RNA–Protein interactions for RNA: ENST00000560475.1

TRIP4-209, Transcript of thyroid hormone receptor interactor 4, humanhuman

TSL 3

Gene TRIP4, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIP4-209ENST00000560475 COPS2P61201 443 aa11.13□□□□□ -0.63
TRIP4-209ENST00000560475 GNPATO15228 680 aa11.11□□□□□ -0.63
TRIP4-209ENST00000560475 OATP04181 439 aa11.11□□□□□ -0.63
TRIP4-209ENST00000560475 PXYLP1Q8TE99 480 aa11.11□□□□□ -0.63
TRIP4-209ENST00000560475 NKX2-3Q8TAU0 364 aa11.1□□□□□ -0.63
TRIP4-209ENST00000560475 GPR37O15354 613 aa11.09□□□□□ -0.63
TRIP4-209ENST00000560475 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.08□□□□□ -0.64
TRIP4-209ENST00000560475 IRX2Q9BZI1 471 aaPredicted RBP11.08□□□□□ -0.64
TRIP4-209ENST00000560475 PPP1R18Q6NYC8 613 aa11.07□□□□□ -0.64
TRIP4-209ENST00000560475 METTL3Q86U44 580 aaKnown RBP11.07□□□□□ -0.64
TRIP4-209ENST00000560475 PCDHB3Q9Y5E6 796 aa11.07□□□□□ -0.64
TRIP4-209ENST00000560475 SLC10A3P09131 477 aa11.06□□□□□ -0.64
TRIP4-209ENST00000560475 PRR14Q9BWN1 585 aa11.06□□□□□ -0.64
TRIP4-209ENST00000560475 GPIHBP1Q8IV16 184 aa11.05□□□□□ -0.64
TRIP4-209ENST00000560475 ZPR1O75312 459 aa11.04□□□□□ -0.64
TRIP4-209ENST00000560475 CFHP08603 1231 aa11.04□□□□□ -0.64
TRIP4-209ENST00000560475 BLOC1S3Q6QNY0 202 aa11.04□□□□□ -0.64
TRIP4-209ENST00000560475 NLRP7Q8WX94 980 aa11.03□□□□□ -0.64
TRIP4-209ENST00000560475 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.03□□□□□ -0.64
TRIP4-209ENST00000560475 ACTN4O43707 911 aaKnown RBP11.02□□□□□ -0.65
TRIP4-209ENST00000560475 KMT5BQ4FZB7 885 aa11.02□□□□□ -0.65
TRIP4-209ENST00000560475 PRKD2Q9BZL6 878 aa11□□□□□ -0.65
TRIP4-209ENST00000560475 PHOX2BQ99453 314 aa10.99□□□□□ -0.65
TRIP4-209ENST00000560475 TLL1O43897 1013 aa10.97□□□□□ -0.65
TRIP4-209ENST00000560475 RSPH4AQ5TD94 716 aa10.97□□□□□ -0.65
TRIP4-209ENST00000560475 DAXXQ9UER7 740 aaPredicted RBP10.97□□□□□ -0.65
TRIP4-209ENST00000560475 TULP1O00294 542 aaPredicted RBP10.96□□□□□ -0.65
TRIP4-209ENST00000560475 GGCXP38435 758 aa10.96□□□□□ -0.65
TRIP4-209ENST00000560475 DDX11L8A8MPP1 907 aa10.95□□□□□ -0.66
TRIP4-209ENST00000560475 RDH13Q8NBN7 331 aa10.95□□□□□ -0.66
TRIP4-209ENST00000560475 PUS10Q3MIT2 529 aaKnown RBP10.94□□□□□ -0.66
TRIP4-209ENST00000560475 TMUB1Q9BVT8 246 aa10.93□□□□□ -0.66
TRIP4-209ENST00000560475 NR1I2O75469 434 aa10.91□□□□□ -0.66
TRIP4-209ENST00000560475 SCUBE3Q8IX30 993 aa10.91□□□□□ -0.66
TRIP4-209ENST00000560475 V9GY48 417 aaPredicted RBP10.91□□□□□ -0.66
TRIP4-209ENST00000560475 RNF223E7ERA6 249 aa10.9□□□□□ -0.66
TRIP4-209ENST00000560475 PPEF1O14829 653 aaPredicted RBP10.89□□□□□ -0.67
TRIP4-209ENST00000560475 GFRA3O60609 400 aa10.89□□□□□ -0.67
TRIP4-209ENST00000560475 S1PR4O95977 384 aa10.89□□□□□ -0.67
TRIP4-209ENST00000560475 MAP2K5Q13163 448 aa10.89□□□□□ -0.67
TRIP4-209ENST00000560475 IRF6O14896 467 aa10.88□□□□□ -0.67
TRIP4-209ENST00000560475 Q6ZNB5 142 aa10.88□□□□□ -0.67
TRIP4-209ENST00000560475 ADH1BP00325 375 aa10.87□□□□□ -0.67
TRIP4-209ENST00000560475 FUT2Q10981 343 aa10.87□□□□□ -0.67
TRIP4-209ENST00000560475 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.87□□□□□ -0.67
TRIP4-209ENST00000560475 SULF1Q8IWU6 871 aa10.87□□□□□ -0.67
TRIP4-209ENST00000560475 GCGRP47871 477 aa10.86□□□□□ -0.67
TRIP4-209ENST00000560475 ATP6V1AP38606 617 aa10.84□□□□□ -0.67
TRIP4-209ENST00000560475 MORN1Q5T089 497 aa10.84□□□□□ -0.67
TRIP4-209ENST00000560475 EMID1Q96A84 441 aaPredicted RBP10.84□□□□□ -0.67
TRIP4-209ENST00000560475 MINK1Q8N4C8 1332 aaPredicted RBP10.84□□□□□ -0.67
TRIP4-209ENST00000560475 SLC19A1P41440 591 aa10.83□□□□□ -0.68
TRIP4-209ENST00000560475 LAPTM4AQ15012 233 aa10.83□□□□□ -0.68
TRIP4-209ENST00000560475 SPSB2Q99619 263 aa10.83□□□□□ -0.68
TRIP4-209ENST00000560475 SLC6A16Q9GZN6 736 aa10.83□□□□□ -0.68
TRIP4-209ENST00000560475 MDM2Q00987 491 aaPredicted RBP10.82□□□□□ -0.68
TRIP4-209ENST00000560475 ANKLE1Q8NAG6 615 aa10.82□□□□□ -0.68
TRIP4-209ENST00000560475 CCDC102AQ96A19 550 aa10.81□□□□□ -0.68
TRIP4-209ENST00000560475 SLC27A5Q9Y2P5 690 aa10.81□□□□□ -0.68
TRIP4-209ENST00000560475 LMOD2Q6P5Q4 547 aa10.8□□□□□ -0.68
TRIP4-209ENST00000560475 PDZRN3Q9UPQ7 1066 aa10.8□□□□□ -0.68
TRIP4-209ENST00000560475 LIAT1Q6ZQX7 453 aa10.79□□□□□ -0.68
TRIP4-209ENST00000560475 NRG2O14511 850 aaPredicted RBP10.78□□□□□ -0.68
TRIP4-209ENST00000560475 CD46P15529 392 aa10.78□□□□□ -0.68
TRIP4-209ENST00000560475 THAP11Q96EK4 314 aa10.78□□□□□ -0.68
TRIP4-209ENST00000560475 PLA2G2CQ5R387 149 aa10.77□□□□□ -0.69
TRIP4-209ENST00000560475 SPRYD7Q5W111 196 aa10.77□□□□□ -0.69
TRIP4-209ENST00000560475 FMNL1O95466 1100 aaPredicted RBP10.76□□□□□ -0.69
TRIP4-209ENST00000560475 LCE2BO14633 110 aa10.75□□□□□ -0.69
TRIP4-209ENST00000560475 GRIPAP1Q4V328 841 aa10.75□□□□□ -0.69
TRIP4-209ENST00000560475 FAM160A2Q8N612 972 aaPredicted RBP10.75□□□□□ -0.69
TRIP4-209ENST00000560475 KRI1Q8N9T8 703 aaKnown RBP10.75□□□□□ -0.69
TRIP4-209ENST00000560475 SLC24A1O60721 1099 aa10.74□□□□□ -0.69
TRIP4-209ENST00000560475 BRICD5Q6PL45 260 aa10.74□□□□□ -0.69
TRIP4-209ENST00000560475 TRAF7Q6Q0C0 670 aa10.74□□□□□ -0.69
TRIP4-209ENST00000560475 KDM4AO75164 1064 aa10.73□□□□□ -0.69
TRIP4-209ENST00000560475 RNF19BQ6ZMZ0 732 aa10.73□□□□□ -0.69
TRIP4-209ENST00000560475 TRIM67Q6ZTA4 783 aa10.73□□□□□ -0.69
TRIP4-209ENST00000560475 ZNF598Q86UK7 904 aaKnown RBP10.73□□□□□ -0.69
TRIP4-209ENST00000560475 GPCPD1Q9NPB8 672 aa10.72□□□□□ -0.69
TRIP4-209ENST00000560475 SALL2Q9Y467 1007 aaPredicted RBP10.72□□□□□ -0.69
TRIP4-209ENST00000560475 CLCN1P35523 988 aa10.71□□□□□ -0.69
TRIP4-209ENST00000560475 ZNF697Q5TEC3 545 aa10.71□□□□□ -0.69
TRIP4-209ENST00000560475 PRDM9Q9NQV7 894 aa10.71□□□□□ -0.69
TRIP4-209ENST00000560475 BARGINQ6ZT62 677 aa10.7□□□□□ -0.7
TRIP4-209ENST00000560475 HLA-CQ95604 372 aa10.7□□□□□ -0.7
TRIP4-209ENST00000560475 FCF1Q9Y324 198 aaKnown RBP10.7□□□□□ -0.7
TRIP4-209ENST00000560475 ZMYND10O75800 440 aa10.69□□□□□ -0.7
TRIP4-209ENST00000560475 ZC3H15Q8WU90 426 aaKnown RBP10.69□□□□□ -0.7
TRIP4-209ENST00000560475 REPIN1Q9BWE0 567 aaKnown RBP10.69□□□□□ -0.7
TRIP4-209ENST00000560475 FAM217BQ9NTX9 383 aaPredicted RBP10.69□□□□□ -0.7
TRIP4-209ENST00000560475 Q3C1V9 767 aa10.67□□□□□ -0.7
TRIP4-209ENST00000560475 TNFRSF10AO00220 468 aa10.66□□□□□ -0.7
TRIP4-209ENST00000560475 GDF9O60383 454 aa10.65□□□□□ -0.7
TRIP4-209ENST00000560475 USP46P62068 366 aa10.65□□□□□ -0.7
TRIP4-209ENST00000560475 GUCA2AQ02747 115 aa10.65□□□□□ -0.7
TRIP4-209ENST00000560475 MSS51Q4VC12 460 aa10.65□□□□□ -0.7
TRIP4-209ENST00000560475 HOXA2O43364 376 aa10.64□□□□□ -0.71
TRIP4-209ENST00000560475 SSTR3P32745 418 aaPredicted RBP10.63□□□□□ -0.71
TRIP4-209ENST00000560475 RPIAP49247 311 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms