RNA–Protein interactions for RNA: ENST00000560660.1

IVD-212, Transcript of isovaleryl-CoA dehydrogenase, humanhuman

TSL 2

Gene IVD, Length 638 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IVD-212ENST00000560660 KANK1Q14678 1352 aa18.79■□□□□ 0.6
IVD-212ENST00000560660 KIF15Q9NS87 1388 aa18.79■□□□□ 0.6
IVD-212ENST00000560660 KDM5AP29375 1690 aaKnown RBP18.76■□□□□ 0.59
IVD-212ENST00000560660 MYOM3Q5VTT5 1437 aa18.75■□□□□ 0.59
IVD-212ENST00000560660 ERBINQ96RT1 1412 aa18.74■□□□□ 0.59
IVD-212ENST00000560660 ATF3P18847 181 aa18.74■□□□□ 0.59
IVD-212ENST00000560660 AFF2P51816 1311 aa18.74■□□□□ 0.59
IVD-212ENST00000560660 PPP1R15AO75807 674 aaPredicted RBP18.73■□□□□ 0.59
IVD-212ENST00000560660 KANK4Q5T7N3 995 aaPredicted RBP18.73■□□□□ 0.59
IVD-212ENST00000560660 CADPS2Q86UW7 1296 aa18.73■□□□□ 0.59
IVD-212ENST00000560660 SLC52A1Q9NWF4 448 aa18.73■□□□□ 0.59
IVD-212ENST00000560660 CDK12Q9NYV4 1490 aaPredicted RBP18.72■□□□□ 0.59
IVD-212ENST00000560660 C19orf44Q9H6X5 657 aa18.72■□□□□ 0.59
IVD-212ENST00000560660 CHD2O14647 1828 aaKnown RBP18.72■□□□□ 0.59
IVD-212ENST00000560660 PLEKHG1Q9ULL1 1385 aa18.7■□□□□ 0.58
IVD-212ENST00000560660 ADGRB3O60242 1522 aa18.7■□□□□ 0.58
IVD-212ENST00000560660 SHPRHQ149N8 1683 aa18.7■□□□□ 0.58
IVD-212ENST00000560660 NOS1P29475 1434 aa18.7■□□□□ 0.58
IVD-212ENST00000560660 HDGFP51858 240 aaKnown RBP18.7■□□□□ 0.58
IVD-212ENST00000560660 NUTM2DQ5VT03 806 aaPredicted RBP18.7■□□□□ 0.58
IVD-212ENST00000560660 QTRT2Q9H974 415 aaKnown RBP18.7■□□□□ 0.58
IVD-212ENST00000560660 TBX22Q9Y458 520 aa18.7■□□□□ 0.58
IVD-212ENST00000560660 NCOA3Q9Y6Q9 1424 aa18.7■□□□□ 0.58
IVD-212ENST00000560660 AHDC1Q5TGY3 1603 aaPredicted RBP18.69■□□□□ 0.58
IVD-212ENST00000560660 ABCC5O15440 1437 aa18.68■□□□□ 0.58
IVD-212ENST00000560660 BRINP3Q76B58 766 aa18.68■□□□□ 0.58
IVD-212ENST00000560660 CHIC2Q9UKJ5 165 aa18.68■□□□□ 0.58
IVD-212ENST00000560660 RBM6P78332 1123 aaKnown RBP18.67■□□□□ 0.58
IVD-212ENST00000560660 LMTK2Q8IWU2 1503 aa18.67■□□□□ 0.58
IVD-212ENST00000560660 ZFYVE9O95405 1425 aa18.66■□□□□ 0.58
IVD-212ENST00000560660 C8orf37Q96NL8 207 aa18.66■□□□□ 0.58
IVD-212ENST00000560660 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.66■□□□□ 0.58
IVD-212ENST00000560660 RIMS2Q9UQ26 1411 aa18.66■□□□□ 0.58
IVD-212ENST00000560660 RGS12O14924 1447 aa18.65■□□□□ 0.58
IVD-212ENST00000560660 CHGAP10645 457 aaKnown RBP18.63■□□□□ 0.57
IVD-212ENST00000560660 DIP2AQ14689 1571 aa18.63■□□□□ 0.57
IVD-212ENST00000560660 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.61■□□□□ 0.57
IVD-212ENST00000560660 LRRC59Q96AG4 307 aaKnown RBP18.61■□□□□ 0.57
IVD-212ENST00000560660 ZRANB1Q9UGI0 708 aa18.61■□□□□ 0.57
IVD-212ENST00000560660 AMOTL2Q9Y2J4 779 aa18.61■□□□□ 0.57
IVD-212ENST00000560660 DAPK1P53355 1430 aa18.6■□□□□ 0.57
IVD-212ENST00000560660 MYO5BQ9ULV0 1848 aa18.6■□□□□ 0.57
IVD-212ENST00000560660 CROCC2H7BZ55 1655 aa18.6■□□□□ 0.57
IVD-212ENST00000560660 ANKRD30AQ9BXX3 1397 aa18.59■□□□□ 0.57
IVD-212ENST00000560660 ADAMTS13Q76LX8 1427 aa18.58■□□□□ 0.57
IVD-212ENST00000560660 SETD5Q9C0A6 1442 aa18.58■□□□□ 0.57
IVD-212ENST00000560660 DDX17Q92841 729 aaKnown RBP18.58■□□□□ 0.56
IVD-212ENST00000560660 NGLY1Q96IV0 654 aa18.58■□□□□ 0.56
IVD-212ENST00000560660 ADAMTS2O95450 1211 aa18.57■□□□□ 0.56
IVD-212ENST00000560660 FOXD1Q16676 465 aa18.57■□□□□ 0.56
IVD-212ENST00000560660 VPS8Q8N3P4 1428 aa18.57■□□□□ 0.56
IVD-212ENST00000560660 ATAD2Q6PL18 1390 aa18.55■□□□□ 0.56
IVD-212ENST00000560660 PIK3R4Q99570 1358 aa18.55■□□□□ 0.56
IVD-212ENST00000560660 GCC2Q8IWJ2 1684 aa18.55■□□□□ 0.56
IVD-212ENST00000560660 TMEM131LA2VDJ0 1609 aa18.55■□□□□ 0.56
IVD-212ENST00000560660 PTPN23Q9H3S7 1636 aa18.55■□□□□ 0.56
IVD-212ENST00000560660 ASXL1Q8IXJ9 1541 aa18.54■□□□□ 0.56
IVD-212ENST00000560660 RPRD2Q5VT52 1461 aaKnown RBP18.53■□□□□ 0.56
IVD-212ENST00000560660 PTPRUQ92729 1446 aa18.53■□□□□ 0.56
IVD-212ENST00000560660 PNPLA6Q8IY17 1366 aa18.53■□□□□ 0.56
IVD-212ENST00000560660 MST1RQ04912 1400 aa18.51■□□□□ 0.55
IVD-212ENST00000560660 USP21Q9UK80 565 aa18.51■□□□□ 0.55
IVD-212ENST00000560660 SETBP1Q9Y6X0 1596 aa18.51■□□□□ 0.55
IVD-212ENST00000560660 DCCP43146 1447 aa18.49■□□□□ 0.55
IVD-212ENST00000560660 NHSL1Q5SYE7 1610 aa18.49■□□□□ 0.55
IVD-212ENST00000560660 TRPC5Q9UL62 973 aaPredicted RBP18.48■□□□□ 0.55
IVD-212ENST00000560660 TRPM2O94759 1503 aa18.48■□□□□ 0.55
IVD-212ENST00000560660 CCDC125Q86Z20 511 aa18.45■□□□□ 0.54
IVD-212ENST00000560660 ANKRD50Q9ULJ7 1429 aa18.44■□□□□ 0.54
IVD-212ENST00000560660 LOC105371045A0A1W2PR82 267 aa18.43■□□□□ 0.54
IVD-212ENST00000560660 APLP2Q06481 763 aa18.43■□□□□ 0.54
IVD-212ENST00000560660 FNBP4Q8N3X1 1017 aaPredicted RBP18.43■□□□□ 0.54
IVD-212ENST00000560660 EP400Q96L91 3159 aa18.42■□□□□ 0.54
IVD-212ENST00000560660 UNC13BO14795 1591 aa18.4■□□□□ 0.54
IVD-212ENST00000560660 FAM50AQ14320 339 aaKnown RBP18.4■□□□□ 0.54
IVD-212ENST00000560660 METP08581 1390 aa18.4■□□□□ 0.54
IVD-212ENST00000560660 ADGRL2O95490 1459 aa18.39■□□□□ 0.54
IVD-212ENST00000560660 ORAI2Q96SN7 254 aa18.38■□□□□ 0.53
IVD-212ENST00000560660 ATRNO75882 1429 aa18.38■□□□□ 0.53
IVD-212ENST00000560660 ADGRL3Q9HAR2 1447 aa18.38■□□□□ 0.53
IVD-212ENST00000560660 XRN1Q8IZH2 1706 aaKnown RBP18.37■□□□□ 0.53
IVD-212ENST00000560660 SOS2Q07890 1332 aaPredicted RBP18.37■□□□□ 0.53
IVD-212ENST00000560660 ZNF326Q5BKZ1 582 aaKnown RBP18.36■□□□□ 0.53
IVD-212ENST00000560660 C1orf167Q5SNV9 1468 aa18.36■□□□□ 0.53
IVD-212ENST00000560660 E9PCH4 1651 aa18.35■□□□□ 0.53
IVD-212ENST00000560660 PTCH1Q13635 1447 aa18.35■□□□□ 0.53
IVD-212ENST00000560660 NRXN3Q9Y4C0 1643 aa18.34■□□□□ 0.53
IVD-212ENST00000560660 GJD4Q96KN9 370 aaPredicted RBP18.33■□□□□ 0.52
IVD-212ENST00000560660 DEFB132Q7Z7B7 95 aa18.32■□□□□ 0.52
IVD-212ENST00000560660 BCL9LQ86UU0 1499 aa18.32■□□□□ 0.52
IVD-212ENST00000560660 NALCNQ8IZF0 1738 aa18.31■□□□□ 0.52
IVD-212ENST00000560660 BLMP54132 1417 aaPredicted RBP18.29■□□□□ 0.52
IVD-212ENST00000560660 NUP155O75694 1391 aa18.28■□□□□ 0.52
IVD-212ENST00000560660 LAMC1P11047 1609 aa18.27■□□□□ 0.52
IVD-212ENST00000560660 SF3B2Q13435 895 aaKnown RBP18.27■□□□□ 0.52
IVD-212ENST00000560660 XPCQ01831 940 aaPredicted RBP18.24■□□□□ 0.51
IVD-212ENST00000560660 ESCO1Q5FWF5 840 aa18.24■□□□□ 0.51
IVD-212ENST00000560660 COL22A1Q8NFW1 1626 aaPredicted RBP18.23■□□□□ 0.51
IVD-212ENST00000560660 MYOM2P54296 1465 aa18.23■□□□□ 0.51
IVD-212ENST00000560660 ROBO2Q9HCK4 1378 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms