RNA–Protein interactions for RNA: ENST00000560350.5

USP3-AS1-206, USP3 antisense RNA 1, humanhuman

TSL 2

Gene USP3-AS1, Length 407 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-206ENST00000560350 ANO8Q9HCE9 1232 aaPredicted RBP12.12□□□□□ -0.47
USP3-AS1-206ENST00000560350 ATP1B4Q9UN42 357 aaPredicted RBP12.12□□□□□ -0.47
USP3-AS1-206ENST00000560350 PHLDB1Q86UU1 1377 aa12.11□□□□□ -0.47
USP3-AS1-206ENST00000560350 TK2O00142 265 aa12.11□□□□□ -0.47
USP3-AS1-206ENST00000560350 BBXQ8WY36 941 aaPredicted RBP12.11□□□□□ -0.47
USP3-AS1-206ENST00000560350 CD109Q6YHK3 1445 aa12.11□□□□□ -0.47
USP3-AS1-206ENST00000560350 TEX14Q8IWB6 1497 aa12.1□□□□□ -0.47
USP3-AS1-206ENST00000560350 AMER1Q5JTC6 1135 aaPredicted RBP12.1□□□□□ -0.47
USP3-AS1-206ENST00000560350 ZNF454Q8N9F8 522 aa12.1□□□□□ -0.47
USP3-AS1-206ENST00000560350 EMILIN3Q9NT22 766 aa12.1□□□□□ -0.47
USP3-AS1-206ENST00000560350 ARHGAP35Q9NRY4 1499 aa12.09□□□□□ -0.47
USP3-AS1-206ENST00000560350 HRO43593 1189 aa12.09□□□□□ -0.47
USP3-AS1-206ENST00000560350 EVI5O60447 810 aa12.09□□□□□ -0.47
USP3-AS1-206ENST00000560350 FOSBP53539 338 aa12.09□□□□□ -0.47
USP3-AS1-206ENST00000560350 KCNK17Q96T54 332 aa12.08□□□□□ -0.48
USP3-AS1-206ENST00000560350 NUP153P49790 1475 aaKnown RBP12.08□□□□□ -0.48
USP3-AS1-206ENST00000560350 BCL2L12Q9HB09 334 aa12.07□□□□□ -0.48
USP3-AS1-206ENST00000560350 CLIP1P30622 1438 aa12.06□□□□□ -0.48
USP3-AS1-206ENST00000560350 ZCCHC11Q5TAX3 1644 aaKnown RBP12.06□□□□□ -0.48
USP3-AS1-206ENST00000560350 MAGI3Q5TCQ9 1506 aa12.06□□□□□ -0.48
USP3-AS1-206ENST00000560350 RAPGEF6Q8TEU7 1601 aa12.05□□□□□ -0.48
USP3-AS1-206ENST00000560350 RTN4Q9NQC3 1192 aaKnown RBP12.05□□□□□ -0.48
USP3-AS1-206ENST00000560350 MAP3K9P80192 1104 aa12.04□□□□□ -0.48
USP3-AS1-206ENST00000560350 CAMK2BQ13554 666 aa12.02□□□□□ -0.49
USP3-AS1-206ENST00000560350 KIF13AQ9H1H9 1805 aa12.02□□□□□ -0.49
USP3-AS1-206ENST00000560350 CASKIN1Q8WXD9 1431 aa12.02□□□□□ -0.49
USP3-AS1-206ENST00000560350 LOC105371045A0A1W2PR82 267 aa12□□□□□ -0.49
USP3-AS1-206ENST00000560350 VPS9D1Q9Y2B5 631 aa12□□□□□ -0.49
USP3-AS1-206ENST00000560350 EFCAB2Q5VUJ9 269 aa11.99□□□□□ -0.49
USP3-AS1-206ENST00000560350 ZDHHC16Q969W1 377 aa11.99□□□□□ -0.49
USP3-AS1-206ENST00000560350 SLC4A5Q9BY07 1137 aa11.99□□□□□ -0.49
USP3-AS1-206ENST00000560350 ADAM33Q9BZ11 813 aa11.99□□□□□ -0.49
USP3-AS1-206ENST00000560350 PTPREP23469 700 aa11.98□□□□□ -0.49
USP3-AS1-206ENST00000560350 NEO1Q92859 1461 aa11.97□□□□□ -0.49
USP3-AS1-206ENST00000560350 SPRYD3Q8NCJ5 442 aa11.97□□□□□ -0.49
USP3-AS1-206ENST00000560350 KDM6BO15054 1643 aa11.97□□□□□ -0.49
USP3-AS1-206ENST00000560350 MAP3K4Q9Y6R4 1608 aa11.97□□□□□ -0.49
USP3-AS1-206ENST00000560350 COL17A1Q9UMD9 1497 aaPredicted RBP11.96□□□□□ -0.49
USP3-AS1-206ENST00000560350 TROQ12816 1431 aaPredicted RBP11.96□□□□□ -0.49
USP3-AS1-206ENST00000560350 ARAP3Q8WWN8 1544 aa11.96□□□□□ -0.5
USP3-AS1-206ENST00000560350 CCDC18Q5T9S5 1454 aa11.95□□□□□ -0.5
USP3-AS1-206ENST00000560350 ZBED2Q9BTP6 218 aa11.95□□□□□ -0.5
USP3-AS1-206ENST00000560350 HCSTQ9UBK5 93 aa11.95□□□□□ -0.5
USP3-AS1-206ENST00000560350 PCDHGA10Q9Y5H3 936 aa11.95□□□□□ -0.5
USP3-AS1-206ENST00000560350 PLCH2O75038 1416 aa11.94□□□□□ -0.5
USP3-AS1-206ENST00000560350 CEP162Q5TB80 1403 aa11.94□□□□□ -0.5
USP3-AS1-206ENST00000560350 HECW1Q76N89 1606 aa11.94□□□□□ -0.5
USP3-AS1-206ENST00000560350 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.94□□□□□ -0.5
USP3-AS1-206ENST00000560350 CFAP43Q8NDM7 1665 aa11.94□□□□□ -0.5
USP3-AS1-206ENST00000560350 ABCA9Q8IUA7 1624 aa11.93□□□□□ -0.5
USP3-AS1-206ENST00000560350 FYCO1Q9BQS8 1478 aa11.92□□□□□ -0.5
USP3-AS1-206ENST00000560350 RAPGEF3O95398 923 aa11.92□□□□□ -0.5
USP3-AS1-206ENST00000560350 AKNAQ7Z591 1439 aa11.92□□□□□ -0.5
USP3-AS1-206ENST00000560350 CDK13Q14004 1512 aaKnown RBP11.91□□□□□ -0.5
USP3-AS1-206ENST00000560350 BHMG1C9JSJ3 638 aaPredicted RBP11.91□□□□□ -0.5
USP3-AS1-206ENST00000560350 DPYSL4O14531 572 aa11.91□□□□□ -0.5
USP3-AS1-206ENST00000560350 PHF14O94880 888 aa11.91□□□□□ -0.5
USP3-AS1-206ENST00000560350 KCTD12Q96CX2 325 aaKnown RBP11.9□□□□□ -0.5
USP3-AS1-206ENST00000560350 STAC3Q96MF2 364 aa11.9□□□□□ -0.5
USP3-AS1-206ENST00000560350 FANCAO15360 1455 aa11.89□□□□□ -0.51
USP3-AS1-206ENST00000560350 DENND4BO75064 1496 aaPredicted RBP11.89□□□□□ -0.51
USP3-AS1-206ENST00000560350 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.89□□□□□ -0.51
USP3-AS1-206ENST00000560350 TSPOAP1O95153 1857 aa11.89□□□□□ -0.51
USP3-AS1-206ENST00000560350 PPRC1Q5VV67 1664 aaKnown RBP11.88□□□□□ -0.51
USP3-AS1-206ENST00000560350 TYW1BQ6NUM6 668 aa11.88□□□□□ -0.51
USP3-AS1-206ENST00000560350 MTUS2Q5JR59 1369 aa11.88□□□□□ -0.51
USP3-AS1-206ENST00000560350 PPP1R3GB7ZBB8 358 aa11.87□□□□□ -0.51
USP3-AS1-206ENST00000560350 FBXW7Q969H0 707 aa11.87□□□□□ -0.51
USP3-AS1-206ENST00000560350 SCAPERQ9BY12 1400 aa11.86□□□□□ -0.51
USP3-AS1-206ENST00000560350 PAXIP1Q6ZW49 1069 aaPredicted RBP11.86□□□□□ -0.51
USP3-AS1-206ENST00000560350 COL9A1P20849 921 aa11.85□□□□□ -0.51
USP3-AS1-206ENST00000560350 CFDP1Q9UEE9 299 aaPredicted RBP11.85□□□□□ -0.51
USP3-AS1-206ENST00000560350 MAGI2Q86UL8 1455 aa11.84□□□□□ -0.51
USP3-AS1-206ENST00000560350 CFAP44Q96MT7 982 aa11.84□□□□□ -0.51
USP3-AS1-206ENST00000560350 VPS8Q8N3P4 1428 aa11.84□□□□□ -0.51
USP3-AS1-206ENST00000560350 CCNB3Q8WWL7 1395 aa11.83□□□□□ -0.52
USP3-AS1-206ENST00000560350 RSPH4AQ5TD94 716 aa11.83□□□□□ -0.52
USP3-AS1-206ENST00000560350 EPAS1Q99814 870 aa11.83□□□□□ -0.52
USP3-AS1-206ENST00000560350 PLA2G2EQ9NZK7 142 aa11.83□□□□□ -0.52
USP3-AS1-206ENST00000560350 ADGRL1O94910 1474 aa11.83□□□□□ -0.52
USP3-AS1-206ENST00000560350 PCF11O94913 1555 aaKnown RBP11.82□□□□□ -0.52
USP3-AS1-206ENST00000560350 ARID4BQ4LE39 1312 aaPredicted RBP11.82□□□□□ -0.52
USP3-AS1-206ENST00000560350 PROX2Q3B8N5 592 aa11.81□□□□□ -0.52
USP3-AS1-206ENST00000560350 AFAP1Q8N556 730 aa11.81□□□□□ -0.52
USP3-AS1-206ENST00000560350 MRPL50Q8N5N7 158 aaKnown RBP11.81□□□□□ -0.52
USP3-AS1-206ENST00000560350 ZNF777Q9ULD5 760 aaPredicted RBP11.81□□□□□ -0.52
USP3-AS1-206ENST00000560350 KIF14Q15058 1648 aa11.81□□□□□ -0.52
USP3-AS1-206ENST00000560350 PDIA6Q15084 440 aa11.8□□□□□ -0.52
USP3-AS1-206ENST00000560350 NBPF3Q9H094 633 aa11.8□□□□□ -0.52
USP3-AS1-206ENST00000560350 CFAP74Q9C0B2 1584 aa11.79□□□□□ -0.52
USP3-AS1-206ENST00000560350 KIAA1107Q9UPP5 1409 aa11.79□□□□□ -0.52
USP3-AS1-206ENST00000560350 THSD4Q6ZMP0 1018 aa11.79□□□□□ -0.52
USP3-AS1-206ENST00000560350 RABGEF1Q9UJ41 708 aa11.79□□□□□ -0.52
USP3-AS1-206ENST00000560350 ARHGAP5Q13017 1502 aa11.79□□□□□ -0.52
USP3-AS1-206ENST00000560350 GPATCH8Q9UKJ3 1502 aaKnown RBP11.79□□□□□ -0.52
USP3-AS1-206ENST00000560350 POGZQ7Z3K3 1410 aa11.78□□□□□ -0.52
USP3-AS1-206ENST00000560350 C6orf132Q5T0Z8 1188 aa11.78□□□□□ -0.52
USP3-AS1-206ENST00000560350 DDX12PQ92771 950 aa11.78□□□□□ -0.52
USP3-AS1-206ENST00000560350 TTC37Q6PGP7 1564 aa11.78□□□□□ -0.52
USP3-AS1-206ENST00000560350 ZNF518AQ6AHZ1 1483 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms