RNA–Protein interactions for RNA: ENST00000560894.1

THBS1-208, Transcript of thrombospondin 1, humanhuman

TSL 2

Gene THBS1, Length 537 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1-208ENST00000560894 ARID3CA6NKF2 412 aa8.61□□□□□ -1.03
THBS1-208ENST00000560894 ONECUT3O60422 494 aaPredicted RBP8.61□□□□□ -1.03
THBS1-208ENST00000560894 FOSBP53539 338 aa8.61□□□□□ -1.03
THBS1-208ENST00000560894 C6orf132Q5T0Z8 1188 aa8.61□□□□□ -1.03
THBS1-208ENST00000560894 NLRP7Q8WX94 980 aa8.61□□□□□ -1.03
THBS1-208ENST00000560894 ZDHHC16Q969W1 377 aa8.61□□□□□ -1.03
THBS1-208ENST00000560894 FAM217BQ9NTX9 383 aaPredicted RBP8.61□□□□□ -1.03
THBS1-208ENST00000560894 SKIV2LQ15477 1246 aaKnown RBP8.6□□□□□ -1.03
THBS1-208ENST00000560894 ADGRG1Q9Y653 693 aa8.6□□□□□ -1.03
THBS1-208ENST00000560894 APBB1O00213 710 aa8.59□□□□□ -1.03
THBS1-208ENST00000560894 PXYLP1Q8TE99 480 aa8.59□□□□□ -1.03
THBS1-208ENST00000560894 RBM27Q9P2N5 1060 aaKnown RBP8.59□□□□□ -1.03
THBS1-208ENST00000560894 RGS20O76081 388 aa8.58□□□□□ -1.04
THBS1-208ENST00000560894 MCM6Q14566 821 aa8.58□□□□□ -1.04
THBS1-208ENST00000560894 DMRTA1Q5VZB9 504 aa8.58□□□□□ -1.04
THBS1-208ENST00000560894 CLUAP1Q96AJ1 413 aa8.58□□□□□ -1.04
THBS1-208ENST00000560894 RBM46Q8TBY0 533 aaKnown RBP8.57□□□□□ -1.04
THBS1-208ENST00000560894 C1orf115Q9H7X2 142 aa8.57□□□□□ -1.04
THBS1-208ENST00000560894 POLR3EQ9NVU0 708 aa8.57□□□□□ -1.04
THBS1-208ENST00000560894 RIMBP3CA6NJZ7 1639 aa8.56□□□□□ -1.04
THBS1-208ENST00000560894 RIMBP3BA6NNM3 1639 aa8.56□□□□□ -1.04
THBS1-208ENST00000560894 RIMBP3Q9UFD9 1639 aa8.56□□□□□ -1.04
THBS1-208ENST00000560894 A6NJR5 290 aa8.56□□□□□ -1.04
THBS1-208ENST00000560894 PSEN2P49810 448 aa8.56□□□□□ -1.04
THBS1-208ENST00000560894 BAZ1AQ9NRL2 1556 aaPredicted RBP8.56□□□□□ -1.04
THBS1-208ENST00000560894 CLK2P49760 499 aaKnown RBP8.55□□□□□ -1.04
THBS1-208ENST00000560894 IFFO2Q5TF58 517 aa8.55□□□□□ -1.04
THBS1-208ENST00000560894 KCTD12Q96CX2 325 aaKnown RBP8.55□□□□□ -1.04
THBS1-208ENST00000560894 ADAM33Q9BZ11 813 aa8.55□□□□□ -1.04
THBS1-208ENST00000560894 NCAPD3P42695 1498 aa8.54□□□□□ -1.04
THBS1-208ENST00000560894 PRSS12P56730 875 aa8.54□□□□□ -1.04
THBS1-208ENST00000560894 DIXDC1Q155Q3 683 aa8.54□□□□□ -1.04
THBS1-208ENST00000560894 MYSM1Q5VVJ2 828 aa8.54□□□□□ -1.04
THBS1-208ENST00000560894 PROCA1Q8NCQ7 364 aaPredicted RBP8.54□□□□□ -1.04
THBS1-208ENST00000560894 CDCA7LQ96GN5 454 aa8.54□□□□□ -1.04
THBS1-208ENST00000560894 RAD21O60216 631 aa8.53□□□□□ -1.04
THBS1-208ENST00000560894 TRAK2O60296 914 aa8.53□□□□□ -1.04
THBS1-208ENST00000560894 TTC13Q8NBP0 860 aa8.53□□□□□ -1.04
THBS1-208ENST00000560894 PPP4R3BQ5MIZ7 849 aa8.52□□□□□ -1.05
THBS1-208ENST00000560894 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.51□□□□□ -1.05
THBS1-208ENST00000560894 PROSER2Q86WR7 435 aaPredicted RBP8.51□□□□□ -1.05
THBS1-208ENST00000560894 STAC3Q96MF2 364 aa8.51□□□□□ -1.05
THBS1-208ENST00000560894 TBC1D2Q9BYX2 928 aa8.51□□□□□ -1.05
THBS1-208ENST00000560894 SMARCA2P51531 1590 aa8.51□□□□□ -1.05
THBS1-208ENST00000560894 DCAF1Q9Y4B6 1507 aa8.5□□□□□ -1.05
THBS1-208ENST00000560894 CCDC82Q8N4S0 544 aa8.49□□□□□ -1.05
THBS1-208ENST00000560894 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.49□□□□□ -1.05
THBS1-208ENST00000560894 KIF21AQ7Z4S6 1674 aa8.49□□□□□ -1.05
THBS1-208ENST00000560894 RCCD1A6NED2 376 aa8.48□□□□□ -1.05
THBS1-208ENST00000560894 SPDYE5A6NIY4 337 aa8.48□□□□□ -1.05
THBS1-208ENST00000560894 SULF1Q8IWU6 871 aa8.48□□□□□ -1.05
THBS1-208ENST00000560894 NBPF26B4DH59 902 aa8.47□□□□□ -1.05
THBS1-208ENST00000560894 RFC5P40937 340 aa8.47□□□□□ -1.05
THBS1-208ENST00000560894 POM121Q96HA1 1249 aa8.47□□□□□ -1.05
THBS1-208ENST00000560894 IRX2Q9BZI1 471 aaPredicted RBP8.47□□□□□ -1.05
THBS1-208ENST00000560894 PODXL2Q9NZ53 605 aa8.47□□□□□ -1.05
THBS1-208ENST00000560894 ARHGEF11O15085 1522 aa8.46□□□□□ -1.05
THBS1-208ENST00000560894 PPP1R3GB7ZBB8 358 aa8.46□□□□□ -1.06
THBS1-208ENST00000560894 COL9A1P20849 921 aa8.46□□□□□ -1.06
THBS1-208ENST00000560894 PTPREP23469 700 aa8.46□□□□□ -1.06
THBS1-208ENST00000560894 NUTM1Q86Y26 1132 aa8.46□□□□□ -1.06
THBS1-208ENST00000560894 VPS9D1Q9Y2B5 631 aa8.46□□□□□ -1.06
THBS1-208ENST00000560894 A0A0G2JS52 829 aa8.45□□□□□ -1.06
THBS1-208ENST00000560894 DDX11L8A8MPP1 907 aa8.45□□□□□ -1.06
THBS1-208ENST00000560894 DNAJB2P25686 324 aa8.45□□□□□ -1.06
THBS1-208ENST00000560894 PTPN5P54829 565 aa8.45□□□□□ -1.06
THBS1-208ENST00000560894 RIC3Q7Z5B4 369 aa8.45□□□□□ -1.06
THBS1-208ENST00000560894 KCNH8Q96L42 1107 aa8.45□□□□□ -1.06
THBS1-208ENST00000560894 SLC4A5Q9BY07 1137 aa8.45□□□□□ -1.06
THBS1-208ENST00000560894 BCL2L12Q9HB09 334 aa8.45□□□□□ -1.06
THBS1-208ENST00000560894 LIMD1Q9UGP4 676 aa8.45□□□□□ -1.06
THBS1-208ENST00000560894 ZCCHC6Q5VYS8 1495 aaKnown RBP8.45□□□□□ -1.06
THBS1-208ENST00000560894 NUDT18Q6ZVK8 323 aa8.44□□□□□ -1.06
THBS1-208ENST00000560894 BANK1Q8NDB2 785 aa8.44□□□□□ -1.06
THBS1-208ENST00000560894 SPIRE2Q8WWL2 714 aa8.44□□□□□ -1.06
THBS1-208ENST00000560894 CCDC97Q96F63 343 aaPredicted RBP8.44□□□□□ -1.06
THBS1-208ENST00000560894 KCNK17Q96T54 332 aa8.44□□□□□ -1.06
THBS1-208ENST00000560894 FAM198AQ9UFP1 575 aa8.44□□□□□ -1.06
THBS1-208ENST00000560894 TSKSQ9UJT2 592 aa8.44□□□□□ -1.06
THBS1-208ENST00000560894 PNMA3Q9UL41 463 aa8.44□□□□□ -1.06
THBS1-208ENST00000560894 ZNF777Q9ULD5 760 aaPredicted RBP8.44□□□□□ -1.06
THBS1-208ENST00000560894 CD46P15529 392 aa8.43□□□□□ -1.06
THBS1-208ENST00000560894 CSPP1Q1MSJ5 1256 aa8.43□□□□□ -1.06
THBS1-208ENST00000560894 TMEM259Q4ZIN3 620 aa8.43□□□□□ -1.06
THBS1-208ENST00000560894 EYA1Q99502 592 aa8.43□□□□□ -1.06
THBS1-208ENST00000560894 PACS2Q86VP3 889 aa8.42□□□□□ -1.06
THBS1-208ENST00000560894 SNRKQ9NRH2 765 aa8.42□□□□□ -1.06
THBS1-208ENST00000560894 COG6Q9Y2V7 657 aa8.42□□□□□ -1.06
THBS1-208ENST00000560894 ATAD2BQ9ULI0 1458 aa8.42□□□□□ -1.06
THBS1-208ENST00000560894 LAMC3Q9Y6N6 1575 aa8.41□□□□□ -1.06
THBS1-208ENST00000560894 TRIM6-TRIM34B2RNG4 842 aa8.41□□□□□ -1.06
THBS1-208ENST00000560894 BHMG1C9JSJ3 638 aaPredicted RBP8.41□□□□□ -1.06
THBS1-208ENST00000560894 PPP2R2DQ66LE6 453 aa8.41□□□□□ -1.06
THBS1-208ENST00000560894 RSBN1LQ6PCB5 846 aaPredicted RBP8.41□□□□□ -1.06
THBS1-208ENST00000560894 THSD4Q6ZMP0 1018 aa8.41□□□□□ -1.06
THBS1-208ENST00000560894 RDH13Q8NBN7 331 aa8.41□□□□□ -1.06
THBS1-208ENST00000560894 TATDN2Q93075 761 aa8.41□□□□□ -1.06
THBS1-208ENST00000560894 CYB5RLQ6IPT4 315 aa8.4□□□□□ -1.06
THBS1-208ENST00000560894 WWC1Q8IX03 1113 aa8.4□□□□□ -1.06
THBS1-208ENST00000560894 FNBP4Q8N3X1 1017 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms