RNA–Protein interactions for RNA: ENST00000561728.1

AC010542.3-202, humanhuman

APPRIS P1 TSL 2 BASIC

Gene AC010542.3, Length 701 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC010542.3-202ENST00000561728 ATF3P18847 181 aa16.01■□□□□ 0.15
AC010542.3-202ENST00000561728 LRRC59Q96AG4 307 aaKnown RBP16.01■□□□□ 0.15
AC010542.3-202ENST00000561728 ATRNO75882 1429 aa16■□□□□ 0.15
AC010542.3-202ENST00000561728 BRINP3Q76B58 766 aa15.99■□□□□ 0.15
AC010542.3-202ENST00000561728 TMEM2Q9UHN6 1383 aa15.99■□□□□ 0.15
AC010542.3-202ENST00000561728 RTEL1-TNFRSF6BF6WH68 1400 aa15.98■□□□□ 0.15
AC010542.3-202ENST00000561728 CEP350Q5VT06 3117 aa15.97■□□□□ 0.15
AC010542.3-202ENST00000561728 STAG3Q9UJ98 1225 aa15.97■□□□□ 0.15
AC010542.3-202ENST00000561728 PNPLA6Q8IY17 1366 aa15.97■□□□□ 0.15
AC010542.3-202ENST00000561728 NCOA3Q9Y6Q9 1424 aa15.96■□□□□ 0.15
AC010542.3-202ENST00000561728 CSRNP3Q8WYN3 585 aa15.96■□□□□ 0.15
AC010542.3-202ENST00000561728 BCANQ96GW7 911 aa15.96■□□□□ 0.15
AC010542.3-202ENST00000561728 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.96■□□□□ 0.15
AC010542.3-202ENST00000561728 CFDP1Q9UEE9 299 aaPredicted RBP15.96■□□□□ 0.15
AC010542.3-202ENST00000561728 MAST1Q9Y2H9 1570 aa15.96■□□□□ 0.14
AC010542.3-202ENST00000561728 R3HDM1Q15032 1099 aaKnown RBP15.95■□□□□ 0.14
AC010542.3-202ENST00000561728 TET3O43151 1660 aa15.95■□□□□ 0.14
AC010542.3-202ENST00000561728 GPATCH8Q9UKJ3 1502 aaKnown RBP15.94■□□□□ 0.14
AC010542.3-202ENST00000561728 BAG6P46379 1132 aa15.94■□□□□ 0.14
AC010542.3-202ENST00000561728 FNBP4Q8N3X1 1017 aaPredicted RBP15.93■□□□□ 0.14
AC010542.3-202ENST00000561728 C19orf44Q9H6X5 657 aa15.93■□□□□ 0.14
AC010542.3-202ENST00000561728 UNC13BO14795 1591 aa15.92■□□□□ 0.14
AC010542.3-202ENST00000561728 LRRIQ1Q96JM4 1722 aa15.92■□□□□ 0.14
AC010542.3-202ENST00000561728 MROH1Q8NDA8 1641 aa15.92■□□□□ 0.14
AC010542.3-202ENST00000561728 CFAP65Q6ZU64 1925 aaKnown RBP15.92■□□□□ 0.14
AC010542.3-202ENST00000561728 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.91■□□□□ 0.14
AC010542.3-202ENST00000561728 ASXL1Q8IXJ9 1541 aa15.91■□□□□ 0.14
AC010542.3-202ENST00000561728 GJD4Q96KN9 370 aaPredicted RBP15.89■□□□□ 0.13
AC010542.3-202ENST00000561728 CAMSAP2Q08AD1 1489 aa15.89■□□□□ 0.13
AC010542.3-202ENST00000561728 CCDC18Q5T9S5 1454 aa15.87■□□□□ 0.13
AC010542.3-202ENST00000561728 ARHGAP35Q9NRY4 1499 aa15.87■□□□□ 0.13
AC010542.3-202ENST00000561728 PPP1R1BQ9UD71 204 aaPredicted RBP15.87■□□□□ 0.13
AC010542.3-202ENST00000561728 PTCH1Q13635 1447 aa15.86■□□□□ 0.13
AC010542.3-202ENST00000561728 CHD2O14647 1828 aaKnown RBP15.85■□□□□ 0.13
AC010542.3-202ENST00000561728 PIK3C2BO00750 1634 aa15.85■□□□□ 0.13
AC010542.3-202ENST00000561728 EFCAB6Q5THR3 1501 aa15.84■□□□□ 0.13
AC010542.3-202ENST00000561728 CCNB3Q8WWL7 1395 aa15.84■□□□□ 0.13
AC010542.3-202ENST00000561728 NINLQ9Y2I6 1382 aa15.82■□□□□ 0.12
AC010542.3-202ENST00000561728 MBD5Q9P267 1494 aa15.82■□□□□ 0.12
AC010542.3-202ENST00000561728 SPHKAPQ2M3C7 1700 aa15.82■□□□□ 0.12
AC010542.3-202ENST00000561728 DDX17Q92841 729 aaKnown RBP15.81■□□□□ 0.12
AC010542.3-202ENST00000561728 ZNF644Q9H582 1327 aaPredicted RBP15.8■□□□□ 0.12
AC010542.3-202ENST00000561728 PPP1R15AO75807 674 aaPredicted RBP15.8■□□□□ 0.12
AC010542.3-202ENST00000561728 SLC34A2O95436 690 aa15.8■□□□□ 0.12
AC010542.3-202ENST00000561728 EN1Q05925 392 aaPredicted RBP15.8■□□□□ 0.12
AC010542.3-202ENST00000561728 GIGYF1O75420 1035 aaPredicted RBP15.79■□□□□ 0.12
AC010542.3-202ENST00000561728 BRWD3Q6RI45 1802 aa15.78■□□□□ 0.12
AC010542.3-202ENST00000561728 DCCP43146 1447 aa15.77■□□□□ 0.12
AC010542.3-202ENST00000561728 CEP152O94986 1710 aa15.77■□□□□ 0.11
AC010542.3-202ENST00000561728 SEPT12Q8IYM1 358 aa15.76■□□□□ 0.11
AC010542.3-202ENST00000561728 RALGAPBQ86X10 1494 aa15.76■□□□□ 0.11
AC010542.3-202ENST00000561728 UTRNP46939 3433 aa15.76■□□□□ 0.11
AC010542.3-202ENST00000561728 KRT27Q7Z3Y8 459 aa15.75■□□□□ 0.11
AC010542.3-202ENST00000561728 CAMTA1Q9Y6Y1 1673 aa15.75■□□□□ 0.11
AC010542.3-202ENST00000561728 MST1RQ04912 1400 aa15.75■□□□□ 0.11
AC010542.3-202ENST00000561728 CCDC141Q6ZP82 1450 aa15.74■□□□□ 0.11
AC010542.3-202ENST00000561728 GLI3P10071 1580 aa15.73■□□□□ 0.11
AC010542.3-202ENST00000561728 PLEKHG1Q9ULL1 1385 aa15.73■□□□□ 0.11
AC010542.3-202ENST00000561728 SPON1Q9HCB6 807 aa15.72■□□□□ 0.11
AC010542.3-202ENST00000561728 ARHGAP31Q2M1Z3 1444 aa15.71■□□□□ 0.11
AC010542.3-202ENST00000561728 IDI1Q13907 227 aa15.71■□□□□ 0.11
AC010542.3-202ENST00000561728 TBX22Q9Y458 520 aa15.71■□□□□ 0.11
AC010542.3-202ENST00000561728 CAPN15O75808 1086 aa15.7■□□□□ 0.1
AC010542.3-202ENST00000561728 CASKIN1Q8WXD9 1431 aa15.69■□□□□ 0.1
AC010542.3-202ENST00000561728 UNC5CLQ8IV45 518 aa15.69■□□□□ 0.1
AC010542.3-202ENST00000561728 PCDH10Q9P2E7 1040 aa15.69■□□□□ 0.1
AC010542.3-202ENST00000561728 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.68■□□□□ 0.1
AC010542.3-202ENST00000561728 RSPH4AQ5TD94 716 aa15.67■□□□□ 0.1
AC010542.3-202ENST00000561728 CHD4Q14839 1912 aa15.66■□□□□ 0.1
AC010542.3-202ENST00000561728 HDGFP51858 240 aaKnown RBP15.66■□□□□ 0.1
AC010542.3-202ENST00000561728 EZH2Q15910 746 aaKnown RBP15.66■□□□□ 0.1
AC010542.3-202ENST00000561728 ADGRB3O60242 1522 aa15.66■□□□□ 0.1
AC010542.3-202ENST00000561728 RGPD1P0DJD0 1748 aa15.65■□□□□ 0.1
AC010542.3-202ENST00000561728 EIF2AK4Q9P2K8 1649 aaKnown RBP15.65■□□□□ 0.1
AC010542.3-202ENST00000561728 A0A0G2JS52 829 aa15.65■□□□□ 0.1
AC010542.3-202ENST00000561728 MSH5O43196 834 aa15.65■□□□□ 0.1
AC010542.3-202ENST00000561728 KCNQ2O43526 872 aa15.65■□□□□ 0.1
AC010542.3-202ENST00000561728 TSPY4P0CV99 314 aa15.65■□□□□ 0.1
AC010542.3-202ENST00000561728 TSPY10P0CW01 314 aa15.65■□□□□ 0.1
AC010542.3-202ENST00000561728 MYT1Q01538 1121 aa15.65■□□□□ 0.1
AC010542.3-202ENST00000561728 SOS2Q07890 1332 aaPredicted RBP15.65■□□□□ 0.1
AC010542.3-202ENST00000561728 MYOM2P54296 1465 aa15.65■□□□□ 0.1
AC010542.3-202ENST00000561728 MTUS2Q5JR59 1369 aa15.64■□□□□ 0.09
AC010542.3-202ENST00000561728 PIK3R4Q99570 1358 aa15.64■□□□□ 0.09
AC010542.3-202ENST00000561728 DISP2A7MBM2 1401 aa15.64■□□□□ 0.09
AC010542.3-202ENST00000561728 COL22A1Q8NFW1 1626 aaPredicted RBP15.64■□□□□ 0.09
AC010542.3-202ENST00000561728 MARF1Q9Y4F3 1742 aaKnown RBP15.63■□□□□ 0.09
AC010542.3-202ENST00000561728 EEA1Q15075 1411 aa15.62■□□□□ 0.09
AC010542.3-202ENST00000561728 AMOTL2Q9Y2J4 779 aa15.62■□□□□ 0.09
AC010542.3-202ENST00000561728 UBTFP17480 764 aaKnown RBP15.61■□□□□ 0.09
AC010542.3-202ENST00000561728 CCDC9Q9Y3X0 531 aaKnown RBP15.61■□□□□ 0.09
AC010542.3-202ENST00000561728 RPRD2Q5VT52 1461 aaKnown RBP15.6■□□□□ 0.09
AC010542.3-202ENST00000561728 NBPF8Q3BBV2 869 aa15.6■□□□□ 0.09
AC010542.3-202ENST00000561728 NBPF14Q5TI25 921 aa15.6■□□□□ 0.09
AC010542.3-202ENST00000561728 ZFYVE9O95405 1425 aa15.6■□□□□ 0.09
AC010542.3-202ENST00000561728 TRPM2O94759 1503 aa15.59■□□□□ 0.09
AC010542.3-202ENST00000561728 EHBP1L1Q8N3D4 1523 aa15.59■□□□□ 0.09
AC010542.3-202ENST00000561728 RIMS2Q9UQ26 1411 aa15.59■□□□□ 0.09
AC010542.3-202ENST00000561728 SLIT2O94813 1529 aa15.58■□□□□ 0.09
AC010542.3-202ENST00000561728 ONECUT3O60422 494 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms