RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 PCDHB3Q9Y5E6 796 aa11.64□□□□□ -0.55
USP8-216ENST00000561206 SLC4A3P48751 1232 aa11.62□□□□□ -0.55
USP8-216ENST00000561206 ZNF697Q5TEC3 545 aa11.62□□□□□ -0.55
USP8-216ENST00000561206 BLOC1S3Q6QNY0 202 aa11.62□□□□□ -0.55
USP8-216ENST00000561206 LIAT1Q6ZQX7 453 aa11.62□□□□□ -0.55
USP8-216ENST00000561206 EYA1Q99502 592 aa11.62□□□□□ -0.55
USP8-216ENST00000561206 NPDC1Q9NQX5 325 aaPredicted RBP11.61□□□□□ -0.55
USP8-216ENST00000561206 AAASQ9NRG9 546 aa11.61□□□□□ -0.55
USP8-216ENST00000561206 GRXCR2A6NFK2 248 aa11.6□□□□□ -0.55
USP8-216ENST00000561206 FAM187AA6NFU0 413 aa11.6□□□□□ -0.55
USP8-216ENST00000561206 CRIPAKQ8N1N5 446 aa11.59□□□□□ -0.55
USP8-216ENST00000561206 PADI6Q6TGC4 694 aa11.58□□□□□ -0.56
USP8-216ENST00000561206 TLL1O43897 1013 aa11.56□□□□□ -0.56
USP8-216ENST00000561206 LMOD2Q6P5Q4 547 aa11.56□□□□□ -0.56
USP8-216ENST00000561206 ST8SIA5O15466 376 aa11.55□□□□□ -0.56
USP8-216ENST00000561206 TNFRSF10AO00220 468 aa11.54□□□□□ -0.56
USP8-216ENST00000561206 S1PR4O95977 384 aa11.54□□□□□ -0.56
USP8-216ENST00000561206 STK17AQ9UEE5 414 aa11.54□□□□□ -0.56
USP8-216ENST00000561206 PPEF1O14829 653 aaPredicted RBP11.53□□□□□ -0.56
USP8-216ENST00000561206 E2F4Q16254 413 aa11.53□□□□□ -0.56
USP8-216ENST00000561206 WIPF1O43516 503 aa11.51□□□□□ -0.57
USP8-216ENST00000561206 ACTN4O43707 911 aaKnown RBP11.51□□□□□ -0.57
USP8-216ENST00000561206 WFS1O76024 890 aa11.5□□□□□ -0.57
USP8-216ENST00000561206 ADH1BP00325 375 aa11.5□□□□□ -0.57
USP8-216ENST00000561206 AVPP01185 164 aa11.5□□□□□ -0.57
USP8-216ENST00000561206 PKD2L1Q9P0L9 805 aa11.49□□□□□ -0.57
USP8-216ENST00000561206 PLA2G2CQ5R387 149 aa11.48□□□□□ -0.57
USP8-216ENST00000561206 NFX1Q12986 1120 aaKnown RBP11.47□□□□□ -0.57
USP8-216ENST00000561206 DNAJB2P25686 324 aa11.46□□□□□ -0.57
USP8-216ENST00000561206 KMT5BQ4FZB7 885 aa11.46□□□□□ -0.57
USP8-216ENST00000561206 TMEM134Q9H6X4 195 aa11.46□□□□□ -0.57
USP8-216ENST00000561206 DACH1Q9UI36 760 aa11.44□□□□□ -0.58
USP8-216ENST00000561206 SMCPP49901 116 aaPredicted RBP11.43□□□□□ -0.58
USP8-216ENST00000561206 INSM1Q01101 510 aaPredicted RBP11.43□□□□□ -0.58
USP8-216ENST00000561206 CTC1Q2NKJ3 1217 aa11.43□□□□□ -0.58
USP8-216ENST00000561206 SLC6A16Q9GZN6 736 aa11.43□□□□□ -0.58
USP8-216ENST00000561206 TOR4AQ9NXH8 423 aa11.43□□□□□ -0.58
USP8-216ENST00000561206 NR1I2O75469 434 aa11.42□□□□□ -0.58
USP8-216ENST00000561206 DCAF8L2P0C7V8 631 aa11.41□□□□□ -0.58
USP8-216ENST00000561206 RPIAP49247 311 aa11.4□□□□□ -0.58
USP8-216ENST00000561206 GMPR2Q9P2T1 348 aaKnown RBP11.4□□□□□ -0.58
USP8-216ENST00000561206 CFHP08603 1231 aa11.39□□□□□ -0.59
USP8-216ENST00000561206 C11orf95C9JLR9 678 aaPredicted RBP11.38□□□□□ -0.59
USP8-216ENST00000561206 AXIN1O15169 862 aa11.37□□□□□ -0.59
USP8-216ENST00000561206 RBM46Q8TBY0 533 aaKnown RBP11.37□□□□□ -0.59
USP8-216ENST00000561206 FOXC1Q12948 553 aa11.36□□□□□ -0.59
USP8-216ENST00000561206 ADGRG1Q9Y653 693 aa11.36□□□□□ -0.59
USP8-216ENST00000561206 LOC100996750A0A140TA64 210 aa11.35□□□□□ -0.59
USP8-216ENST00000561206 SLC10A3P09131 477 aa11.35□□□□□ -0.59
USP8-216ENST00000561206 KRTAP4-6Q9BYQ5 205 aa11.35□□□□□ -0.59
USP8-216ENST00000561206 LCE2CQ5TA81 110 aa11.34□□□□□ -0.59
USP8-216ENST00000561206 SCUBE3Q8IX30 993 aa11.34□□□□□ -0.59
USP8-216ENST00000561206 BBXQ8WY36 941 aaPredicted RBP11.34□□□□□ -0.59
USP8-216ENST00000561206 RCCD1A6NED2 376 aa11.33□□□□□ -0.6
USP8-216ENST00000561206 PTGDRQ13258 359 aa11.33□□□□□ -0.6
USP8-216ENST00000561206 CYP4X1Q8N118 509 aa11.3□□□□□ -0.6
USP8-216ENST00000561206 SPSB2Q99619 263 aa11.3□□□□□ -0.6
USP8-216ENST00000561206 WDR70Q9NW82 654 aa11.3□□□□□ -0.6
USP8-216ENST00000561206 CD2BP2O95400 341 aaKnown RBP11.29□□□□□ -0.6
USP8-216ENST00000561206 TERTO14746 1132 aaKnown RBP11.27□□□□□ -0.61
USP8-216ENST00000561206 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.26□□□□□ -0.61
USP8-216ENST00000561206 THAP11Q96EK4 314 aa11.23□□□□□ -0.61
USP8-216ENST00000561206 TRIM47Q96LD4 638 aa11.23□□□□□ -0.61
USP8-216ENST00000561206 ATP13A2Q9NQ11 1180 aa11.23□□□□□ -0.61
USP8-216ENST00000561206 FCF1Q9Y324 198 aaKnown RBP11.23□□□□□ -0.61
USP8-216ENST00000561206 SPRYD3Q8NCJ5 442 aa11.22□□□□□ -0.61
USP8-216ENST00000561206 SNRPBP14678 240 aaKnown RBP11.21□□□□□ -0.61
USP8-216ENST00000561206 PUS10Q3MIT2 529 aaKnown RBP11.2□□□□□ -0.62
USP8-216ENST00000561206 SENP2Q9HC62 589 aa11.2□□□□□ -0.62
USP8-216ENST00000561206 SMPD1P17405 629 aa11.19□□□□□ -0.62
USP8-216ENST00000561206 WNT7AO00755 349 aa11.18□□□□□ -0.62
USP8-216ENST00000561206 MLLT3P42568 568 aaPredicted RBP11.18□□□□□ -0.62
USP8-216ENST00000561206 FAM161AQ3B820 660 aa11.18□□□□□ -0.62
USP8-216ENST00000561206 MORN1Q5T089 497 aa11.18□□□□□ -0.62
USP8-216ENST00000561206 TTC24A2A3L6 582 aaPredicted RBP11.17□□□□□ -0.62
USP8-216ENST00000561206 RSPH4AQ5TD94 716 aa11.17□□□□□ -0.62
USP8-216ENST00000561206 FAM160A2Q8N612 972 aaPredicted RBP11.17□□□□□ -0.62
USP8-216ENST00000561206 PXYLP1Q8TE99 480 aa11.17□□□□□ -0.62
USP8-216ENST00000561206 SALL2Q9Y467 1007 aaPredicted RBP11.17□□□□□ -0.62
USP8-216ENST00000561206 SNIP1Q8TAD8 396 aaKnown RBP11.16□□□□□ -0.62
USP8-216ENST00000561206 FAM181BA6NEQ2 426 aa11.15□□□□□ -0.62
USP8-216ENST00000561206 OATP04181 439 aa11.14□□□□□ -0.63
USP8-216ENST00000561206 KIFC2Q96AC6 838 aa11.14□□□□□ -0.63
USP8-216ENST00000561206 LORP23490 312 aaPredicted RBP11.13□□□□□ -0.63
USP8-216ENST00000561206 ARHGEF1Q92888 912 aaKnown RBP11.13□□□□□ -0.63
USP8-216ENST00000561206 FMNL1O95466 1100 aaPredicted RBP11.11□□□□□ -0.63
USP8-216ENST00000561206 MSS51Q4VC12 460 aa11.1□□□□□ -0.63
USP8-216ENST00000561206 ZBTB24O43167 697 aaPredicted RBP11.09□□□□□ -0.63
USP8-216ENST00000561206 FCHSD2O94868 740 aa11.08□□□□□ -0.64
USP8-216ENST00000561206 ATP6V1AP38606 617 aa11.08□□□□□ -0.64
USP8-216ENST00000561206 BRICD5Q6PL45 260 aa11.08□□□□□ -0.64
USP8-216ENST00000561206 METTL3Q86U44 580 aaKnown RBP11.08□□□□□ -0.64
USP8-216ENST00000561206 SLC27A5Q9Y2P5 690 aa11.08□□□□□ -0.64
USP8-216ENST00000561206 FUT2Q10981 343 aa11.07□□□□□ -0.64
USP8-216ENST00000561206 NPAS3Q8IXF0 933 aa11.07□□□□□ -0.64
USP8-216ENST00000561206 PRDM9Q9NQV7 894 aa11.07□□□□□ -0.64
USP8-216ENST00000561206 J3QL48 77 aa11.06□□□□□ -0.64
USP8-216ENST00000561206 SLC16A10Q8TF71 515 aa11.06□□□□□ -0.64
USP8-216ENST00000561206 MRGPRX2Q96LB1 330 aa11.06□□□□□ -0.64
USP8-216ENST00000561206 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms