RNA–Protein interactions for RNA: ENST00000560801.5

TRPM1-212, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 1 (best)

Gene TRPM1, Length 4,454 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-212ENST00000560801 U2AF1Q01081 240 aaKnown RBP eCLIP12.69□□□□□ -0.38
TRPM1-212ENST00000560801 SUPT6HQ7KZ85 1726 aaKnown RBP12.69□□□□□ -0.38
TRPM1-212ENST00000560801 HFM1A2PYH4 1435 aa12.69□□□□□ -0.38
TRPM1-212ENST00000560801 ANKRD30BQ9BXX2 1392 aa12.68□□□□□ -0.38
TRPM1-212ENST00000560801 GPATCH8Q9UKJ3 1502 aaKnown RBP12.68□□□□□ -0.38
TRPM1-212ENST00000560801 ZC3H6P61129 1189 aaKnown RBP12.67□□□□□ -0.38
TRPM1-212ENST00000560801 C19orf44Q9H6X5 657 aa12.67□□□□□ -0.38
TRPM1-212ENST00000560801 TSPOAP1O95153 1857 aa12.67□□□□□ -0.38
TRPM1-212ENST00000560801 PHF8Q9UPP1 1060 aa12.67□□□□□ -0.38
TRPM1-212ENST00000560801 PCF11O94913 1555 aaKnown RBP12.67□□□□□ -0.38
TRPM1-212ENST00000560801 KIAA1107Q9UPP5 1409 aa12.66□□□□□ -0.38
TRPM1-212ENST00000560801 ST20-MTHFSA0A0A6YYL1 179 aa12.66□□□□□ -0.38
TRPM1-212ENST00000560801 KDM5BQ9UGL1 1544 aa12.66□□□□□ -0.38
TRPM1-212ENST00000560801 G3V3G9 751 aa12.65□□□□□ -0.38
TRPM1-212ENST00000560801 HSPA5P11021 654 aaKnown RBP12.65□□□□□ -0.38
TRPM1-212ENST00000560801 DCAF8Q5TAQ9 597 aa12.65□□□□□ -0.38
TRPM1-212ENST00000560801 LRRC59Q96AG4 307 aaKnown RBP12.65□□□□□ -0.38
TRPM1-212ENST00000560801 CGNL1Q0VF96 1302 aa12.64□□□□□ -0.39
TRPM1-212ENST00000560801 GOLGA2Q08379 1002 aa12.64□□□□□ -0.39
TRPM1-212ENST00000560801 WAPLQ7Z5K2 1190 aa12.64□□□□□ -0.39
TRPM1-212ENST00000560801 CDK19Q9BWU1 502 aa12.64□□□□□ -0.39
TRPM1-212ENST00000560801 ZFYVE16Q7Z3T8 1539 aa12.64□□□□□ -0.39
TRPM1-212ENST00000560801 RTEL1-TNFRSF6BF6WH68 1400 aa12.64□□□□□ -0.39
TRPM1-212ENST00000560801 TTC5Q8N0Z6 440 aa12.64□□□□□ -0.39
TRPM1-212ENST00000560801 TEFQ10587 303 aa12.63□□□□□ -0.39
TRPM1-212ENST00000560801 TIAM1Q13009 1591 aa12.63□□□□□ -0.39
TRPM1-212ENST00000560801 HMGB2P26583 209 aaKnown RBP12.63□□□□□ -0.39
TRPM1-212ENST00000560801 KRT28Q7Z3Y7 464 aa12.63□□□□□ -0.39
TRPM1-212ENST00000560801 CHMP4AQ9BY43 222 aa12.63□□□□□ -0.39
TRPM1-212ENST00000560801 NPHP3Q7Z494 1330 aa12.63□□□□□ -0.39
TRPM1-212ENST00000560801 ZNF692Q9BU19 519 aaPredicted RBP12.62□□□□□ -0.39
TRPM1-212ENST00000560801 SYCP2Q9BX26 1530 aa12.61□□□□□ -0.39
TRPM1-212ENST00000560801 DDX54Q8TDD1 881 aaKnown RBP12.61□□□□□ -0.39
TRPM1-212ENST00000560801 HNRNPUQ00839 825 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRPM1-212ENST00000560801 CCDC61Q9Y6R9 512 aa12.6□□□□□ -0.39
TRPM1-212ENST00000560801 MYH16Q9H6N6 1097 aa12.6□□□□□ -0.39
TRPM1-212ENST00000560801 ABCC5O15440 1437 aa12.6□□□□□ -0.39
TRPM1-212ENST00000560801 KCNA6P17658 529 aa12.6□□□□□ -0.39
TRPM1-212ENST00000560801 DAXXQ9UER7 740 aaPredicted RBP12.6□□□□□ -0.39
TRPM1-212ENST00000560801 ERCC6L2Q5T890 1561 aa12.6□□□□□ -0.39
TRPM1-212ENST00000560801 YEATS2Q9ULM3 1422 aa12.59□□□□□ -0.39
TRPM1-212ENST00000560801 CERKQ8TCT0 537 aa12.59□□□□□ -0.39
TRPM1-212ENST00000560801 CABP1Q9NZU7 370 aa12.59□□□□□ -0.39
TRPM1-212ENST00000560801 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.58□□□□□ -0.39
TRPM1-212ENST00000560801 NUDT16Q96DE0 195 aaKnown RBP12.58□□□□□ -0.39
TRPM1-212ENST00000560801 DISP3Q9P2K9 1392 aa12.58□□□□□ -0.4
TRPM1-212ENST00000560801 TATP17735 454 aaPredicted RBP12.58□□□□□ -0.4
TRPM1-212ENST00000560801 CTTNBP2Q8WZ74 1663 aa12.57□□□□□ -0.4
TRPM1-212ENST00000560801 ROCK1Q13464 1354 aa12.57□□□□□ -0.4
TRPM1-212ENST00000560801 TBX22Q9Y458 520 aa12.56□□□□□ -0.4
TRPM1-212ENST00000560801 CALD1Q05682 793 aaKnown RBP12.56□□□□□ -0.4
TRPM1-212ENST00000560801 SLAIN2Q9P270 581 aa12.56□□□□□ -0.4
TRPM1-212ENST00000560801 KCNH5Q8NCM2 988 aa12.56□□□□□ -0.4
TRPM1-212ENST00000560801 RIMS2Q9UQ26 1411 aa12.56□□□□□ -0.4
TRPM1-212ENST00000560801 SENP3-EIF4A1A0A087X0R7 540 aa12.56□□□□□ -0.4
TRPM1-212ENST00000560801 NCOA1Q15788 1441 aa12.56□□□□□ -0.4
TRPM1-212ENST00000560801 KTN1Q86UP2 1357 aaKnown RBP12.55□□□□□ -0.4
TRPM1-212ENST00000560801 GGNBP2Q9H3C7 697 aa12.55□□□□□ -0.4
TRPM1-212ENST00000560801 MAGI2Q86UL8 1455 aa12.55□□□□□ -0.4
TRPM1-212ENST00000560801 BCL11BQ9C0K0 894 aaPredicted RBP12.54□□□□□ -0.4
TRPM1-212ENST00000560801 PANK3Q9H999 370 aa12.53□□□□□ -0.4
TRPM1-212ENST00000560801 WASHC2AQ641Q2 1341 aa12.53□□□□□ -0.4
TRPM1-212ENST00000560801 RBM42Q9BTD8 480 aaKnown RBP12.53□□□□□ -0.4
TRPM1-212ENST00000560801 LMOD3Q0VAK6 560 aa12.52□□□□□ -0.4
TRPM1-212ENST00000560801 SMG6Q86US8 1419 aaKnown RBP12.52□□□□□ -0.4
TRPM1-212ENST00000560801 ZNF335Q9H4Z2 1342 aaPredicted RBP12.52□□□□□ -0.41
TRPM1-212ENST00000560801 STK31Q9BXU1 1019 aa12.51□□□□□ -0.41
TRPM1-212ENST00000560801 NBPF8Q3BBV2 869 aa12.51□□□□□ -0.41
TRPM1-212ENST00000560801 NBPF14Q5TI25 921 aa12.51□□□□□ -0.41
TRPM1-212ENST00000560801 EXOC5O00471 708 aa12.51□□□□□ -0.41
TRPM1-212ENST00000560801 OS9Q13438 667 aaPredicted RBP12.51□□□□□ -0.41
TRPM1-212ENST00000560801 DUOX2Q9NRD8 1548 aa12.5□□□□□ -0.41
TRPM1-212ENST00000560801 NBPF1Q3BBV0 1214 aa12.5□□□□□ -0.41
TRPM1-212ENST00000560801 CLASP1Q7Z460 1538 aa12.49□□□□□ -0.41
TRPM1-212ENST00000560801 WASLO00401 505 aaPredicted RBP12.49□□□□□ -0.41
TRPM1-212ENST00000560801 PLEKHO1Q53GL0 409 aaPredicted RBP12.49□□□□□ -0.41
TRPM1-212ENST00000560801 TAF7LQ5H9L4 462 aa12.49□□□□□ -0.41
TRPM1-212ENST00000560801 MAGI3Q5TCQ9 1506 aa12.49□□□□□ -0.41
TRPM1-212ENST00000560801 NGEFQ8N5V2 710 aa12.49□□□□□ -0.41
TRPM1-212ENST00000560801 USP47Q96K76 1375 aa12.49□□□□□ -0.41
TRPM1-212ENST00000560801 ADGRF5Q8IZF2 1346 aa12.49□□□□□ -0.41
TRPM1-212ENST00000560801 CFAP74Q9C0B2 1584 aa12.48□□□□□ -0.41
TRPM1-212ENST00000560801 DIAPH1O60610 1272 aaKnown RBP12.48□□□□□ -0.41
TRPM1-212ENST00000560801 SPG7Q9UQ90 795 aa12.48□□□□□ -0.41
TRPM1-212ENST00000560801 CHRNA2Q15822 529 aa12.48□□□□□ -0.41
TRPM1-212ENST00000560801 FTSJ3Q8IY81 847 aaKnown RBP12.47□□□□□ -0.41
TRPM1-212ENST00000560801 CHMP3Q9Y3E7 222 aa12.47□□□□□ -0.41
TRPM1-212ENST00000560801 NOS1P29475 1434 aa12.47□□□□□ -0.41
TRPM1-212ENST00000560801 ZNF772Q68DY9 489 aaPredicted RBP12.47□□□□□ -0.41
TRPM1-212ENST00000560801 ATAD2Q6PL18 1390 aa12.47□□□□□ -0.41
TRPM1-212ENST00000560801 ATP7AQ04656 1500 aa12.47□□□□□ -0.41
TRPM1-212ENST00000560801 SLC12A5Q9H2X9 1139 aa12.47□□□□□ -0.41
TRPM1-212ENST00000560801 PTPN23Q9H3S7 1636 aa12.46□□□□□ -0.41
TRPM1-212ENST00000560801 USP21Q9UK80 565 aa12.46□□□□□ -0.41
TRPM1-212ENST00000560801 ERICH6Q7L0X2 663 aa12.45□□□□□ -0.42
TRPM1-212ENST00000560801 MAPKBP1O60336 1514 aa12.44□□□□□ -0.42
TRPM1-212ENST00000560801 CABLES1Q8TDN4 633 aa12.44□□□□□ -0.42
TRPM1-212ENST00000560801 ABCA8O94911 1581 aa12.44□□□□□ -0.42
TRPM1-212ENST00000560801 NPHP4O75161 1426 aaPredicted RBP12.44□□□□□ -0.42
TRPM1-212ENST00000560801 RXRBP28702 533 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms