RNA–Protein interactions for RNA: ENST00000561377.1

HMBOX1-216, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 307 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-216ENST00000561377 MTRQ99707 1265 aa12.83□□□□□ -0.36
HMBOX1-216ENST00000561377 PRR14Q9BWN1 585 aa12.83□□□□□ -0.36
HMBOX1-216ENST00000561377 IL21Q9HBE4 155 aa12.83□□□□□ -0.36
HMBOX1-216ENST00000561377 GPR37O15354 613 aa12.82□□□□□ -0.36
HMBOX1-216ENST00000561377 GPIHBP1Q8IV16 184 aa12.82□□□□□ -0.36
HMBOX1-216ENST00000561377 PXYLP1Q8TE99 480 aa12.82□□□□□ -0.36
HMBOX1-216ENST00000561377 METTL3Q86U44 580 aaKnown RBP12.78□□□□□ -0.36
HMBOX1-216ENST00000561377 FECHP22830 423 aa12.77□□□□□ -0.37
HMBOX1-216ENST00000561377 KMT5BQ4FZB7 885 aa12.75□□□□□ -0.37
HMBOX1-216ENST00000561377 COPS2P61201 443 aa12.74□□□□□ -0.37
HMBOX1-216ENST00000561377 PCDHB3Q9Y5E6 796 aa12.74□□□□□ -0.37
HMBOX1-216ENST00000561377 ZNF516Q92618 1163 aa12.73□□□□□ -0.37
HMBOX1-216ENST00000561377 RSPH4AQ5TD94 716 aa12.72□□□□□ -0.37
HMBOX1-216ENST00000561377 CFHP08603 1231 aa12.71□□□□□ -0.37
HMBOX1-216ENST00000561377 ACTN4O43707 911 aaKnown RBP12.69□□□□□ -0.38
HMBOX1-216ENST00000561377 SLC10A3P09131 477 aa12.69□□□□□ -0.38
HMBOX1-216ENST00000561377 ZPR1O75312 459 aa12.68□□□□□ -0.38
HMBOX1-216ENST00000561377 DAXXQ9UER7 740 aaPredicted RBP12.68□□□□□ -0.38
HMBOX1-216ENST00000561377 PPP1R18Q6NYC8 613 aa12.66□□□□□ -0.38
HMBOX1-216ENST00000561377 BLOC1S3Q6QNY0 202 aa12.66□□□□□ -0.38
HMBOX1-216ENST00000561377 IRX2Q9BZI1 471 aaPredicted RBP12.65□□□□□ -0.38
HMBOX1-216ENST00000561377 GGCXP38435 758 aa12.64□□□□□ -0.39
HMBOX1-216ENST00000561377 MAP2K5Q13163 448 aa12.64□□□□□ -0.39
HMBOX1-216ENST00000561377 NKX2-3Q8TAU0 364 aa12.64□□□□□ -0.39
HMBOX1-216ENST00000561377 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.64□□□□□ -0.39
HMBOX1-216ENST00000561377 RDH13Q8NBN7 331 aa12.62□□□□□ -0.39
HMBOX1-216ENST00000561377 SULF1Q8IWU6 871 aa12.61□□□□□ -0.39
HMBOX1-216ENST00000561377 PHOX2BQ99453 314 aa12.61□□□□□ -0.39
HMBOX1-216ENST00000561377 DDX11L8A8MPP1 907 aa12.6□□□□□ -0.39
HMBOX1-216ENST00000561377 NR1I2O75469 434 aa12.6□□□□□ -0.39
HMBOX1-216ENST00000561377 NLRP7Q8WX94 980 aa12.6□□□□□ -0.39
HMBOX1-216ENST00000561377 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.59□□□□□ -0.39
HMBOX1-216ENST00000561377 TMUB1Q9BVT8 246 aa12.59□□□□□ -0.39
HMBOX1-216ENST00000561377 MINK1Q8N4C8 1332 aaPredicted RBP12.58□□□□□ -0.4
HMBOX1-216ENST00000561377 IRF6O14896 467 aa12.57□□□□□ -0.4
HMBOX1-216ENST00000561377 PRKD2Q9BZL6 878 aa12.57□□□□□ -0.4
HMBOX1-216ENST00000561377 TLL1O43897 1013 aa12.55□□□□□ -0.4
HMBOX1-216ENST00000561377 LMOD2Q6P5Q4 547 aa12.55□□□□□ -0.4
HMBOX1-216ENST00000561377 V9GY48 417 aaPredicted RBP12.54□□□□□ -0.4
HMBOX1-216ENST00000561377 PUS10Q3MIT2 529 aaKnown RBP12.53□□□□□ -0.4
HMBOX1-216ENST00000561377 ADH1BP00325 375 aa12.52□□□□□ -0.41
HMBOX1-216ENST00000561377 GCGRP47871 477 aa12.52□□□□□ -0.41
HMBOX1-216ENST00000561377 SCUBE3Q8IX30 993 aa12.52□□□□□ -0.41
HMBOX1-216ENST00000561377 CCDC102AQ96A19 550 aa12.51□□□□□ -0.41
HMBOX1-216ENST00000561377 ATP6V1AP38606 617 aa12.5□□□□□ -0.41
HMBOX1-216ENST00000561377 FUT2Q10981 343 aa12.49□□□□□ -0.41
HMBOX1-216ENST00000561377 RNF223E7ERA6 249 aa12.48□□□□□ -0.41
HMBOX1-216ENST00000561377 MDM2Q00987 491 aaPredicted RBP12.48□□□□□ -0.41
HMBOX1-216ENST00000561377 MORN1Q5T089 497 aa12.48□□□□□ -0.41
HMBOX1-216ENST00000561377 S1PR4O95977 384 aa12.47□□□□□ -0.41
HMBOX1-216ENST00000561377 LAPTM4AQ15012 233 aa12.47□□□□□ -0.41
HMBOX1-216ENST00000561377 SLC6A16Q9GZN6 736 aa12.47□□□□□ -0.41
HMBOX1-216ENST00000561377 CD46P15529 392 aa12.46□□□□□ -0.41
HMBOX1-216ENST00000561377 GRIPAP1Q4V328 841 aa12.46□□□□□ -0.41
HMBOX1-216ENST00000561377 ANKLE1Q8NAG6 615 aa12.45□□□□□ -0.42
HMBOX1-216ENST00000561377 SPSB2Q99619 263 aa12.45□□□□□ -0.42
HMBOX1-216ENST00000561377 KRI1Q8N9T8 703 aaKnown RBP12.44□□□□□ -0.42
HMBOX1-216ENST00000561377 CLCN1P35523 988 aa12.43□□□□□ -0.42
HMBOX1-216ENST00000561377 GPCPD1Q9NPB8 672 aa12.43□□□□□ -0.42
HMBOX1-216ENST00000561377 SLC27A5Q9Y2P5 690 aa12.42□□□□□ -0.42
HMBOX1-216ENST00000561377 PPEF1O14829 653 aaPredicted RBP12.41□□□□□ -0.42
HMBOX1-216ENST00000561377 GFRA3O60609 400 aa12.41□□□□□ -0.42
HMBOX1-216ENST00000561377 FMNL1O95466 1100 aaPredicted RBP12.41□□□□□ -0.42
HMBOX1-216ENST00000561377 SLC19A1P41440 591 aa12.41□□□□□ -0.42
HMBOX1-216ENST00000561377 BARGINQ6ZT62 677 aa12.41□□□□□ -0.42
HMBOX1-216ENST00000561377 ZMYND10O75800 440 aa12.4□□□□□ -0.42
HMBOX1-216ENST00000561377 Q6ZNB5 142 aa12.4□□□□□ -0.42
HMBOX1-216ENST00000561377 ZC3H15Q8WU90 426 aaKnown RBP12.4□□□□□ -0.42
HMBOX1-216ENST00000561377 SALL2Q9Y467 1007 aaPredicted RBP12.4□□□□□ -0.42
HMBOX1-216ENST00000561377 KDM4AO75164 1064 aa12.39□□□□□ -0.43
HMBOX1-216ENST00000561377 THAP11Q96EK4 314 aa12.39□□□□□ -0.43
HMBOX1-216ENST00000561377 USP46P62068 366 aa12.37□□□□□ -0.43
HMBOX1-216ENST00000561377 NRG2O14511 850 aaPredicted RBP12.36□□□□□ -0.43
HMBOX1-216ENST00000561377 FAM217BQ9NTX9 383 aaPredicted RBP12.36□□□□□ -0.43
HMBOX1-216ENST00000561377 Q3C1V9 767 aa12.35□□□□□ -0.43
HMBOX1-216ENST00000561377 BRICD5Q6PL45 260 aa12.35□□□□□ -0.43
HMBOX1-216ENST00000561377 SPRYD7Q5W111 196 aa12.34□□□□□ -0.43
HMBOX1-216ENST00000561377 EMID1Q96A84 441 aaPredicted RBP12.34□□□□□ -0.43
HMBOX1-216ENST00000561377 PDZRN3Q9UPQ7 1066 aa12.34□□□□□ -0.43
HMBOX1-216ENST00000561377 MSS51Q4VC12 460 aa12.32□□□□□ -0.44
HMBOX1-216ENST00000561377 RNF19BQ6ZMZ0 732 aa12.32□□□□□ -0.44
HMBOX1-216ENST00000561377 LIAT1Q6ZQX7 453 aa12.32□□□□□ -0.44
HMBOX1-216ENST00000561377 ZNF598Q86UK7 904 aaKnown RBP12.32□□□□□ -0.44
HMBOX1-216ENST00000561377 FAM160A2Q8N612 972 aaPredicted RBP12.32□□□□□ -0.44
HMBOX1-216ENST00000561377 HOXA2O43364 376 aa12.3□□□□□ -0.44
HMBOX1-216ENST00000561377 TTLL12Q14166 644 aaPredicted RBP12.3□□□□□ -0.44
HMBOX1-216ENST00000561377 AMHR2Q16671 573 aa12.3□□□□□ -0.44
HMBOX1-216ENST00000561377 PLA2G2CQ5R387 149 aa12.3□□□□□ -0.44
HMBOX1-216ENST00000561377 NUTM1Q86Y26 1132 aa12.3□□□□□ -0.44
HMBOX1-216ENST00000561377 REPIN1Q9BWE0 567 aaKnown RBP12.29□□□□□ -0.44
HMBOX1-216ENST00000561377 FCF1Q9Y324 198 aaKnown RBP12.29□□□□□ -0.44
HMBOX1-216ENST00000561377 ZNF697Q5TEC3 545 aa12.28□□□□□ -0.44
HMBOX1-216ENST00000561377 SSTR3P32745 418 aaPredicted RBP12.27□□□□□ -0.45
HMBOX1-216ENST00000561377 PRDM9Q9NQV7 894 aa12.27□□□□□ -0.45
HMBOX1-216ENST00000561377 RPIAP49247 311 aa12.26□□□□□ -0.45
HMBOX1-216ENST00000561377 HLA-CQ95604 372 aa12.25□□□□□ -0.45
HMBOX1-216ENST00000561377 USB1Q9BQ65 265 aaKnown RBP12.25□□□□□ -0.45
HMBOX1-216ENST00000561377 TRAF7Q6Q0C0 670 aa12.24□□□□□ -0.45
HMBOX1-216ENST00000561377 TRIM67Q6ZTA4 783 aa12.24□□□□□ -0.45
HMBOX1-216ENST00000561377 PRR20EP86478 221 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms