RNA–Protein interactions for RNA: ENST00000560842.1

PSMA4-221, Transcript of proteasome subunit alpha 4, humanhuman

TSL 1 (best)

Gene PSMA4, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA4-221ENST00000560842 ZNF775Q96BV0 537 aaPredicted RBP11.58□□□□□ -0.56
PSMA4-221ENST00000560842 EMID1Q96A84 441 aaPredicted RBP11.57□□□□□ -0.56
PSMA4-221ENST00000560842 BLOC1S3Q6QNY0 202 aa11.56□□□□□ -0.56
PSMA4-221ENST00000560842 SPRYD7Q5W111 196 aa11.53□□□□□ -0.56
PSMA4-221ENST00000560842 DGAT1O75907 488 aa11.52□□□□□ -0.57
PSMA4-221ENST00000560842 DNAJB2P25686 324 aa11.52□□□□□ -0.57
PSMA4-221ENST00000560842 ZNF598Q86UK7 904 aaKnown RBP11.52□□□□□ -0.57
PSMA4-221ENST00000560842 ANKLE1Q8NAG6 615 aa11.52□□□□□ -0.57
PSMA4-221ENST00000560842 TSHZ2Q9NRE2 1034 aa11.52□□□□□ -0.57
PSMA4-221ENST00000560842 PRR20EP86478 221 aa11.51□□□□□ -0.57
PSMA4-221ENST00000560842 PRR20CP86479 221 aa11.51□□□□□ -0.57
PSMA4-221ENST00000560842 PRR20DP86480 221 aa11.51□□□□□ -0.57
PSMA4-221ENST00000560842 PRR20BP86481 221 aa11.51□□□□□ -0.57
PSMA4-221ENST00000560842 PRR20AP86496 221 aa11.51□□□□□ -0.57
PSMA4-221ENST00000560842 PKDCCQ504Y2 493 aa11.51□□□□□ -0.57
PSMA4-221ENST00000560842 SLC24A1O60721 1099 aa11.5□□□□□ -0.57
PSMA4-221ENST00000560842 MYT1Q01538 1121 aa11.5□□□□□ -0.57
PSMA4-221ENST00000560842 ACTN4O43707 911 aaKnown RBP11.49□□□□□ -0.57
PSMA4-221ENST00000560842 TLL1O43897 1013 aa11.49□□□□□ -0.57
PSMA4-221ENST00000560842 TMEM134Q9H6X4 195 aa11.49□□□□□ -0.57
PSMA4-221ENST00000560842 HAP1P54257 671 aaPredicted RBP11.48□□□□□ -0.57
PSMA4-221ENST00000560842 PTGDRQ13258 359 aa11.48□□□□□ -0.57
PSMA4-221ENST00000560842 RBM46Q8TBY0 533 aaKnown RBP11.48□□□□□ -0.57
PSMA4-221ENST00000560842 PPEF1O14829 653 aaPredicted RBP11.47□□□□□ -0.57
PSMA4-221ENST00000560842 MLLT3P42568 568 aaPredicted RBP11.47□□□□□ -0.57
PSMA4-221ENST00000560842 KMT5BQ4FZB7 885 aa11.47□□□□□ -0.57
PSMA4-221ENST00000560842 LIAT1Q6ZQX7 453 aa11.47□□□□□ -0.57
PSMA4-221ENST00000560842 S1PR4O95977 384 aa11.46□□□□□ -0.57
PSMA4-221ENST00000560842 ADGRG1Q9Y653 693 aa11.46□□□□□ -0.57
PSMA4-221ENST00000560842 ARHGEF1Q92888 912 aaKnown RBP11.45□□□□□ -0.58
PSMA4-221ENST00000560842 ZNF697Q5TEC3 545 aa11.44□□□□□ -0.58
PSMA4-221ENST00000560842 RCCD1A6NED2 376 aa11.43□□□□□ -0.58
PSMA4-221ENST00000560842 GDF9O60383 454 aa11.43□□□□□ -0.58
PSMA4-221ENST00000560842 VSIG10Q8N0Z9 540 aa11.43□□□□□ -0.58
PSMA4-221ENST00000560842 POTECB2RU33 542 aa11.42□□□□□ -0.58
PSMA4-221ENST00000560842 CFHP08603 1231 aa11.42□□□□□ -0.58
PSMA4-221ENST00000560842 ADH1BP00325 375 aa11.41□□□□□ -0.58
PSMA4-221ENST00000560842 SLC10A3P09131 477 aa11.4□□□□□ -0.58
PSMA4-221ENST00000560842 FAM187AA6NFU0 413 aa11.39□□□□□ -0.59
PSMA4-221ENST00000560842 NR1I2O75469 434 aa11.39□□□□□ -0.59
PSMA4-221ENST00000560842 TNFRSF10AO00220 468 aa11.38□□□□□ -0.59
PSMA4-221ENST00000560842 FAM161AQ3B820 660 aa11.38□□□□□ -0.59
PSMA4-221ENST00000560842 SLC6A16Q9GZN6 736 aa11.38□□□□□ -0.59
PSMA4-221ENST00000560842 KDM2AQ9Y2K7 1162 aa11.38□□□□□ -0.59
PSMA4-221ENST00000560842 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.36□□□□□ -0.59
PSMA4-221ENST00000560842 PLA2G2CQ5R387 149 aa11.36□□□□□ -0.59
PSMA4-221ENST00000560842 SCUBE3Q8IX30 993 aa11.35□□□□□ -0.59
PSMA4-221ENST00000560842 NUTM2FA1L443 756 aa11.34□□□□□ -0.59
PSMA4-221ENST00000560842 KCNV2Q8TDN2 545 aa11.34□□□□□ -0.59
PSMA4-221ENST00000560842 AAASQ9NRG9 546 aa11.33□□□□□ -0.6
PSMA4-221ENST00000560842 LMOD2Q6P5Q4 547 aa11.31□□□□□ -0.6
PSMA4-221ENST00000560842 ST8SIA5O15466 376 aa11.3□□□□□ -0.6
PSMA4-221ENST00000560842 FCHSD2O94868 740 aa11.3□□□□□ -0.6
PSMA4-221ENST00000560842 OATP04181 439 aa11.3□□□□□ -0.6
PSMA4-221ENST00000560842 PXYLP1Q8TE99 480 aa11.3□□□□□ -0.6
PSMA4-221ENST00000560842 PKD2L1Q9P0L9 805 aa11.3□□□□□ -0.6
PSMA4-221ENST00000560842 LCE2AQ5TA79 106 aaPredicted RBP11.29□□□□□ -0.6
PSMA4-221ENST00000560842 TREML4Q6UXN2 200 aa11.29□□□□□ -0.6
PSMA4-221ENST00000560842 SPSB2Q99619 263 aa11.29□□□□□ -0.6
PSMA4-221ENST00000560842 PUS10Q3MIT2 529 aaKnown RBP11.28□□□□□ -0.6
PSMA4-221ENST00000560842 RSPH4AQ5TD94 716 aa11.28□□□□□ -0.6
PSMA4-221ENST00000560842 RPIAP49247 311 aa11.26□□□□□ -0.61
PSMA4-221ENST00000560842 FOXC1Q12948 553 aa11.26□□□□□ -0.61
PSMA4-221ENST00000560842 CRIPAKQ8N1N5 446 aa11.26□□□□□ -0.61
PSMA4-221ENST00000560842 AVPP01185 164 aa11.23□□□□□ -0.61
PSMA4-221ENST00000560842 TOR4AQ9NXH8 423 aa11.23□□□□□ -0.61
PSMA4-221ENST00000560842 METTL3Q86U44 580 aaKnown RBP11.22□□□□□ -0.61
PSMA4-221ENST00000560842 CD2BP2O95400 341 aaKnown RBP11.21□□□□□ -0.61
PSMA4-221ENST00000560842 DACH1Q9UI36 760 aa11.21□□□□□ -0.61
PSMA4-221ENST00000560842 MORN1Q5T089 497 aa11.2□□□□□ -0.62
PSMA4-221ENST00000560842 THAP11Q96EK4 314 aa11.2□□□□□ -0.62
PSMA4-221ENST00000560842 HIC1Q14526 733 aa11.19□□□□□ -0.62
PSMA4-221ENST00000560842 FCF1Q9Y324 198 aaKnown RBP11.19□□□□□ -0.62
PSMA4-221ENST00000560842 SEMA3EO15041 775 aa11.18□□□□□ -0.62
PSMA4-221ENST00000560842 DAXXQ9UER7 740 aaPredicted RBP11.18□□□□□ -0.62
PSMA4-221ENST00000560842 CTC1Q2NKJ3 1217 aa11.17□□□□□ -0.62
PSMA4-221ENST00000560842 CYP4X1Q8N118 509 aa11.17□□□□□ -0.62
PSMA4-221ENST00000560842 FAM160A2Q8N612 972 aaPredicted RBP11.17□□□□□ -0.62
PSMA4-221ENST00000560842 AXIN1O15169 862 aa11.16□□□□□ -0.62
PSMA4-221ENST00000560842 ATP6V1AP38606 617 aa11.16□□□□□ -0.62
PSMA4-221ENST00000560842 SMCPP49901 116 aaPredicted RBP11.16□□□□□ -0.62
PSMA4-221ENST00000560842 GMPR2Q9P2T1 348 aaKnown RBP11.16□□□□□ -0.62
PSMA4-221ENST00000560842 FMNL1O95466 1100 aaPredicted RBP11.15□□□□□ -0.62
PSMA4-221ENST00000560842 FUT2Q10981 343 aa11.15□□□□□ -0.62
PSMA4-221ENST00000560842 P3H3Q8IVL6 736 aa11.15□□□□□ -0.62
PSMA4-221ENST00000560842 RDH13Q8NBN7 331 aa11.15□□□□□ -0.62
PSMA4-221ENST00000560842 SALL2Q9Y467 1007 aaPredicted RBP11.15□□□□□ -0.62
PSMA4-221ENST00000560842 C11orf95C9JLR9 678 aaPredicted RBP11.13□□□□□ -0.63
PSMA4-221ENST00000560842 WFS1O76024 890 aa11.13□□□□□ -0.63
PSMA4-221ENST00000560842 SLC27A5Q9Y2P5 690 aa11.13□□□□□ -0.63
PSMA4-221ENST00000560842 DDX11L8A8MPP1 907 aa11.11□□□□□ -0.63
PSMA4-221ENST00000560842 FECHP22830 423 aa11.11□□□□□ -0.63
PSMA4-221ENST00000560842 GCGRP47871 477 aa11.11□□□□□ -0.63
PSMA4-221ENST00000560842 BRICD5Q6PL45 260 aa11.11□□□□□ -0.63
PSMA4-221ENST00000560842 GNPATO15228 680 aa11.1□□□□□ -0.63
PSMA4-221ENST00000560842 ZBTB24O43167 697 aaPredicted RBP11.09□□□□□ -0.63
PSMA4-221ENST00000560842 NFX1Q12986 1120 aaKnown RBP11.09□□□□□ -0.63
PSMA4-221ENST00000560842 RBM26Q5T8P6 1007 aaKnown RBP11.09□□□□□ -0.63
PSMA4-221ENST00000560842 PRDM9Q9NQV7 894 aa11.09□□□□□ -0.63
PSMA4-221ENST00000560842 TTC24A2A3L6 582 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms