RNA–Protein interactions for RNA: ENST00000561726.1

TNRC6A-208, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 4

Gene TNRC6A, Length 543 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-208ENST00000561726 SLC4A3P48751 1232 aa6.85□□□□□ -1.31
TNRC6A-208ENST00000561726 PXYLP1Q8TE99 480 aa6.85□□□□□ -1.31
TNRC6A-208ENST00000561726 NECTIN2Q92692 538 aa6.85□□□□□ -1.31
TNRC6A-208ENST00000561726 GNPATO15228 680 aa6.84□□□□□ -1.31
TNRC6A-208ENST00000561726 OATP04181 439 aa6.84□□□□□ -1.31
TNRC6A-208ENST00000561726 COPS2P61201 443 aa6.84□□□□□ -1.31
TNRC6A-208ENST00000561726 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.83□□□□□ -1.32
TNRC6A-208ENST00000561726 METTL3Q86U44 580 aaKnown RBP6.83□□□□□ -1.32
TNRC6A-208ENST00000561726 NKX2-3Q8TAU0 364 aa6.83□□□□□ -1.32
TNRC6A-208ENST00000561726 SLC10A3P09131 477 aa6.82□□□□□ -1.32
TNRC6A-208ENST00000561726 GPIHBP1Q8IV16 184 aa6.82□□□□□ -1.32
TNRC6A-208ENST00000561726 PPP1R18Q6NYC8 613 aa6.81□□□□□ -1.32
TNRC6A-208ENST00000561726 NLRP7Q8WX94 980 aa6.81□□□□□ -1.32
TNRC6A-208ENST00000561726 PCDHB3Q9Y5E6 796 aa6.81□□□□□ -1.32
TNRC6A-208ENST00000561726 CFHP08603 1231 aa6.8□□□□□ -1.32
TNRC6A-208ENST00000561726 BLOC1S3Q6QNY0 202 aa6.8□□□□□ -1.32
TNRC6A-208ENST00000561726 PRR14Q9BWN1 585 aa6.8□□□□□ -1.32
TNRC6A-208ENST00000561726 ZPR1O75312 459 aa6.79□□□□□ -1.32
TNRC6A-208ENST00000561726 ACTN4O43707 911 aaKnown RBP6.78□□□□□ -1.32
TNRC6A-208ENST00000561726 KMT5BQ4FZB7 885 aa6.78□□□□□ -1.32
TNRC6A-208ENST00000561726 PHOX2BQ99453 314 aa6.78□□□□□ -1.32
TNRC6A-208ENST00000561726 IRX2Q9BZI1 471 aaPredicted RBP6.78□□□□□ -1.32
TNRC6A-208ENST00000561726 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.77□□□□□ -1.33
TNRC6A-208ENST00000561726 TULP1O00294 542 aaPredicted RBP6.76□□□□□ -1.33
TNRC6A-208ENST00000561726 TLL1O43897 1013 aa6.76□□□□□ -1.33
TNRC6A-208ENST00000561726 DAXXQ9UER7 740 aaPredicted RBP6.76□□□□□ -1.33
TNRC6A-208ENST00000561726 PRKD2Q9BZL6 878 aa6.75□□□□□ -1.33
TNRC6A-208ENST00000561726 DDX11L8A8MPP1 907 aa6.74□□□□□ -1.33
TNRC6A-208ENST00000561726 PUS10Q3MIT2 529 aaKnown RBP6.74□□□□□ -1.33
TNRC6A-208ENST00000561726 RSPH4AQ5TD94 716 aa6.74□□□□□ -1.33
TNRC6A-208ENST00000561726 RDH13Q8NBN7 331 aa6.74□□□□□ -1.33
TNRC6A-208ENST00000561726 GGCXP38435 758 aa6.72□□□□□ -1.33
TNRC6A-208ENST00000561726 MAP2K5Q13163 448 aa6.72□□□□□ -1.33
TNRC6A-208ENST00000561726 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.72□□□□□ -1.33
TNRC6A-208ENST00000561726 RNF223E7ERA6 249 aa6.71□□□□□ -1.34
TNRC6A-208ENST00000561726 IRF6O14896 467 aa6.71□□□□□ -1.34
TNRC6A-208ENST00000561726 NR1I2O75469 434 aa6.71□□□□□ -1.34
TNRC6A-208ENST00000561726 SCUBE3Q8IX30 993 aa6.71□□□□□ -1.34
TNRC6A-208ENST00000561726 TMUB1Q9BVT8 246 aa6.71□□□□□ -1.34
TNRC6A-208ENST00000561726 PPEF1O14829 653 aaPredicted RBP6.7□□□□□ -1.34
TNRC6A-208ENST00000561726 S1PR4O95977 384 aa6.7□□□□□ -1.34
TNRC6A-208ENST00000561726 FUT2Q10981 343 aa6.7□□□□□ -1.34
TNRC6A-208ENST00000561726 V9GY48 417 aaPredicted RBP6.7□□□□□ -1.34
TNRC6A-208ENST00000561726 ADH1BP00325 375 aa6.69□□□□□ -1.34
TNRC6A-208ENST00000561726 GCGRP47871 477 aa6.69□□□□□ -1.34
TNRC6A-208ENST00000561726 SULF1Q8IWU6 871 aa6.69□□□□□ -1.34
TNRC6A-208ENST00000561726 MINK1Q8N4C8 1332 aaPredicted RBP6.69□□□□□ -1.34
TNRC6A-208ENST00000561726 MORN1Q5T089 497 aa6.68□□□□□ -1.34
TNRC6A-208ENST00000561726 LMOD2Q6P5Q4 547 aa6.68□□□□□ -1.34
TNRC6A-208ENST00000561726 CCDC102AQ96A19 550 aa6.68□□□□□ -1.34
TNRC6A-208ENST00000561726 EMID1Q96A84 441 aaPredicted RBP6.68□□□□□ -1.34
TNRC6A-208ENST00000561726 GFRA3O60609 400 aa6.67□□□□□ -1.34
TNRC6A-208ENST00000561726 ATP6V1AP38606 617 aa6.67□□□□□ -1.34
TNRC6A-208ENST00000561726 MDM2Q00987 491 aaPredicted RBP6.67□□□□□ -1.34
TNRC6A-208ENST00000561726 Q6ZNB5 142 aa6.66□□□□□ -1.34
TNRC6A-208ENST00000561726 ANKLE1Q8NAG6 615 aa6.66□□□□□ -1.34
TNRC6A-208ENST00000561726 SPSB2Q99619 263 aa6.66□□□□□ -1.34
TNRC6A-208ENST00000561726 SLC6A16Q9GZN6 736 aa6.66□□□□□ -1.34
TNRC6A-208ENST00000561726 SLC27A5Q9Y2P5 690 aa6.66□□□□□ -1.34
TNRC6A-208ENST00000561726 CD46P15529 392 aa6.65□□□□□ -1.34
TNRC6A-208ENST00000561726 SLC19A1P41440 591 aa6.65□□□□□ -1.34
TNRC6A-208ENST00000561726 LAPTM4AQ15012 233 aa6.64□□□□□ -1.35
TNRC6A-208ENST00000561726 THAP11Q96EK4 314 aa6.64□□□□□ -1.35
TNRC6A-208ENST00000561726 PLA2G2CQ5R387 149 aa6.63□□□□□ -1.35
TNRC6A-208ENST00000561726 LIAT1Q6ZQX7 453 aa6.63□□□□□ -1.35
TNRC6A-208ENST00000561726 KRI1Q8N9T8 703 aaKnown RBP6.63□□□□□ -1.35
TNRC6A-208ENST00000561726 NRG2O14511 850 aaPredicted RBP6.62□□□□□ -1.35
TNRC6A-208ENST00000561726 FMNL1O95466 1100 aaPredicted RBP6.62□□□□□ -1.35
TNRC6A-208ENST00000561726 RNF19BQ6ZMZ0 732 aa6.62□□□□□ -1.35
TNRC6A-208ENST00000561726 FAM160A2Q8N612 972 aaPredicted RBP6.62□□□□□ -1.35
TNRC6A-208ENST00000561726 ZC3H15Q8WU90 426 aaKnown RBP6.62□□□□□ -1.35
TNRC6A-208ENST00000561726 PDZRN3Q9UPQ7 1066 aa6.62□□□□□ -1.35
TNRC6A-208ENST00000561726 LCE2BO14633 110 aa6.61□□□□□ -1.35
TNRC6A-208ENST00000561726 KDM4AO75164 1064 aa6.61□□□□□ -1.35
TNRC6A-208ENST00000561726 ZMYND10O75800 440 aa6.61□□□□□ -1.35
TNRC6A-208ENST00000561726 CLCN1P35523 988 aa6.61□□□□□ -1.35
TNRC6A-208ENST00000561726 SPRYD7Q5W111 196 aa6.61□□□□□ -1.35
TNRC6A-208ENST00000561726 BRICD5Q6PL45 260 aa6.61□□□□□ -1.35
TNRC6A-208ENST00000561726 BARGINQ6ZT62 677 aa6.61□□□□□ -1.35
TNRC6A-208ENST00000561726 HLA-CQ95604 372 aa6.61□□□□□ -1.35
TNRC6A-208ENST00000561726 REPIN1Q9BWE0 567 aaKnown RBP6.61□□□□□ -1.35
TNRC6A-208ENST00000561726 GPCPD1Q9NPB8 672 aa6.61□□□□□ -1.35
TNRC6A-208ENST00000561726 PRDM9Q9NQV7 894 aa6.61□□□□□ -1.35
TNRC6A-208ENST00000561726 GRIPAP1Q4V328 841 aa6.6□□□□□ -1.35
TNRC6A-208ENST00000561726 TRIM67Q6ZTA4 783 aa6.6□□□□□ -1.35
TNRC6A-208ENST00000561726 ZNF598Q86UK7 904 aaKnown RBP6.6□□□□□ -1.35
TNRC6A-208ENST00000561726 FAM217BQ9NTX9 383 aaPredicted RBP6.6□□□□□ -1.35
TNRC6A-208ENST00000561726 SALL2Q9Y467 1007 aaPredicted RBP6.6□□□□□ -1.35
TNRC6A-208ENST00000561726 FCF1Q9Y324 198 aaKnown RBP6.59□□□□□ -1.35
TNRC6A-208ENST00000561726 ZNF697Q5TEC3 545 aa6.58□□□□□ -1.36
TNRC6A-208ENST00000561726 TRAF7Q6Q0C0 670 aa6.58□□□□□ -1.36
TNRC6A-208ENST00000561726 GUCA2AQ02747 115 aa6.57□□□□□ -1.36
TNRC6A-208ENST00000561726 Q3C1V9 767 aa6.57□□□□□ -1.36
TNRC6A-208ENST00000561726 HOXA2O43364 376 aa6.56□□□□□ -1.36
TNRC6A-208ENST00000561726 USP46P62068 366 aa6.56□□□□□ -1.36
TNRC6A-208ENST00000561726 MSS51Q4VC12 460 aa6.56□□□□□ -1.36
TNRC6A-208ENST00000561726 TNFRSF10AO00220 468 aa6.55□□□□□ -1.36
TNRC6A-208ENST00000561726 GDF9O60383 454 aa6.55□□□□□ -1.36
TNRC6A-208ENST00000561726 PRKCSHP14314 528 aaPredicted RBP6.55□□□□□ -1.36
TNRC6A-208ENST00000561726 SSTR3P32745 418 aaPredicted RBP6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 214.3 ms