RNA–Protein interactions for RNA: ENST00000560868.1

CHRNB4-206, Transcript of cholinergic receptor nicotinic beta 4 subunit, humanhuman

TSL 2

Gene CHRNB4, Length 547 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB4-206ENST00000560868 AK7Q96M32 723 aa7.17□□□□□ -1.26
CHRNB4-206ENST00000560868 GNPATO15228 680 aa7.16□□□□□ -1.26
CHRNB4-206ENST00000560868 PNMA3Q9UL41 463 aa7.16□□□□□ -1.26
CHRNB4-206ENST00000560868 NBPF26B4DH59 902 aa7.15□□□□□ -1.26
CHRNB4-206ENST00000560868 HDGFP51858 240 aaKnown RBP7.15□□□□□ -1.26
CHRNB4-206ENST00000560868 MAP2K5Q13163 448 aa7.15□□□□□ -1.26
CHRNB4-206ENST00000560868 MINK1Q8N4C8 1332 aaPredicted RBP7.15□□□□□ -1.26
CHRNB4-206ENST00000560868 NUDT18Q6ZVK8 323 aa7.14□□□□□ -1.27
CHRNB4-206ENST00000560868 MTRQ99707 1265 aa7.14□□□□□ -1.27
CHRNB4-206ENST00000560868 CDHR5Q9HBB8 845 aa7.14□□□□□ -1.27
CHRNB4-206ENST00000560868 NPDC1Q9NQX5 325 aaPredicted RBP7.14□□□□□ -1.27
CHRNB4-206ENST00000560868 RNF40O75150 1001 aa7.13□□□□□ -1.27
CHRNB4-206ENST00000560868 IRF6O14896 467 aa7.12□□□□□ -1.27
CHRNB4-206ENST00000560868 TRIM66O15016 1216 aa7.12□□□□□ -1.27
CHRNB4-206ENST00000560868 GFRA3O60609 400 aa7.12□□□□□ -1.27
CHRNB4-206ENST00000560868 LAPTM4AQ15012 233 aa7.12□□□□□ -1.27
CHRNB4-206ENST00000560868 TMEM132AQ24JP5 1023 aa7.12□□□□□ -1.27
CHRNB4-206ENST00000560868 PPP1R18Q6NYC8 613 aa7.12□□□□□ -1.27
CHRNB4-206ENST00000560868 KRI1Q8N9T8 703 aaKnown RBP7.12□□□□□ -1.27
CHRNB4-206ENST00000560868 IL21Q9HBE4 155 aa7.12□□□□□ -1.27
CHRNB4-206ENST00000560868 EIF5BO60841 1220 aaKnown RBP7.11□□□□□ -1.27
CHRNB4-206ENST00000560868 NPM2Q86SE8 214 aaKnown RBP7.11□□□□□ -1.27
CHRNB4-206ENST00000560868 ZNF516Q92618 1163 aa7.11□□□□□ -1.27
CHRNB4-206ENST00000560868 CCDC102AQ96A19 550 aa7.11□□□□□ -1.27
CHRNB4-206ENST00000560868 PRKD2Q9BZL6 878 aa7.11□□□□□ -1.27
CHRNB4-206ENST00000560868 RBM27Q9P2N5 1060 aaKnown RBP7.11□□□□□ -1.27
CHRNB4-206ENST00000560868 FECHP22830 423 aa7.1□□□□□ -1.27
CHRNB4-206ENST00000560868 APLP1P51693 650 aa7.1□□□□□ -1.27
CHRNB4-206ENST00000560868 C14orf37Q86TY3 774 aa7.1□□□□□ -1.27
CHRNB4-206ENST00000560868 NEUROD2Q15784 382 aa7.09□□□□□ -1.27
CHRNB4-206ENST00000560868 AMHR2Q16671 573 aa7.09□□□□□ -1.27
CHRNB4-206ENST00000560868 LCE2BO14633 110 aa7.08□□□□□ -1.28
CHRNB4-206ENST00000560868 PDE4DQ08499 809 aa7.08□□□□□ -1.28
CHRNB4-206ENST00000560868 TRAF7Q6Q0C0 670 aa7.08□□□□□ -1.28
CHRNB4-206ENST00000560868 TTC13Q8NBP0 860 aa7.08□□□□□ -1.28
CHRNB4-206ENST00000560868 NKX2-3Q8TAU0 364 aa7.08□□□□□ -1.28
CHRNB4-206ENST00000560868 SWT1Q5T5J6 900 aaKnown RBP7.07□□□□□ -1.28
CHRNB4-206ENST00000560868 PADI6Q6TGC4 694 aa7.07□□□□□ -1.28
CHRNB4-206ENST00000560868 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.07□□□□□ -1.28
CHRNB4-206ENST00000560868 V9GY48 417 aaPredicted RBP7.06□□□□□ -1.28
CHRNB4-206ENST00000560868 COPS2P61201 443 aa7.05□□□□□ -1.28
CHRNB4-206ENST00000560868 SLF2Q8IX21 1173 aa7.05□□□□□ -1.28
CHRNB4-206ENST00000560868 NECTIN2Q92692 538 aa7.05□□□□□ -1.28
CHRNB4-206ENST00000560868 NRG2O14511 850 aaPredicted RBP7.04□□□□□ -1.28
CHRNB4-206ENST00000560868 EYA1Q99502 592 aa7.04□□□□□ -1.28
CHRNB4-206ENST00000560868 GPBP1L1Q9HC44 474 aaPredicted RBP7.04□□□□□ -1.28
CHRNB4-206ENST00000560868 KDM4CQ9H3R0 1056 aa7.03□□□□□ -1.28
CHRNB4-206ENST00000560868 GGCXP38435 758 aa7.02□□□□□ -1.29
CHRNB4-206ENST00000560868 SLC4A3P48751 1232 aa7.02□□□□□ -1.29
CHRNB4-206ENST00000560868 PARP9Q8IXQ6 854 aa7.02□□□□□ -1.29
CHRNB4-206ENST00000560868 TMUB1Q9BVT8 246 aa7.02□□□□□ -1.29
CHRNB4-206ENST00000560868 ADGRG1Q9Y653 693 aa7.02□□□□□ -1.29
CHRNB4-206ENST00000560868 ZPR1O75312 459 aa7.01□□□□□ -1.29
CHRNB4-206ENST00000560868 PDZRN3Q9UPQ7 1066 aa7.01□□□□□ -1.29
CHRNB4-206ENST00000560868 OATP04181 439 aa7□□□□□ -1.29
CHRNB4-206ENST00000560868 METTL3Q86U44 580 aaKnown RBP7□□□□□ -1.29
CHRNB4-206ENST00000560868 PHOX2BQ99453 314 aa7□□□□□ -1.29
CHRNB4-206ENST00000560868 PXYLP1Q8TE99 480 aa6.99□□□□□ -1.29
CHRNB4-206ENST00000560868 PCDHB3Q9Y5E6 796 aa6.99□□□□□ -1.29
CHRNB4-206ENST00000560868 PRR14Q9BWN1 585 aa6.98□□□□□ -1.29
CHRNB4-206ENST00000560868 CLCN1P35523 988 aa6.97□□□□□ -1.29
CHRNB4-206ENST00000560868 BLOC1S3Q6QNY0 202 aa6.97□□□□□ -1.29
CHRNB4-206ENST00000560868 DNAJB2P25686 324 aa6.96□□□□□ -1.3
CHRNB4-206ENST00000560868 TTLL12Q14166 644 aaPredicted RBP6.96□□□□□ -1.3
CHRNB4-206ENST00000560868 FAM161AQ3B820 660 aa6.96□□□□□ -1.3
CHRNB4-206ENST00000560868 GIGYF2Q6Y7W6 1299 aaKnown RBP6.96□□□□□ -1.3
CHRNB4-206ENST00000560868 DDRGK1Q96HY6 314 aa6.96□□□□□ -1.3
CHRNB4-206ENST00000560868 REPIN1Q9BWE0 567 aaKnown RBP6.96□□□□□ -1.3
CHRNB4-206ENST00000560868 GPCPD1Q9NPB8 672 aa6.96□□□□□ -1.3
CHRNB4-206ENST00000560868 RNF223E7ERA6 249 aa6.95□□□□□ -1.3
CHRNB4-206ENST00000560868 RBM46Q8TBY0 533 aaKnown RBP6.95□□□□□ -1.3
CHRNB4-206ENST00000560868 FAM117AQ9C073 453 aa6.95□□□□□ -1.3
CHRNB4-206ENST00000560868 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.94□□□□□ -1.3
CHRNB4-206ENST00000560868 PLEKHG3A1L390 1219 aa6.94□□□□□ -1.3
CHRNB4-206ENST00000560868 SLC19A1P41440 591 aa6.94□□□□□ -1.3
CHRNB4-206ENST00000560868 MDM2Q00987 491 aaPredicted RBP6.94□□□□□ -1.3
CHRNB4-206ENST00000560868 ZNF787Q6DD87 383 aa6.94□□□□□ -1.3
CHRNB4-206ENST00000560868 TMEM134Q9H6X4 195 aa6.94□□□□□ -1.3
CHRNB4-206ENST00000560868 MS4A1P11836 297 aa6.93□□□□□ -1.3
CHRNB4-206ENST00000560868 TRIM67Q6ZTA4 783 aa6.93□□□□□ -1.3
CHRNB4-206ENST00000560868 EMID1Q96A84 441 aaPredicted RBP6.93□□□□□ -1.3
CHRNB4-206ENST00000560868 RCCD1A6NED2 376 aa6.92□□□□□ -1.3
CHRNB4-206ENST00000560868 ACTN4O43707 911 aaKnown RBP6.92□□□□□ -1.3
CHRNB4-206ENST00000560868 TLL1O43897 1013 aa6.92□□□□□ -1.3
CHRNB4-206ENST00000560868 IL27Q8NEV9 243 aa6.92□□□□□ -1.3
CHRNB4-206ENST00000560868 FAM217BQ9NTX9 383 aaPredicted RBP6.92□□□□□ -1.3
CHRNB4-206ENST00000560868 PPEF1O14829 653 aaPredicted RBP6.91□□□□□ -1.3
CHRNB4-206ENST00000560868 KMT5BQ4FZB7 885 aa6.91□□□□□ -1.3
CHRNB4-206ENST00000560868 SPRYD7Q5W111 196 aa6.91□□□□□ -1.3
CHRNB4-206ENST00000560868 GOPCQ9HD26 462 aa6.91□□□□□ -1.3
CHRNB4-206ENST00000560868 S1PR4O95977 384 aa6.9□□□□□ -1.3
CHRNB4-206ENST00000560868 CFHP08603 1231 aa6.9□□□□□ -1.3
CHRNB4-206ENST00000560868 SLC10A3P09131 477 aa6.9□□□□□ -1.3
CHRNB4-206ENST00000560868 TRIM26Q12899 539 aaPredicted RBP6.9□□□□□ -1.3
CHRNB4-206ENST00000560868 ZNF598Q86UK7 904 aaKnown RBP6.9□□□□□ -1.3
CHRNB4-206ENST00000560868 ANKLE1Q8NAG6 615 aa6.9□□□□□ -1.3
CHRNB4-206ENST00000560868 SSTR3P32745 418 aaPredicted RBP6.89□□□□□ -1.31
CHRNB4-206ENST00000560868 NLRP7Q8WX94 980 aa6.89□□□□□ -1.31
CHRNB4-206ENST00000560868 SUPT5HO00267 1087 aaKnown RBP6.88□□□□□ -1.31
CHRNB4-206ENST00000560868 LIAT1Q6ZQX7 453 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms