RNA–Protein interactions for RNA: ENST00000560508.1

AP4E1-203, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best) BASIC

Gene AP4E1, Length 6,653 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-203ENST00000560508 FAM161AQ3B820 660 aa8.65□□□□□ -1.03
AP4E1-203ENST00000560508 DIAPH1O60610 1272 aaKnown RBP8.64□□□□□ -1.03
AP4E1-203ENST00000560508 HTATSF1O43719 755 aaKnown RBP8.64□□□□□ -1.03
AP4E1-203ENST00000560508 SYAP1Q96A49 352 aaPredicted RBP8.64□□□□□ -1.03
AP4E1-203ENST00000560508 GNL2Q13823 731 aaKnown RBP8.64□□□□□ -1.03
AP4E1-203ENST00000560508 EXOC6Q8TAG9 804 aa8.64□□□□□ -1.03
AP4E1-203ENST00000560508 CSPP1Q1MSJ5 1256 aa8.63□□□□□ -1.03
AP4E1-203ENST00000560508 CYB5RLQ6IPT4 315 aa8.63□□□□□ -1.03
AP4E1-203ENST00000560508 CHAF1AQ13111 956 aaPredicted RBP8.63□□□□□ -1.03
AP4E1-203ENST00000560508 PLIN1O60240 522 aa8.63□□□□□ -1.03
AP4E1-203ENST00000560508 C1orf141Q5JVX7 400 aa8.63□□□□□ -1.03
AP4E1-203ENST00000560508 CCDC141Q6ZP82 1450 aa8.63□□□□□ -1.03
AP4E1-203ENST00000560508 RAPGEF6Q8TEU7 1601 aa8.63□□□□□ -1.03
AP4E1-203ENST00000560508 LTV1Q96GA3 475 aaPredicted RBP8.62□□□□□ -1.03
AP4E1-203ENST00000560508 GRIN2AQ12879 1464 aa8.62□□□□□ -1.03
AP4E1-203ENST00000560508 FAM69CQ0P6D2 419 aa8.62□□□□□ -1.03
AP4E1-203ENST00000560508 DRC7Q8IY82 874 aa8.62□□□□□ -1.03
AP4E1-203ENST00000560508 SLKQ9H2G2 1235 aaPredicted RBP8.62□□□□□ -1.03
AP4E1-203ENST00000560508 APAF1O14727 1248 aa8.62□□□□□ -1.03
AP4E1-203ENST00000560508 TAF7LQ5H9L4 462 aa8.62□□□□□ -1.03
AP4E1-203ENST00000560508 CHMP3Q9Y3E7 222 aa8.61□□□□□ -1.03
AP4E1-203ENST00000560508 ST18O60284 1047 aa8.61□□□□□ -1.03
AP4E1-203ENST00000560508 DDX19BQ9UMR2 479 aa8.61□□□□□ -1.03
AP4E1-203ENST00000560508 URB2Q14146 1524 aaKnown RBP8.61□□□□□ -1.03
AP4E1-203ENST00000560508 ERBINQ96RT1 1412 aa8.61□□□□□ -1.03
AP4E1-203ENST00000560508 NUTM2FA1L443 756 aa8.61□□□□□ -1.03
AP4E1-203ENST00000560508 GORABQ5T7V8 394 aa8.61□□□□□ -1.03
AP4E1-203ENST00000560508 RTN4Q9NQC3 1192 aaKnown RBP8.61□□□□□ -1.03
AP4E1-203ENST00000560508 FAM135AQ9P2D6 1515 aa8.61□□□□□ -1.03
AP4E1-203ENST00000560508 PDE4AP27815 886 aa8.61□□□□□ -1.03
AP4E1-203ENST00000560508 HSP90B1P14625 803 aaKnown RBP8.6□□□□□ -1.03
AP4E1-203ENST00000560508 ARHGEF11O15085 1522 aa8.6□□□□□ -1.03
AP4E1-203ENST00000560508 RIPK4P57078 832 aa8.6□□□□□ -1.03
AP4E1-203ENST00000560508 NAIPQ13075 1403 aa8.6□□□□□ -1.03
AP4E1-203ENST00000560508 AAMPQ13685 434 aa8.6□□□□□ -1.03
AP4E1-203ENST00000560508 ZNF330Q9Y3S2 320 aaPredicted RBP8.6□□□□□ -1.03
AP4E1-203ENST00000560508 ANKRD45Q5TZF3 282 aa8.6□□□□□ -1.03
AP4E1-203ENST00000560508 PBRM1Q86U86 1689 aa8.59□□□□□ -1.03
AP4E1-203ENST00000560508 GOLGA6L3A6NEY3 463 aa8.59□□□□□ -1.03
AP4E1-203ENST00000560508 DDX11L8A8MPP1 907 aa8.59□□□□□ -1.03
AP4E1-203ENST00000560508 BCL2L13Q9BXK5 485 aa8.59□□□□□ -1.03
AP4E1-203ENST00000560508 KIF16BQ96L93 1317 aa8.58□□□□□ -1.04
AP4E1-203ENST00000560508 DZIP1LQ8IYY4 767 aaKnown RBP8.58□□□□□ -1.04
AP4E1-203ENST00000560508 COG6Q9Y2V7 657 aa8.58□□□□□ -1.04
AP4E1-203ENST00000560508 FANCIQ9NVI1 1328 aa8.58□□□□□ -1.04
AP4E1-203ENST00000560508 PHF14O94880 888 aa8.58□□□□□ -1.04
AP4E1-203ENST00000560508 API5Q9BZZ5 524 aaKnown RBP8.58□□□□□ -1.04
AP4E1-203ENST00000560508 TPM4P67936 248 aa8.58□□□□□ -1.04
AP4E1-203ENST00000560508 USP35Q9P2H5 1018 aa8.58□□□□□ -1.04
AP4E1-203ENST00000560508 GZF1Q9H116 711 aaPredicted RBP8.57□□□□□ -1.04
AP4E1-203ENST00000560508 CABP2Q9NPB3 220 aa8.57□□□□□ -1.04
AP4E1-203ENST00000560508 GNAI1P63096 354 aa8.57□□□□□ -1.04
AP4E1-203ENST00000560508 AKNAQ7Z591 1439 aa8.56□□□□□ -1.04
AP4E1-203ENST00000560508 AFAP1Q8N556 730 aa8.56□□□□□ -1.04
AP4E1-203ENST00000560508 TULP1O00294 542 aaPredicted RBP8.56□□□□□ -1.04
AP4E1-203ENST00000560508 ABCC5O15440 1437 aa8.56□□□□□ -1.04
AP4E1-203ENST00000560508 PPP2R1AP30153 589 aa8.56□□□□□ -1.04
AP4E1-203ENST00000560508 TEFQ10587 303 aa8.56□□□□□ -1.04
AP4E1-203ENST00000560508 TMX4Q9H1E5 349 aaPredicted RBP8.56□□□□□ -1.04
AP4E1-203ENST00000560508 CCDC9Q9Y3X0 531 aaKnown RBP8.56□□□□□ -1.04
AP4E1-203ENST00000560508 PSME1Q06323 249 aa8.56□□□□□ -1.04
AP4E1-203ENST00000560508 RILPL2Q969X0 211 aa8.56□□□□□ -1.04
AP4E1-203ENST00000560508 KIAA2012Q0VF49 1180 aa8.55□□□□□ -1.04
AP4E1-203ENST00000560508 FOXD4L1Q9NU39 408 aa8.55□□□□□ -1.04
AP4E1-203ENST00000560508 UGGT2Q9NYU1 1516 aa8.55□□□□□ -1.04
AP4E1-203ENST00000560508 ELL2O00472 640 aaPredicted RBP8.55□□□□□ -1.04
AP4E1-203ENST00000560508 RPGRIP1LQ68CZ1 1315 aa8.55□□□□□ -1.04
AP4E1-203ENST00000560508 NINLQ9Y2I6 1382 aa8.54□□□□□ -1.04
AP4E1-203ENST00000560508 PLB1Q6P1J6 1458 aa8.54□□□□□ -1.04
AP4E1-203ENST00000560508 EVA1CP58658 441 aa8.54□□□□□ -1.04
AP4E1-203ENST00000560508 SMG6Q86US8 1419 aaKnown RBP8.54□□□□□ -1.04
AP4E1-203ENST00000560508 TTC5Q8N0Z6 440 aa8.54□□□□□ -1.04
AP4E1-203ENST00000560508 CHMP4CQ96CF2 233 aa8.54□□□□□ -1.04
AP4E1-203ENST00000560508 KIF3AQ9Y496 699 aa8.54□□□□□ -1.04
AP4E1-203ENST00000560508 SKOR2Q2VWA4 1001 aaPredicted RBP8.54□□□□□ -1.04
AP4E1-203ENST00000560508 NBPF8Q3BBV2 869 aa8.54□□□□□ -1.04
AP4E1-203ENST00000560508 TMEM132EQ6IEE7 984 aa8.54□□□□□ -1.04
AP4E1-203ENST00000560508 NEXNQ0ZGT2 675 aa8.53□□□□□ -1.04
AP4E1-203ENST00000560508 ADAMTS8Q9UP79 889 aa8.53□□□□□ -1.04
AP4E1-203ENST00000560508 DDX58O95786 925 aaKnown RBP8.53□□□□□ -1.04
AP4E1-203ENST00000560508 CFAP70Q5T0N1 1121 aa8.53□□□□□ -1.04
AP4E1-203ENST00000560508 RUFY2Q8WXA3 655 aa8.53□□□□□ -1.04
AP4E1-203ENST00000560508 ISY1Q9ULR0 285 aaKnown RBP8.53□□□□□ -1.04
AP4E1-203ENST00000560508 NOL8Q76FK4 1167 aaKnown RBP8.53□□□□□ -1.04
AP4E1-203ENST00000560508 TSPYL4Q9UJ04 414 aa8.53□□□□□ -1.04
AP4E1-203ENST00000560508 LRRFIP1Q32MZ4 808 aaKnown RBP8.53□□□□□ -1.04
AP4E1-203ENST00000560508 ADAMTS12P58397 1594 aa8.53□□□□□ -1.04
AP4E1-203ENST00000560508 ANKRD30BQ9BXX2 1392 aa8.52□□□□□ -1.04
AP4E1-203ENST00000560508 REC8O95072 547 aa8.52□□□□□ -1.05
AP4E1-203ENST00000560508 CCDC34Q96HJ3 373 aa8.52□□□□□ -1.05
AP4E1-203ENST00000560508 GGNBP2Q9H3C7 697 aa8.52□□□□□ -1.05
AP4E1-203ENST00000560508 HMOX1P09601 288 aa8.52□□□□□ -1.05
AP4E1-203ENST00000560508 NBPF1Q3BBV0 1214 aa8.52□□□□□ -1.05
AP4E1-203ENST00000560508 C9orf78Q9NZ63 289 aaPredicted RBP8.52□□□□□ -1.05
AP4E1-203ENST00000560508 EIF2S2P20042 333 aaKnown RBP8.51□□□□□ -1.05
AP4E1-203ENST00000560508 MTHFSP49914 203 aa8.51□□□□□ -1.05
AP4E1-203ENST00000560508 DIAPH3Q9NSV4 1193 aa8.51□□□□□ -1.05
AP4E1-203ENST00000560508 INTS3Q68E01 1043 aaKnown RBP8.51□□□□□ -1.05
AP4E1-203ENST00000560508 KIAA0556O60303 1618 aa8.51□□□□□ -1.05
AP4E1-203ENST00000560508 EIF2AK4Q9P2K8 1649 aaKnown RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms