RNA–Protein interactions for RNA: ENST00000561952.1

GINS3-204, Transcript of GINS complex subunit 3, humanhuman

TSL 2

Gene GINS3, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-204ENST00000561952 LTKP29376 864 aa12.64□□□□□ -0.39
GINS3-204ENST00000561952 DISP3Q9P2K9 1392 aa12.64□□□□□ -0.39
GINS3-204ENST00000561952 ARHGAP23Q9P227 1491 aa12.64□□□□□ -0.39
GINS3-204ENST00000561952 IDI1Q13907 227 aa12.63□□□□□ -0.39
GINS3-204ENST00000561952 E9PCH4 1651 aa12.62□□□□□ -0.39
GINS3-204ENST00000561952 SPINK5Q9NQ38 1064 aaPredicted RBP12.62□□□□□ -0.39
GINS3-204ENST00000561952 EID1Q9Y6B2 187 aa12.62□□□□□ -0.39
GINS3-204ENST00000561952 NOS1P29475 1434 aa12.62□□□□□ -0.39
GINS3-204ENST00000561952 KDM5AP29375 1690 aaKnown RBP12.61□□□□□ -0.39
GINS3-204ENST00000561952 TMEM2Q9UHN6 1383 aa12.61□□□□□ -0.39
GINS3-204ENST00000561952 ROCK1Q13464 1354 aa12.6□□□□□ -0.39
GINS3-204ENST00000561952 IQGAP3Q86VI3 1631 aa12.6□□□□□ -0.39
GINS3-204ENST00000561952 CHGAP10645 457 aaKnown RBP12.6□□□□□ -0.39
GINS3-204ENST00000561952 LRRC7Q96NW7 1537 aa12.6□□□□□ -0.39
GINS3-204ENST00000561952 RPRD2Q5VT52 1461 aaKnown RBP12.59□□□□□ -0.39
GINS3-204ENST00000561952 BCANQ96GW7 911 aa12.59□□□□□ -0.39
GINS3-204ENST00000561952 XIRP1Q702N8 1843 aaKnown RBP12.58□□□□□ -0.4
GINS3-204ENST00000561952 TOM1O60784 492 aa12.58□□□□□ -0.4
GINS3-204ENST00000561952 NUP155O75694 1391 aa12.57□□□□□ -0.4
GINS3-204ENST00000561952 HSPA1LP34931 641 aa12.57□□□□□ -0.4
GINS3-204ENST00000561952 SLC26A8Q96RN1 970 aa12.57□□□□□ -0.4
GINS3-204ENST00000561952 ALKQ9UM73 1620 aa12.57□□□□□ -0.4
GINS3-204ENST00000561952 TMEM131LA2VDJ0 1609 aa12.56□□□□□ -0.4
GINS3-204ENST00000561952 SLC52A1Q9NWF4 448 aa12.56□□□□□ -0.4
GINS3-204ENST00000561952 PPP1R15AO75807 674 aaPredicted RBP12.55□□□□□ -0.4
GINS3-204ENST00000561952 NUTM2DQ5VT03 806 aaPredicted RBP12.55□□□□□ -0.4
GINS3-204ENST00000561952 SPHKAPQ2M3C7 1700 aa12.54□□□□□ -0.4
GINS3-204ENST00000561952 RBM33Q96EV2 1170 aaKnown RBP12.54□□□□□ -0.4
GINS3-204ENST00000561952 RRBP1Q9P2E9 1410 aaKnown RBP12.54□□□□□ -0.4
GINS3-204ENST00000561952 RIMS2Q9UQ26 1411 aa12.54□□□□□ -0.4
GINS3-204ENST00000561952 ILDR2Q71H61 639 aa12.53□□□□□ -0.4
GINS3-204ENST00000561952 ZFYVE9O95405 1425 aa12.52□□□□□ -0.41
GINS3-204ENST00000561952 TMEM94Q12767 1356 aa12.5□□□□□ -0.41
GINS3-204ENST00000561952 MED1Q15648 1581 aaPredicted RBP12.5□□□□□ -0.41
GINS3-204ENST00000561952 CHD2O14647 1828 aaKnown RBP12.49□□□□□ -0.41
GINS3-204ENST00000561952 NWD1Q149M9 1564 aa12.49□□□□□ -0.41
GINS3-204ENST00000561952 PLEKHG1Q9ULL1 1385 aa12.49□□□□□ -0.41
GINS3-204ENST00000561952 PROSER2Q86WR7 435 aaPredicted RBP12.49□□□□□ -0.41
GINS3-204ENST00000561952 NAIPQ13075 1403 aa12.48□□□□□ -0.41
GINS3-204ENST00000561952 KCNA6P17658 529 aa12.48□□□□□ -0.41
GINS3-204ENST00000561952 CLTCL1P53675 1640 aa12.48□□□□□ -0.41
GINS3-204ENST00000561952 TRIM52Q96A61 297 aa12.47□□□□□ -0.41
GINS3-204ENST00000561952 NKTRP30414 1462 aaKnown RBP12.46□□□□□ -0.41
GINS3-204ENST00000561952 HDGFP51858 240 aaKnown RBP12.46□□□□□ -0.41
GINS3-204ENST00000561952 ZNF326Q5BKZ1 582 aaKnown RBP12.46□□□□□ -0.41
GINS3-204ENST00000561952 ROBO1Q9Y6N7 1651 aa12.45□□□□□ -0.42
GINS3-204ENST00000561952 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.45□□□□□ -0.42
GINS3-204ENST00000561952 KIF1BO60333 1816 aa12.45□□□□□ -0.42
GINS3-204ENST00000561952 ADAMTS13Q76LX8 1427 aa12.44□□□□□ -0.42
GINS3-204ENST00000561952 DIP2AQ14689 1571 aa12.43□□□□□ -0.42
GINS3-204ENST00000561952 TRPM2O94759 1503 aa12.43□□□□□ -0.42
GINS3-204ENST00000561952 C14orf37Q86TY3 774 aa12.43□□□□□ -0.42
GINS3-204ENST00000561952 HFM1A2PYH4 1435 aa12.43□□□□□ -0.42
GINS3-204ENST00000561952 MSH6P52701 1360 aa12.43□□□□□ -0.42
GINS3-204ENST00000561952 NRXN3Q9Y4C0 1643 aa12.42□□□□□ -0.42
GINS3-204ENST00000561952 TBX22Q9Y458 520 aa12.4□□□□□ -0.42
GINS3-204ENST00000561952 NEXMIFQ5QGS0 1516 aa12.4□□□□□ -0.42
GINS3-204ENST00000561952 PHLPP1O60346 1717 aa12.4□□□□□ -0.43
GINS3-204ENST00000561952 SLC4A1APQ9BWU0 796 aaKnown RBP12.39□□□□□ -0.43
GINS3-204ENST00000561952 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.39□□□□□ -0.43
GINS3-204ENST00000561952 PTPRUQ92729 1446 aa12.38□□□□□ -0.43
GINS3-204ENST00000561952 SETBP1Q9Y6X0 1596 aa12.38□□□□□ -0.43
GINS3-204ENST00000561952 FAM135BQ49AJ0 1406 aa12.37□□□□□ -0.43
GINS3-204ENST00000561952 SOCS7O14512 581 aa12.37□□□□□ -0.43
GINS3-204ENST00000561952 AMOTL2Q9Y2J4 779 aa12.37□□□□□ -0.43
GINS3-204ENST00000561952 XRN1Q8IZH2 1706 aaKnown RBP12.37□□□□□ -0.43
GINS3-204ENST00000561952 ZNF219Q9P2Y4 722 aaPredicted RBP12.36□□□□□ -0.43
GINS3-204ENST00000561952 PIK3R4Q99570 1358 aa12.35□□□□□ -0.43
GINS3-204ENST00000561952 SLAIN2Q9P270 581 aa12.35□□□□□ -0.43
GINS3-204ENST00000561952 METP08581 1390 aa12.34□□□□□ -0.43
GINS3-204ENST00000561952 PPLO60437 1756 aa12.34□□□□□ -0.43
GINS3-204ENST00000561952 ATF3P18847 181 aa12.33□□□□□ -0.44
GINS3-204ENST00000561952 NALCNQ8IZF0 1738 aa12.33□□□□□ -0.44
GINS3-204ENST00000561952 SETD1AO15047 1707 aaKnown RBP12.32□□□□□ -0.44
GINS3-204ENST00000561952 COL16A1Q07092 1604 aaPredicted RBP12.31□□□□□ -0.44
GINS3-204ENST00000561952 NCOA3Q9Y6Q9 1424 aa12.3□□□□□ -0.44
GINS3-204ENST00000561952 SLC4A2P04920 1241 aa12.3□□□□□ -0.44
GINS3-204ENST00000561952 CADPS2Q86UW7 1296 aa12.3□□□□□ -0.44
GINS3-204ENST00000561952 C19orf44Q9H6X5 657 aa12.3□□□□□ -0.44
GINS3-204ENST00000561952 CCDC144AA2RUR9 1427 aa12.29□□□□□ -0.44
GINS3-204ENST00000561952 ABCB7O75027 752 aa12.29□□□□□ -0.44
GINS3-204ENST00000561952 RGL3Q3MIN7 710 aa12.29□□□□□ -0.44
GINS3-204ENST00000561952 MPHOSPH9Q99550 1183 aa12.29□□□□□ -0.44
GINS3-204ENST00000561952 VGFO15240 615 aaPredicted RBP12.28□□□□□ -0.44
GINS3-204ENST00000561952 IFT172Q9UG01 1749 aa12.28□□□□□ -0.44
GINS3-204ENST00000561952 AHDC1Q5TGY3 1603 aaPredicted RBP12.27□□□□□ -0.44
GINS3-204ENST00000561952 JCADQ9P266 1359 aa12.27□□□□□ -0.45
GINS3-204ENST00000561952 SETD5Q9C0A6 1442 aa12.27□□□□□ -0.45
GINS3-204ENST00000561952 ADGRL3Q9HAR2 1447 aa12.27□□□□□ -0.45
GINS3-204ENST00000561952 ASXL1Q8IXJ9 1541 aa12.27□□□□□ -0.45
GINS3-204ENST00000561952 BRINP3Q76B58 766 aa12.26□□□□□ -0.45
GINS3-204ENST00000561952 RGS17Q9UGC6 210 aaPredicted RBP12.26□□□□□ -0.45
GINS3-204ENST00000561952 MST1RQ04912 1400 aa12.26□□□□□ -0.45
GINS3-204ENST00000561952 RPGRIP1LQ68CZ1 1315 aa12.25□□□□□ -0.45
GINS3-204ENST00000561952 ADGRF5Q8IZF2 1346 aa12.25□□□□□ -0.45
GINS3-204ENST00000561952 RAB3GAP2Q9H2M9 1393 aa12.25□□□□□ -0.45
GINS3-204ENST00000561952 ROBO2Q9HCK4 1378 aa12.25□□□□□ -0.45
GINS3-204ENST00000561952 DCCP43146 1447 aa12.25□□□□□ -0.45
GINS3-204ENST00000561952 NHSL1Q5SYE7 1610 aa12.25□□□□□ -0.45
GINS3-204ENST00000561952 SHPRHQ149N8 1683 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms