RNA–Protein interactions for RNA: ENST00000560658.5

TRPM1-211, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

TSL 2

Gene TRPM1, Length 1,649 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-211ENST00000560658 TCERG1O14776 1098 aaKnown RBP23.48■■□□□ 1.35
TRPM1-211ENST00000560658 ABCA9Q8IUA7 1624 aa23.48■■□□□ 1.35
TRPM1-211ENST00000560658 ANP32AP39687 249 aaKnown RBP23.48■■□□□ 1.35
TRPM1-211ENST00000560658 ATP7AQ04656 1500 aa23.46■■□□□ 1.35
TRPM1-211ENST00000560658 MS4A1P11836 297 aa23.45■■□□□ 1.34
TRPM1-211ENST00000560658 KNSTRNQ9Y448 316 aa23.45■■□□□ 1.34
TRPM1-211ENST00000560658 MYOM2P54296 1465 aa23.45■■□□□ 1.34
TRPM1-211ENST00000560658 PIK3C2GO75747 1445 aa23.44■■□□□ 1.34
TRPM1-211ENST00000560658 CLTCL1P53675 1640 aa23.44■■□□□ 1.34
TRPM1-211ENST00000560658 NOP58Q9Y2X3 529 aaKnown RBP23.44■■□□□ 1.34
TRPM1-211ENST00000560658 CC2D1BQ5T0F9 858 aaKnown RBP23.43■■□□□ 1.34
TRPM1-211ENST00000560658 ASXL1Q8IXJ9 1541 aa23.43■■□□□ 1.34
TRPM1-211ENST00000560658 FANCAO15360 1455 aa23.39■■□□□ 1.34
TRPM1-211ENST00000560658 NGEFQ8N5V2 710 aa23.39■■□□□ 1.33
TRPM1-211ENST00000560658 IPO9Q96P70 1041 aaKnown RBP23.37■■□□□ 1.33
TRPM1-211ENST00000560658 LMTK2Q8IWU2 1503 aa23.37■■□□□ 1.33
TRPM1-211ENST00000560658 EXOC6Q8TAG9 804 aa23.37■■□□□ 1.33
TRPM1-211ENST00000560658 KDM5AP29375 1690 aaKnown RBP23.36■■□□□ 1.33
TRPM1-211ENST00000560658 PPP2R1AP30153 589 aa23.36■■□□□ 1.33
TRPM1-211ENST00000560658 WDR43Q15061 677 aaKnown RBP eCLIP23.36■■□□□ 1.33
TRPM1-211ENST00000560658 AMER1Q5JTC6 1135 aaPredicted RBP23.36■■□□□ 1.33
TRPM1-211ENST00000560658 MAP3K4Q9Y6R4 1608 aa23.34■■□□□ 1.33
TRPM1-211ENST00000560658 AFAP1Q8N556 730 aa23.33■■□□□ 1.33
TRPM1-211ENST00000560658 SBNO2Q9Y2G9 1366 aa23.33■■□□□ 1.33
TRPM1-211ENST00000560658 ADGRL1O94910 1474 aa23.32■■□□□ 1.32
TRPM1-211ENST00000560658 EFCAB6Q5THR3 1501 aa23.31■■□□□ 1.32
TRPM1-211ENST00000560658 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.31■■□□□ 1.32
TRPM1-211ENST00000560658 MROH1Q8NDA8 1641 aa23.3■■□□□ 1.32
TRPM1-211ENST00000560658 MYOM1P52179 1685 aa23.3■■□□□ 1.32
TRPM1-211ENST00000560658 NRXN1Q9ULB1 1477 aa23.3■■□□□ 1.32
TRPM1-211ENST00000560658 MYO3AQ8NEV4 1616 aa23.3■■□□□ 1.32
TRPM1-211ENST00000560658 CDCA7LQ96GN5 454 aa23.29■■□□□ 1.32
TRPM1-211ENST00000560658 ADAMTS8Q9UP79 889 aa23.29■■□□□ 1.32
TRPM1-211ENST00000560658 ZBTB47Q9UFB7 747 aaPredicted RBP23.28■■□□□ 1.32
TRPM1-211ENST00000560658 ZNF521Q96K83 1311 aa23.28■■□□□ 1.32
TRPM1-211ENST00000560658 KIF1BO60333 1816 aa23.27■■□□□ 1.32
TRPM1-211ENST00000560658 SETBP1Q9Y6X0 1596 aa23.27■■□□□ 1.32
TRPM1-211ENST00000560658 IFT172Q9UG01 1749 aa23.27■■□□□ 1.32
TRPM1-211ENST00000560658 CFAP74Q9C0B2 1584 aa23.27■■□□□ 1.32
TRPM1-211ENST00000560658 GOLGA2Q08379 1002 aa23.26■■□□□ 1.31
TRPM1-211ENST00000560658 SALL2Q9Y467 1007 aaPredicted RBP23.26■■□□□ 1.31
TRPM1-211ENST00000560658 KIF3BO15066 747 aa23.25■■□□□ 1.31
TRPM1-211ENST00000560658 ABCA6Q8N139 1617 aa23.25■■□□□ 1.31
TRPM1-211ENST00000560658 ZNF518AQ6AHZ1 1483 aa23.24■■□□□ 1.31
TRPM1-211ENST00000560658 BACH2Q9BYV9 841 aa23.22■■□□□ 1.31
TRPM1-211ENST00000560658 ERVK-7P63135 1459 aa23.22■■□□□ 1.31
TRPM1-211ENST00000560658 PDE4AP27815 886 aa23.21■■□□□ 1.31
TRPM1-211ENST00000560658 DUSP27Q5VZP5 1158 aa23.21■■□□□ 1.31
TRPM1-211ENST00000560658 ADGRB3O60242 1522 aa23.2■■□□□ 1.3
TRPM1-211ENST00000560658 SENP3-EIF4A1A0A087X0R7 540 aa23.2■■□□□ 1.3
TRPM1-211ENST00000560658 ASXL2Q76L83 1435 aa23.19■■□□□ 1.3
TRPM1-211ENST00000560658 PLEKHH1Q9ULM0 1364 aa23.19■■□□□ 1.3
TRPM1-211ENST00000560658 CENPQQ7L2Z9 268 aaPredicted RBP23.19■■□□□ 1.3
TRPM1-211ENST00000560658 TRMT2AQ8IZ69 625 aaKnown RBP23.19■■□□□ 1.3
TRPM1-211ENST00000560658 CRBNQ96SW2 442 aa23.19■■□□□ 1.3
TRPM1-211ENST00000560658 KIDINS220Q9ULH0 1771 aa23.18■■□□□ 1.3
TRPM1-211ENST00000560658 RPGRIP1LQ68CZ1 1315 aa23.18■■□□□ 1.3
TRPM1-211ENST00000560658 SLFN5Q08AF3 891 aa23.17■■□□□ 1.3
TRPM1-211ENST00000560658 PPRC1Q5VV67 1664 aaKnown RBP23.17■■□□□ 1.3
TRPM1-211ENST00000560658 NINLQ9Y2I6 1382 aa23.16■■□□□ 1.3
TRPM1-211ENST00000560658 PUS7Q96PZ0 661 aaKnown RBP23.15■■□□□ 1.3
TRPM1-211ENST00000560658 POLR3AO14802 1390 aaPredicted RBP23.15■■□□□ 1.3
TRPM1-211ENST00000560658 MLH3Q9UHC1 1453 aa23.15■■□□□ 1.3
TRPM1-211ENST00000560658 DDRGK1Q96HY6 314 aa23.15■■□□□ 1.3
TRPM1-211ENST00000560658 E9PSI1 815 aa23.14■■□□□ 1.29
TRPM1-211ENST00000560658 NKTRP30414 1462 aaKnown RBP23.13■■□□□ 1.29
TRPM1-211ENST00000560658 KDM2BQ8NHM5 1336 aa23.13■■□□□ 1.29
TRPM1-211ENST00000560658 CFAP70Q5T0N1 1121 aa23.12■■□□□ 1.29
TRPM1-211ENST00000560658 PAK3O75914 559 aaPredicted RBP23.11■■□□□ 1.29
TRPM1-211ENST00000560658 ADGRF5Q8IZF2 1346 aa23.11■■□□□ 1.29
TRPM1-211ENST00000560658 NCBP3Q53F19 620 aaKnown RBP23.11■■□□□ 1.29
TRPM1-211ENST00000560658 USP32Q8NFA0 1604 aa23.1■■□□□ 1.29
TRPM1-211ENST00000560658 CENPJQ9HC77 1338 aaPredicted RBP23.1■■□□□ 1.29
TRPM1-211ENST00000560658 MROH2AA6NES4 1674 aa23.1■■□□□ 1.29
TRPM1-211ENST00000560658 PLIN1O60240 522 aa23.09■■□□□ 1.29
TRPM1-211ENST00000560658 RTL5Q5HYW3 569 aaPredicted RBP23.09■■□□□ 1.29
TRPM1-211ENST00000560658 POGZQ7Z3K3 1410 aa23.09■■□□□ 1.29
TRPM1-211ENST00000560658 BCL11AQ9H165 835 aa23.08■■□□□ 1.28
TRPM1-211ENST00000560658 UGGT1Q9NYU2 1555 aa23.08■■□□□ 1.28
TRPM1-211ENST00000560658 USP35Q9P2H5 1018 aa23.08■■□□□ 1.28
TRPM1-211ENST00000560658 NPM1P06748 294 aaKnown RBP eCLIP23.06■■□□□ 1.28
TRPM1-211ENST00000560658 AAMPQ13685 434 aa23.06■■□□□ 1.28
TRPM1-211ENST00000560658 C14orf93Q9H972 538 aaKnown RBP23.06■■□□□ 1.28
TRPM1-211ENST00000560658 PPLO60437 1756 aa23.06■■□□□ 1.28
TRPM1-211ENST00000560658 HECW2Q9P2P5 1572 aa23.06■■□□□ 1.28
TRPM1-211ENST00000560658 NOS1P29475 1434 aa23.05■■□□□ 1.28
TRPM1-211ENST00000560658 ZC3H13Q5T200 1668 aaKnown RBP23.05■■□□□ 1.28
TRPM1-211ENST00000560658 PPM1GO15355 546 aaPredicted RBP23.04■■□□□ 1.28
TRPM1-211ENST00000560658 NSD2O96028 1365 aa23.03■■□□□ 1.28
TRPM1-211ENST00000560658 NPATQ14207 1427 aa23.03■■□□□ 1.28
TRPM1-211ENST00000560658 ADGRB1O14514 1584 aa23.02■■□□□ 1.28
TRPM1-211ENST00000560658 DEKP35659 375 aaKnown RBP23.01■■□□□ 1.27
TRPM1-211ENST00000560658 PDE3AQ14432 1141 aa23.01■■□□□ 1.27
TRPM1-211ENST00000560658 CARD14Q9BXL6 1004 aa23.01■■□□□ 1.27
TRPM1-211ENST00000560658 NEO1Q92859 1461 aa23.01■■□□□ 1.27
TRPM1-211ENST00000560658 CD109Q6YHK3 1445 aa23.01■■□□□ 1.27
TRPM1-211ENST00000560658 APAF1O14727 1248 aa23■■□□□ 1.27
TRPM1-211ENST00000560658 FRMPD1Q5SYB0 1578 aa23■■□□□ 1.27
TRPM1-211ENST00000560658 CGNL1Q0VF96 1302 aa23■■□□□ 1.27
TRPM1-211ENST00000560658 QRICH2Q9H0J4 1663 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms