RNA–Protein interactions for RNA: ENST00000560532.1

SLTM-223, Transcript of SAFB like transcription modulator, human

TSL 4

Gene SLTM, Length 559 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLTM-223	ENST00000560532	EMID1	Q96A84	441 aa	Predicted RBP	11.51	□□□□□ -0.57
SLTM-223	ENST00000560532	PKDCC	Q504Y2	493 aa		11.49	□□□□□ -0.57
SLTM-223	ENST00000560532	PPEF1	O14829	653 aa	Predicted RBP	11.48	□□□□□ -0.57
SLTM-223	ENST00000560532	SPRYD7	Q5W111	196 aa		11.47	□□□□□ -0.57
SLTM-223	ENST00000560532	S1PR4	O95977	384 aa		11.46	□□□□□ -0.57
SLTM-223	ENST00000560532	DNAJB2	P25686	324 aa		11.46	□□□□□ -0.57
SLTM-223	ENST00000560532	MLLT3	P42568	568 aa	Predicted RBP	11.46	□□□□□ -0.57
SLTM-223	ENST00000560532	MYT1	Q01538	1121 aa		11.45	□□□□□ -0.58
SLTM-223	ENST00000560532	ZNF598	Q86UK7	904 aa	Known RBP	11.44	□□□□□ -0.58
SLTM-223	ENST00000560532	ZNF697	Q5TEC3	545 aa		11.43	□□□□□ -0.58
SLTM-223	ENST00000560532	ANKLE1	Q8NAG6	615 aa		11.43	□□□□□ -0.58
SLTM-223	ENST00000560532	FAM187A	A6NFU0	413 aa		11.42	□□□□□ -0.58
SLTM-223	ENST00000560532	DGAT1	O75907	488 aa		11.42	□□□□□ -0.58
SLTM-223	ENST00000560532	CFH	P08603	1231 aa		11.42	□□□□□ -0.58
SLTM-223	ENST00000560532	KMT5B	Q4FZB7	885 aa		11.42	□□□□□ -0.58
SLTM-223	ENST00000560532	LIAT1	Q6ZQX7	453 aa		11.42	□□□□□ -0.58
SLTM-223	ENST00000560532	RBM46	Q8TBY0	533 aa	Known RBP	11.42	□□□□□ -0.58
SLTM-223	ENST00000560532	TMEM134	Q9H6X4	195 aa		11.42	□□□□□ -0.58
SLTM-223	ENST00000560532	POTEC	B2RU33	542 aa		11.41	□□□□□ -0.58
SLTM-223	ENST00000560532	TNFRSF10A	O00220	468 aa		11.41	□□□□□ -0.58
SLTM-223	ENST00000560532	ACTN4	O43707	911 aa	Known RBP	11.41	□□□□□ -0.58
SLTM-223	ENST00000560532	PTGDR	Q13258	359 aa		11.41	□□□□□ -0.58
SLTM-223	ENST00000560532	FAM161A	Q3B820	660 aa		11.41	□□□□□ -0.58
SLTM-223	ENST00000560532	PRR20E	P86478	221 aa		11.4	□□□□□ -0.58
SLTM-223	ENST00000560532	PRR20C	P86479	221 aa		11.4	□□□□□ -0.58
SLTM-223	ENST00000560532	PRR20D	P86480	221 aa		11.4	□□□□□ -0.58
SLTM-223	ENST00000560532	PRR20B	P86481	221 aa		11.4	□□□□□ -0.58
SLTM-223	ENST00000560532	PRR20A	P86496	221 aa		11.4	□□□□□ -0.58
SLTM-223	ENST00000560532	ADGRG1	Q9Y653	693 aa		11.4	□□□□□ -0.58
SLTM-223	ENST00000560532	RCCD1	A6NED2	376 aa		11.39	□□□□□ -0.59
SLTM-223	ENST00000560532	ADH1B	P00325	375 aa		11.37	□□□□□ -0.59
SLTM-223	ENST00000560532	GDF9	O60383	454 aa		11.36	□□□□□ -0.59
SLTM-223	ENST00000560532	PLA2G2C	Q5R387	149 aa		11.35	□□□□□ -0.59
SLTM-223	ENST00000560532	NUTM2F	A1L443	756 aa		11.34	□□□□□ -0.59
SLTM-223	ENST00000560532	SLC10A3	P09131	477 aa		11.34	□□□□□ -0.59
SLTM-223	ENST00000560532	ST8SIA5	O15466	376 aa		11.33	□□□□□ -0.6
SLTM-223	ENST00000560532	NR1I2	O75469	434 aa		11.33	□□□□□ -0.6
SLTM-223	ENST00000560532	ARHGEF1	Q92888	912 aa	Known RBP	11.33	□□□□□ -0.6
SLTM-223	ENST00000560532	SLC6A16	Q9GZN6	736 aa		11.33	□□□□□ -0.6
SLTM-223	ENST00000560532	KCNV2	Q8TDN2	545 aa		11.32	□□□□□ -0.6
SLTM-223	ENST00000560532	FOXC1	Q12948	553 aa		11.29	□□□□□ -0.6
SLTM-223	ENST00000560532	PUS10	Q3MIT2	529 aa	Known RBP	11.29	□□□□□ -0.6
SLTM-223	ENST00000560532	AAAS	Q9NRG9	546 aa		11.29	□□□□□ -0.6
SLTM-223	ENST00000560532	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	11.28	□□□□□ -0.6
SLTM-223	ENST00000560532	SCUBE3	Q8IX30	993 aa		11.27	□□□□□ -0.61
SLTM-223	ENST00000560532	FCHSD2	O94868	740 aa		11.25	□□□□□ -0.61
SLTM-223	ENST00000560532	SPSB2	Q99619	263 aa		11.25	□□□□□ -0.61
SLTM-223	ENST00000560532	PKD2L1	Q9P0L9	805 aa		11.25	□□□□□ -0.61
SLTM-223	ENST00000560532	PXYLP1	Q8TE99	480 aa		11.23	□□□□□ -0.61
SLTM-223	ENST00000560532	TSHZ2	Q9NRE2	1034 aa		11.23	□□□□□ -0.61
SLTM-223	ENST00000560532	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.22	□□□□□ -0.61
SLTM-223	ENST00000560532	TREML4	Q6UXN2	200 aa		11.21	□□□□□ -0.61
SLTM-223	ENST00000560532	DACH1	Q9UI36	760 aa		11.2	□□□□□ -0.62
SLTM-223	ENST00000560532	OAT	P04181	439 aa		11.19	□□□□□ -0.62
SLTM-223	ENST00000560532	FCF1	Q9Y324	198 aa	Known RBP	11.19	□□□□□ -0.62
SLTM-223	ENST00000560532	RSPH4A	Q5TD94	716 aa		11.18	□□□□□ -0.62
SLTM-223	ENST00000560532	LMOD2	Q6P5Q4	547 aa		11.18	□□□□□ -0.62
SLTM-223	ENST00000560532	RTN4	Q9NQC3	1192 aa	Known RBP	11.18	□□□□□ -0.62
SLTM-223	ENST00000560532	LCE2A	Q5TA79	106 aa	Predicted RBP	11.17	□□□□□ -0.62
SLTM-223	ENST00000560532	METTL3	Q86U44	580 aa	Known RBP	11.17	□□□□□ -0.62
SLTM-223	ENST00000560532	RDH13	Q8NBN7	331 aa		11.17	□□□□□ -0.62
SLTM-223	ENST00000560532	SEMA3E	O15041	775 aa		11.16	□□□□□ -0.62
SLTM-223	ENST00000560532	RPIA	P49247	311 aa		11.15	□□□□□ -0.62
SLTM-223	ENST00000560532	CYP4X1	Q8N118	509 aa		11.15	□□□□□ -0.62
SLTM-223	ENST00000560532	TOR4A	Q9NXH8	423 aa		11.15	□□□□□ -0.62
SLTM-223	ENST00000560532	GMPR2	Q9P2T1	348 aa	Known RBP	11.15	□□□□□ -0.62
SLTM-223	ENST00000560532	MORN1	Q5T089	497 aa		11.14	□□□□□ -0.63
SLTM-223	ENST00000560532	CRIPAK	Q8N1N5	446 aa		11.14	□□□□□ -0.63
SLTM-223	ENST00000560532	AXIN1	O15169	862 aa		11.13	□□□□□ -0.63
SLTM-223	ENST00000560532	FUT2	Q10981	343 aa		11.13	□□□□□ -0.63
SLTM-223	ENST00000560532	PRDM9	Q9NQV7	894 aa		11.13	□□□□□ -0.63
SLTM-223	ENST00000560532	CD2BP2	O95400	341 aa	Known RBP	11.12	□□□□□ -0.63
SLTM-223	ENST00000560532	AVP	P01185	164 aa		11.12	□□□□□ -0.63
SLTM-223	ENST00000560532	HIC1	Q14526	733 aa		11.12	□□□□□ -0.63
SLTM-223	ENST00000560532	NLRP7	Q8WX94	980 aa		11.12	□□□□□ -0.63
SLTM-223	ENST00000560532	THAP11	Q96EK4	314 aa		11.12	□□□□□ -0.63
SLTM-223	ENST00000560532	DDX11L8	A8MPP1	907 aa		11.11	□□□□□ -0.63
SLTM-223	ENST00000560532	C11orf95	C9JLR9	678 aa	Predicted RBP	11.11	□□□□□ -0.63
SLTM-223	ENST00000560532	WFS1	O76024	890 aa		11.1	□□□□□ -0.63
SLTM-223	ENST00000560532	FMNL1	O95466	1100 aa	Predicted RBP	11.1	□□□□□ -0.63
SLTM-223	ENST00000560532	FAM160A2	Q8N612	972 aa	Predicted RBP	11.1	□□□□□ -0.63
SLTM-223	ENST00000560532	SLC27A5	Q9Y2P5	690 aa		11.1	□□□□□ -0.63
SLTM-223	ENST00000560532	FECH	P22830	423 aa		11.09	□□□□□ -0.63
SLTM-223	ENST00000560532	DAXX	Q9UER7	740 aa	Predicted RBP	11.09	□□□□□ -0.63
SLTM-223	ENST00000560532	TTC24	A2A3L6	582 aa	Predicted RBP	11.08	□□□□□ -0.64
SLTM-223	ENST00000560532	ATP6V1A	P38606	617 aa		11.08	□□□□□ -0.64
SLTM-223	ENST00000560532	P3H3	Q8IVL6	736 aa		11.08	□□□□□ -0.64
SLTM-223	ENST00000560532	CTC1	Q2NKJ3	1217 aa		11.07	□□□□□ -0.64
SLTM-223	ENST00000560532	RBM26	Q5T8P6	1007 aa	Known RBP	11.07	□□□□□ -0.64
SLTM-223	ENST00000560532	ZBTB24	O43167	697 aa	Predicted RBP	11.05	□□□□□ -0.64
SLTM-223	ENST00000560532	GNPAT	O15228	680 aa		11.04	□□□□□ -0.64
SLTM-223	ENST00000560532	GCGR	P47871	477 aa		11.03	□□□□□ -0.64
SLTM-223	ENST00000560532	SMCP	P49901	116 aa	Predicted RBP	11.03	□□□□□ -0.64
SLTM-223	ENST00000560532	RNF19B	Q6ZMZ0	732 aa		11.03	□□□□□ -0.64
SLTM-223	ENST00000560532	NFX1	Q12986	1120 aa	Known RBP	11.02	□□□□□ -0.65
SLTM-223	ENST00000560532	BRICD5	Q6PL45	260 aa		11.02	□□□□□ -0.65
SLTM-223	ENST00000560532	GPR37	O15354	613 aa		10.99	□□□□□ -0.65
SLTM-223	ENST00000560532	SMPD1	P17405	629 aa		10.99	□□□□□ -0.65
SLTM-223	ENST00000560532	MSS51	Q4VC12	460 aa		10.99	□□□□□ -0.65
SLTM-223	ENST00000560532	SULF1	Q8IWU6	871 aa		10.99	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 22 ms