RNA–Protein interactions for RNA: ENST00000560983.1

HERC1-211, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-211ENST00000560983 MTRQ99707 1265 aa7.98□□□□□ -1.13
HERC1-211ENST00000560983 IL21Q9HBE4 155 aa7.98□□□□□ -1.13
HERC1-211ENST00000560983 HDGFP51858 240 aaKnown RBP7.97□□□□□ -1.13
HERC1-211ENST00000560983 ATAD2BQ9ULI0 1458 aa7.97□□□□□ -1.13
HERC1-211ENST00000560983 TMEM134Q9H6X4 195 aa7.96□□□□□ -1.14
HERC1-211ENST00000560983 GPR37O15354 613 aa7.95□□□□□ -1.14
HERC1-211ENST00000560983 FCHSD2O94868 740 aa7.95□□□□□ -1.14
HERC1-211ENST00000560983 DNAJB2P25686 324 aa7.95□□□□□ -1.14
HERC1-211ENST00000560983 NUTM2FA1L443 756 aa7.94□□□□□ -1.14
HERC1-211ENST00000560983 RBM46Q8TBY0 533 aaKnown RBP7.94□□□□□ -1.14
HERC1-211ENST00000560983 ZNF516Q92618 1163 aa7.93□□□□□ -1.14
HERC1-211ENST00000560983 IRX2Q9BZI1 471 aaPredicted RBP7.93□□□□□ -1.14
HERC1-211ENST00000560983 RCCD1A6NED2 376 aa7.92□□□□□ -1.14
HERC1-211ENST00000560983 RNF40O75150 1001 aa7.92□□□□□ -1.14
HERC1-211ENST00000560983 HIC1Q14526 733 aa7.92□□□□□ -1.14
HERC1-211ENST00000560983 CYB5RLQ6IPT4 315 aa7.92□□□□□ -1.14
HERC1-211ENST00000560983 KDM2AQ9Y2K7 1162 aa7.92□□□□□ -1.14
HERC1-211ENST00000560983 SMARCA2P51531 1590 aa7.92□□□□□ -1.14
HERC1-211ENST00000560983 RBM26Q5T8P6 1007 aaKnown RBP7.91□□□□□ -1.14
HERC1-211ENST00000560983 PXYLP1Q8TE99 480 aa7.91□□□□□ -1.14
HERC1-211ENST00000560983 PDS5BQ9NTI5 1447 aa7.91□□□□□ -1.14
HERC1-211ENST00000560983 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.9□□□□□ -1.14
HERC1-211ENST00000560983 FAM161AQ3B820 660 aa7.9□□□□□ -1.14
HERC1-211ENST00000560983 PRR14Q9BWN1 585 aa7.9□□□□□ -1.14
HERC1-211ENST00000560983 SMYD5Q6GMV2 418 aa7.89□□□□□ -1.15
HERC1-211ENST00000560983 PPP1R18Q6NYC8 613 aa7.89□□□□□ -1.15
HERC1-211ENST00000560983 BAZ1AQ9NRL2 1556 aaPredicted RBP7.88□□□□□ -1.15
HERC1-211ENST00000560983 OATP04181 439 aa7.88□□□□□ -1.15
HERC1-211ENST00000560983 SLC4A3P48751 1232 aa7.88□□□□□ -1.15
HERC1-211ENST00000560983 GNPATO15228 680 aa7.87□□□□□ -1.15
HERC1-211ENST00000560983 ACTN4O43707 911 aaKnown RBP7.87□□□□□ -1.15
HERC1-211ENST00000560983 ZPR1O75312 459 aa7.87□□□□□ -1.15
HERC1-211ENST00000560983 SLC10A3P09131 477 aa7.87□□□□□ -1.15
HERC1-211ENST00000560983 HAP1P54257 671 aaPredicted RBP7.87□□□□□ -1.15
HERC1-211ENST00000560983 METTL3Q86U44 580 aaKnown RBP7.87□□□□□ -1.15
HERC1-211ENST00000560983 NKX2-3Q8TAU0 364 aa7.87□□□□□ -1.15
HERC1-211ENST00000560983 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.87□□□□□ -1.15
HERC1-211ENST00000560983 RIMBP3CA6NJZ7 1639 aa7.87□□□□□ -1.15
HERC1-211ENST00000560983 RIMBP3BA6NNM3 1639 aa7.87□□□□□ -1.15
HERC1-211ENST00000560983 RIMBP3Q9UFD9 1639 aa7.87□□□□□ -1.15
HERC1-211ENST00000560983 LAMC3Q9Y6N6 1575 aa7.86□□□□□ -1.15
HERC1-211ENST00000560983 FECHP22830 423 aa7.86□□□□□ -1.15
HERC1-211ENST00000560983 HMGXB3Q12766 1538 aa7.86□□□□□ -1.15
HERC1-211ENST00000560983 COPS2P61201 443 aa7.85□□□□□ -1.15
HERC1-211ENST00000560983 PCDHB3Q9Y5E6 796 aa7.85□□□□□ -1.15
HERC1-211ENST00000560983 V9GY48 417 aaPredicted RBP7.85□□□□□ -1.15
HERC1-211ENST00000560983 MRC2Q9UBG0 1479 aa7.85□□□□□ -1.15
HERC1-211ENST00000560983 ARHGEF11O15085 1522 aa7.84□□□□□ -1.15
HERC1-211ENST00000560983 BLOC1S3Q6QNY0 202 aa7.84□□□□□ -1.15
HERC1-211ENST00000560983 TMUB1Q9BVT8 246 aa7.84□□□□□ -1.15
HERC1-211ENST00000560983 CFHP08603 1231 aa7.83□□□□□ -1.16
HERC1-211ENST00000560983 KMT5BQ4FZB7 885 aa7.83□□□□□ -1.16
HERC1-211ENST00000560983 WDR62O43379 1518 aa7.83□□□□□ -1.16
HERC1-211ENST00000560983 VSIG10Q8N0Z9 540 aa7.82□□□□□ -1.16
HERC1-211ENST00000560983 PRKD2Q9BZL6 878 aa7.82□□□□□ -1.16
HERC1-211ENST00000560983 KIF21AQ7Z4S6 1674 aa7.82□□□□□ -1.16
HERC1-211ENST00000560983 CADPSQ9ULU8 1353 aa7.82□□□□□ -1.16
HERC1-211ENST00000560983 LAPTM4AQ15012 233 aa7.8□□□□□ -1.16
HERC1-211ENST00000560983 DAXXQ9UER7 740 aaPredicted RBP7.8□□□□□ -1.16
HERC1-211ENST00000560983 BAZ1BQ9UIG0 1483 aaKnown RBP7.8□□□□□ -1.16
HERC1-211ENST00000560983 TLL1O43897 1013 aa7.79□□□□□ -1.16
HERC1-211ENST00000560983 GGCXP38435 758 aa7.79□□□□□ -1.16
HERC1-211ENST00000560983 EMID1Q96A84 441 aaPredicted RBP7.79□□□□□ -1.16
HERC1-211ENST00000560983 PHOX2BQ99453 314 aa7.79□□□□□ -1.16
HERC1-211ENST00000560983 LCE2BO14633 110 aa7.78□□□□□ -1.16
HERC1-211ENST00000560983 GPIHBP1Q8IV16 184 aa7.78□□□□□ -1.16
HERC1-211ENST00000560983 RNF223E7ERA6 249 aa7.77□□□□□ -1.17
HERC1-211ENST00000560983 ADH1BP00325 375 aa7.76□□□□□ -1.17
HERC1-211ENST00000560983 ARAP1Q96P48 1450 aa7.75□□□□□ -1.17
HERC1-211ENST00000560983 NRG2O14511 850 aaPredicted RBP7.75□□□□□ -1.17
HERC1-211ENST00000560983 GFRA3O60609 400 aa7.75□□□□□ -1.17
HERC1-211ENST00000560983 NR1I2O75469 434 aa7.75□□□□□ -1.17
HERC1-211ENST00000560983 ANKLE1Q8NAG6 615 aa7.75□□□□□ -1.17
HERC1-211ENST00000560983 Q6ZNB5 142 aa7.74□□□□□ -1.17
HERC1-211ENST00000560983 SCUBE3Q8IX30 993 aa7.74□□□□□ -1.17
HERC1-211ENST00000560983 S1PR4O95977 384 aa7.73□□□□□ -1.17
HERC1-211ENST00000560983 GCGRP47871 477 aa7.73□□□□□ -1.17
HERC1-211ENST00000560983 MAP2K5Q13163 448 aa7.73□□□□□ -1.17
HERC1-211ENST00000560983 MORN1Q5T089 497 aa7.73□□□□□ -1.17
HERC1-211ENST00000560983 RSPH4AQ5TD94 716 aa7.73□□□□□ -1.17
HERC1-211ENST00000560983 SMARCA4P51532 1647 aa7.72□□□□□ -1.17
HERC1-211ENST00000560983 TRIM67Q6ZTA4 783 aa7.72□□□□□ -1.17
HERC1-211ENST00000560983 NLRP7Q8WX94 980 aa7.72□□□□□ -1.17
HERC1-211ENST00000560983 THAP11Q96EK4 314 aa7.72□□□□□ -1.17
HERC1-211ENST00000560983 PUS10Q3MIT2 529 aaKnown RBP7.71□□□□□ -1.18
HERC1-211ENST00000560983 SULF1Q8IWU6 871 aa7.71□□□□□ -1.18
HERC1-211ENST00000560983 DDX11L8A8MPP1 907 aa7.7□□□□□ -1.18
HERC1-211ENST00000560983 FUT2Q10981 343 aa7.7□□□□□ -1.18
HERC1-211ENST00000560983 SPRYD7Q5W111 196 aa7.7□□□□□ -1.18
HERC1-211ENST00000560983 SLC6A16Q9GZN6 736 aa7.7□□□□□ -1.18
HERC1-211ENST00000560983 SALL2Q9Y467 1007 aaPredicted RBP7.7□□□□□ -1.18
HERC1-211ENST00000560983 CEP164Q9UPV0 1460 aa7.69□□□□□ -1.18
HERC1-211ENST00000560983 PEG3Q9GZU2 1588 aa7.69□□□□□ -1.18
HERC1-211ENST00000560983 PPEF1O14829 653 aaPredicted RBP7.69□□□□□ -1.18
HERC1-211ENST00000560983 IRF6O14896 467 aa7.69□□□□□ -1.18
HERC1-211ENST00000560983 ATP6V1AP38606 617 aa7.69□□□□□ -1.18
HERC1-211ENST00000560983 SLC19A1P41440 591 aa7.69□□□□□ -1.18
HERC1-211ENST00000560983 LIAT1Q6ZQX7 453 aa7.69□□□□□ -1.18
HERC1-211ENST00000560983 RDH13Q8NBN7 331 aa7.69□□□□□ -1.18
HERC1-211ENST00000560983 CD46P15529 392 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms