PCAT1-202ENST00000561978 ZFYVE9O95405 1425 aa16.09■□□□□ 0.17
PCAT1-202ENST00000561978 SPATA31E1Q6ZUB1 1445 aa16.09■□□□□ 0.17
PCAT1-202ENST00000561978 NPHP4O75161 1426 aaPredicted RBP16.07■□□□□ 0.16
PCAT1-202ENST00000561978 BCANQ96GW7 911 aa16.07■□□□□ 0.16
PCAT1-202ENST00000561978 CCDC7Q96M83 1385 aa16.07■□□□□ 0.16
PCAT1-202ENST00000561978 MED14O60244 1454 aa16.06■□□□□ 0.16
PCAT1-202ENST00000561978 IQGAP1P46940 1657 aa16.06■□□□□ 0.16
PCAT1-202ENST00000561978 HDGFP51858 240 aaKnown RBP16.05■□□□□ 0.16
PCAT1-202ENST00000561978 SLC26A8Q96RN1 970 aa16.04■□□□□ 0.16
PCAT1-202ENST00000561978 ZNF219Q9P2Y4 722 aaPredicted RBP16.04■□□□□ 0.16
PCAT1-202ENST00000561978 NEXMIFQ5QGS0 1516 aa16.04■□□□□ 0.16
PCAT1-202ENST00000561978 ABCB7O75027 752 aa16.04■□□□□ 0.16
PCAT1-202ENST00000561978 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.04■□□□□ 0.16
PCAT1-202ENST00000561978 BCL11AQ9H165 835 aa16.03■□□□□ 0.16
PCAT1-202ENST00000561978 RALGAPBQ86X10 1494 aa16.02■□□□□ 0.15
PCAT1-202ENST00000561978 ZNF335Q9H4Z2 1342 aaPredicted RBP16.01■□□□□ 0.15
PCAT1-202ENST00000561978 PPLO60437 1756 aa16.01■□□□□ 0.15
PCAT1-202ENST00000561978 PLEKHG1Q9ULL1 1385 aa16.01■□□□□ 0.15
PCAT1-202ENST00000561978 C11orf95C9JLR9 678 aaPredicted RBP16■□□□□ 0.15
PCAT1-202ENST00000561978 USP47Q96K76 1375 aa16■□□□□ 0.15
PCAT1-202ENST00000561978 RPGRIP1LQ68CZ1 1315 aa16■□□□□ 0.15
PCAT1-202ENST00000561978 KIF7Q2M1P5 1343 aa15.99■□□□□ 0.15
PCAT1-202ENST00000561978 VGFO15240 615 aaPredicted RBP15.98■□□□□ 0.15
PCAT1-202ENST00000561978 DCAF11Q8TEB1 546 aa15.98■□□□□ 0.15
PCAT1-202ENST00000561978 ADGRF5Q8IZF2 1346 aa15.98■□□□□ 0.15
PCAT1-202ENST00000561978 CARD11Q9BXL7 1154 aa15.97■□□□□ 0.15
PCAT1-202ENST00000561978 KDM2AQ9Y2K7 1162 aa15.97■□□□□ 0.15
PCAT1-202ENST00000561978 IFT172Q9UG01 1749 aa15.97■□□□□ 0.15
PCAT1-202ENST00000561978 ADAMTS13Q76LX8 1427 aa15.96■□□□□ 0.15
PCAT1-202ENST00000561978 NRXN3Q9Y4C0 1643 aa15.96■□□□□ 0.14
PCAT1-202ENST00000561978 ROCK2O75116 1388 aaKnown RBP15.94■□□□□ 0.14
PCAT1-202ENST00000561978 PRKRIP1Q9H875 184 aaPredicted RBP15.93■□□□□ 0.14
PCAT1-202ENST00000561978 SETBP1Q9Y6X0 1596 aa15.93■□□□□ 0.14
PCAT1-202ENST00000561978 STRCP1A6NGW2 1772 aa15.93■□□□□ 0.14
PCAT1-202ENST00000561978 TBX22Q9Y458 520 aa15.92■□□□□ 0.14
PCAT1-202ENST00000561978 LTBP4Q8N2S1 1624 aa15.92■□□□□ 0.14
PCAT1-202ENST00000561978 ATF5Q9Y2D1 282 aaPredicted RBP15.91■□□□□ 0.14
PCAT1-202ENST00000561978 METP08581 1390 aa15.91■□□□□ 0.14
PCAT1-202ENST00000561978 PRAG1Q86YV5 1406 aa15.9■□□□□ 0.14
PCAT1-202ENST00000561978 PIK3C2GO75747 1445 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms