RNA–Protein interactions for RNA: ENST00000560349.1

CARMIL3-203, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 1 (best)

Gene CARMIL3, Length 2,664 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-203ENST00000560349 CC2D1BQ5T0F9 858 aaKnown RBP19.24■□□□□ 0.67
CARMIL3-203ENST00000560349 KIF1BO60333 1816 aa19.24■□□□□ 0.67
CARMIL3-203ENST00000560349 LAMC1P11047 1609 aa19.23■□□□□ 0.67
CARMIL3-203ENST00000560349 PANK3Q9H999 370 aa19.23■□□□□ 0.67
CARMIL3-203ENST00000560349 SIGLEC1Q9BZZ2 1709 aa19.22■□□□□ 0.67
CARMIL3-203ENST00000560349 FKBP8Q14318 412 aa19.21■□□□□ 0.67
CARMIL3-203ENST00000560349 CAMSAP1Q5T5Y3 1602 aa19.21■□□□□ 0.67
CARMIL3-203ENST00000560349 FBXO31Q5XUX0 539 aaPredicted RBP19.2■□□□□ 0.66
CARMIL3-203ENST00000560349 TMEM132EQ6IEE7 984 aa19.2■□□□□ 0.66
CARMIL3-203ENST00000560349 SCAF11Q99590 1463 aaKnown RBP19.2■□□□□ 0.66
CARMIL3-203ENST00000560349 TMC1Q8TDI8 760 aa19.19■□□□□ 0.66
CARMIL3-203ENST00000560349 ADGRB3O60242 1522 aa19.18■□□□□ 0.66
CARMIL3-203ENST00000560349 IQGAP1P46940 1657 aa19.18■□□□□ 0.66
CARMIL3-203ENST00000560349 PER1O15534 1290 aaPredicted RBP19.18■□□□□ 0.66
CARMIL3-203ENST00000560349 IDI1Q13907 227 aa19.18■□□□□ 0.66
CARMIL3-203ENST00000560349 TRAK1Q9UPV9 953 aa19.17■□□□□ 0.66
CARMIL3-203ENST00000560349 SYNMO15061 1565 aa19.16■□□□□ 0.66
CARMIL3-203ENST00000560349 MYOM2P54296 1465 aa19.15■□□□□ 0.66
CARMIL3-203ENST00000560349 IRX6P78412 446 aaPredicted RBP19.15■□□□□ 0.66
CARMIL3-203ENST00000560349 STAC3Q96MF2 364 aa19.14■□□□□ 0.65
CARMIL3-203ENST00000560349 TSHZ2Q9NRE2 1034 aa19.14■□□□□ 0.65
CARMIL3-203ENST00000560349 IFT172Q9UG01 1749 aa19.13■□□□□ 0.65
CARMIL3-203ENST00000560349 KTN1Q86UP2 1357 aaKnown RBP19.13■□□□□ 0.65
CARMIL3-203ENST00000560349 MYBBP1AQ9BQG0 1328 aaKnown RBP19.13■□□□□ 0.65
CARMIL3-203ENST00000560349 PNISRQ8TF01 805 aaKnown RBP19.11■□□□□ 0.65
CARMIL3-203ENST00000560349 ZMYM4Q5VZL5 1548 aa19.11■□□□□ 0.65
CARMIL3-203ENST00000560349 EIF3AQ14152 1382 aaKnown RBP19.11■□□□□ 0.65
CARMIL3-203ENST00000560349 RALBP1Q15311 655 aa19.1■□□□□ 0.65
CARMIL3-203ENST00000560349 NEURL4Q96JN8 1562 aa19.1■□□□□ 0.65
CARMIL3-203ENST00000560349 KIF13AQ9H1H9 1805 aa19.09■□□□□ 0.65
CARMIL3-203ENST00000560349 SAFB2Q14151 953 aaKnown RBP eCLIP19.09■□□□□ 0.65
CARMIL3-203ENST00000560349 SALL2Q9Y467 1007 aaPredicted RBP19.09■□□□□ 0.65
CARMIL3-203ENST00000560349 PIK3C2GO75747 1445 aa19.09■□□□□ 0.65
CARMIL3-203ENST00000560349 PARD3Q8TEW0 1356 aa19.08■□□□□ 0.65
CARMIL3-203ENST00000560349 NRXN1Q9ULB1 1477 aa19.08■□□□□ 0.65
CARMIL3-203ENST00000560349 PPLO60437 1756 aa19.08■□□□□ 0.65
CARMIL3-203ENST00000560349 NEFLP07196 543 aa19.08■□□□□ 0.64
CARMIL3-203ENST00000560349 ZBED9Q6R2W3 1325 aa19.07■□□□□ 0.64
CARMIL3-203ENST00000560349 C14orf93Q9H972 538 aaKnown RBP19.07■□□□□ 0.64
CARMIL3-203ENST00000560349 STK26Q9P289 416 aa19.06■□□□□ 0.64
CARMIL3-203ENST00000560349 KIAA1210Q9ULL0 1709 aa19.06■□□□□ 0.64
CARMIL3-203ENST00000560349 KNSTRNQ9Y448 316 aa19.05■□□□□ 0.64
CARMIL3-203ENST00000560349 ARHGAP31Q2M1Z3 1444 aa19.05■□□□□ 0.64
CARMIL3-203ENST00000560349 PIK3C2BO00750 1634 aa19.05■□□□□ 0.64
CARMIL3-203ENST00000560349 NLRP13Q86W25 1043 aa19.05■□□□□ 0.64
CARMIL3-203ENST00000560349 CENPJQ9HC77 1338 aaPredicted RBP19.04■□□□□ 0.64
CARMIL3-203ENST00000560349 ERVK-7P63135 1459 aa19.04■□□□□ 0.64
CARMIL3-203ENST00000560349 STAG3Q9UJ98 1225 aa19.04■□□□□ 0.64
CARMIL3-203ENST00000560349 BRD4O60885 1362 aaPredicted RBP19.04■□□□□ 0.64
CARMIL3-203ENST00000560349 MYO5BQ9ULV0 1848 aa19.03■□□□□ 0.64
CARMIL3-203ENST00000560349 ZC3H13Q5T200 1668 aaKnown RBP19.03■□□□□ 0.64
CARMIL3-203ENST00000560349 PREX1Q8TCU6 1659 aa19.03■□□□□ 0.64
CARMIL3-203ENST00000560349 NEXMIFQ5QGS0 1516 aa19.03■□□□□ 0.64
CARMIL3-203ENST00000560349 VGFO15240 615 aaPredicted RBP19.02■□□□□ 0.64
CARMIL3-203ENST00000560349 CDCA8Q53HL2 280 aa19.02■□□□□ 0.64
CARMIL3-203ENST00000560349 SLC52A1Q9NWF4 448 aa19.02■□□□□ 0.64
CARMIL3-203ENST00000560349 RPGRIP1LQ68CZ1 1315 aa19.01■□□□□ 0.63
CARMIL3-203ENST00000560349 ADGRB1O14514 1584 aa19.01■□□□□ 0.63
CARMIL3-203ENST00000560349 CLTCQ00610 1675 aaKnown RBP19■□□□□ 0.63
CARMIL3-203ENST00000560349 AMER1Q5JTC6 1135 aaPredicted RBP19■□□□□ 0.63
CARMIL3-203ENST00000560349 MYOM1P52179 1685 aa19■□□□□ 0.63
CARMIL3-203ENST00000560349 PLPPR3Q6T4P5 718 aa18.99■□□□□ 0.63
CARMIL3-203ENST00000560349 KDM5AP29375 1690 aaKnown RBP18.98■□□□□ 0.63
CARMIL3-203ENST00000560349 CARD14Q9BXL6 1004 aa18.97■□□□□ 0.63
CARMIL3-203ENST00000560349 SLC12A5Q9H2X9 1139 aa18.97■□□□□ 0.63
CARMIL3-203ENST00000560349 LRPPRCP42704 1394 aaKnown RBP18.97■□□□□ 0.63
CARMIL3-203ENST00000560349 ESF1Q9H501 851 aaKnown RBP18.96■□□□□ 0.63
CARMIL3-203ENST00000560349 TMEM131LA2VDJ0 1609 aa18.95■□□□□ 0.62
CARMIL3-203ENST00000560349 SETBP1Q9Y6X0 1596 aa18.95■□□□□ 0.62
CARMIL3-203ENST00000560349 ARHGEF40Q8TER5 1519 aa18.95■□□□□ 0.62
CARMIL3-203ENST00000560349 PPP2R1AP30153 589 aa18.94■□□□□ 0.62
CARMIL3-203ENST00000560349 QRICH2Q9H0J4 1663 aa18.93■□□□□ 0.62
CARMIL3-203ENST00000560349 AGLP35573 1532 aa18.93■□□□□ 0.62
CARMIL3-203ENST00000560349 CABP2Q9NPB3 220 aa18.93■□□□□ 0.62
CARMIL3-203ENST00000560349 TNNT2P45379 298 aaPredicted RBP18.92■□□□□ 0.62
CARMIL3-203ENST00000560349 TRHP20396 242 aaPredicted RBP18.92■□□□□ 0.62
CARMIL3-203ENST00000560349 ASXL1Q8IXJ9 1541 aa18.91■□□□□ 0.62
CARMIL3-203ENST00000560349 MYO3AQ8NEV4 1616 aa18.9■□□□□ 0.62
CARMIL3-203ENST00000560349 REREQ9P2R6 1566 aa18.9■□□□□ 0.62
CARMIL3-203ENST00000560349 MINK1Q8N4C8 1332 aaPredicted RBP18.9■□□□□ 0.62
CARMIL3-203ENST00000560349 SBNO2Q9Y2G9 1366 aa18.89■□□□□ 0.61
CARMIL3-203ENST00000560349 ZMYM3Q14202 1370 aa18.89■□□□□ 0.61
CARMIL3-203ENST00000560349 PRAM1Q96QH2 718 aa18.88■□□□□ 0.61
CARMIL3-203ENST00000560349 ADAMTS8Q9UP79 889 aa18.88■□□□□ 0.61
CARMIL3-203ENST00000560349 CEBPAP49715 358 aaPredicted RBP18.87■□□□□ 0.61
CARMIL3-203ENST00000560349 NUDCQ9Y266 331 aa18.87■□□□□ 0.61
CARMIL3-203ENST00000560349 NSD3Q9BZ95 1437 aa18.87■□□□□ 0.61
CARMIL3-203ENST00000560349 ARHGEF28Q8N1W1 1705 aaKnown RBP18.87■□□□□ 0.61
CARMIL3-203ENST00000560349 SRPK2P78362 688 aaKnown RBP18.86■□□□□ 0.61
CARMIL3-203ENST00000560349 A2ML1A8K2U0 1454 aa18.85■□□□□ 0.61
CARMIL3-203ENST00000560349 CDCA7LQ96GN5 454 aa18.85■□□□□ 0.61
CARMIL3-203ENST00000560349 POGKQ9P215 609 aa18.85■□□□□ 0.61
CARMIL3-203ENST00000560349 TULP4Q9NRJ4 1543 aa18.85■□□□□ 0.61
CARMIL3-203ENST00000560349 PPP6R1Q9UPN7 881 aa18.84■□□□□ 0.61
CARMIL3-203ENST00000560349 SMG6Q86US8 1419 aaKnown RBP18.84■□□□□ 0.61
CARMIL3-203ENST00000560349 EVC2Q86UK5 1308 aa18.84■□□□□ 0.61
CARMIL3-203ENST00000560349 ZFYVE9O95405 1425 aa18.83■□□□□ 0.61
CARMIL3-203ENST00000560349 SLC24A1O60721 1099 aa18.83■□□□□ 0.61
CARMIL3-203ENST00000560349 SPATA31D1Q6ZQQ2 1576 aa18.83■□□□□ 0.6
CARMIL3-203ENST00000560349 RIMS2Q9UQ26 1411 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms