RNA–Protein interactions for RNA: ENST00000560328.1

NEO1-208, Transcript of neogenin 1, human

TSL 1 (best)

Gene NEO1, Length 5,895 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEO1-208	ENST00000560328	TULP1	O00294	542 aa	Predicted RBP	11.66	□□□□□ -0.54
NEO1-208	ENST00000560328	IPO9	Q96P70	1041 aa	Known RBP	11.66	□□□□□ -0.54
NEO1-208	ENST00000560328	EVA1C	P58658	441 aa		11.66	□□□□□ -0.54
NEO1-208	ENST00000560328	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	11.65	□□□□□ -0.54
NEO1-208	ENST00000560328	RAPGEF3	O95398	923 aa		11.65	□□□□□ -0.54
NEO1-208	ENST00000560328	ANKRD45	Q5TZF3	282 aa		11.65	□□□□□ -0.54
NEO1-208	ENST00000560328	GBP4	Q96PP9	640 aa		11.65	□□□□□ -0.54
NEO1-208	ENST00000560328	HMOX1	P09601	288 aa		11.65	□□□□□ -0.54
NEO1-208	ENST00000560328	GLIPR1L2	Q4G1C9	344 aa		11.64	□□□□□ -0.55
NEO1-208	ENST00000560328	ADAMTS8	Q9UP79	889 aa		11.64	□□□□□ -0.55
NEO1-208	ENST00000560328	BRD4	O60885	1362 aa	Predicted RBP	11.64	□□□□□ -0.55
NEO1-208	ENST00000560328	EIF2S2	P20042	333 aa	Known RBP	11.64	□□□□□ -0.55
NEO1-208	ENST00000560328	PEG3	Q9GZU2	1588 aa		11.64	□□□□□ -0.55
NEO1-208	ENST00000560328	PCF11	O94913	1555 aa	Known RBP	11.63	□□□□□ -0.55
NEO1-208	ENST00000560328	MTHFS	P49914	203 aa		11.63	□□□□□ -0.55
NEO1-208	ENST00000560328	GNL2	Q13823	731 aa	Known RBP	11.63	□□□□□ -0.55
NEO1-208	ENST00000560328	CUL7	Q14999	1698 aa		11.63	□□□□□ -0.55
NEO1-208	ENST00000560328	TXNDC2	Q86VQ3	553 aa		11.63	□□□□□ -0.55
NEO1-208	ENST00000560328	PRAM1	Q96QH2	718 aa		11.63	□□□□□ -0.55
NEO1-208	ENST00000560328	DZIP1L	Q8IYY4	767 aa	Known RBP	11.62	□□□□□ -0.55
NEO1-208	ENST00000560328	PDE4A	P27815	886 aa		11.62	□□□□□ -0.55
NEO1-208	ENST00000560328	ISY1	Q9ULR0	285 aa	Known RBP	11.62	□□□□□ -0.55
NEO1-208	ENST00000560328	DDX19B	Q9UMR2	479 aa		11.62	□□□□□ -0.55
NEO1-208	ENST00000560328	NAIP	Q13075	1403 aa		11.62	□□□□□ -0.55
NEO1-208	ENST00000560328	GOLGA6L6	A8MZA4	724 aa		11.62	□□□□□ -0.55
NEO1-208	ENST00000560328	L1TD1	Q5T7N2	865 aa	Known RBP	11.62	□□□□□ -0.55
NEO1-208	ENST00000560328	NECTIN2	Q92692	538 aa		11.62	□□□□□ -0.55
NEO1-208	ENST00000560328	PPP2R1A	P30153	589 aa		11.62	□□□□□ -0.55
NEO1-208	ENST00000560328	NUTM2G	Q5VZR2	741 aa		11.62	□□□□□ -0.55
NEO1-208	ENST00000560328	TTC5	Q8N0Z6	440 aa		11.62	□□□□□ -0.55
NEO1-208	ENST00000560328	FAM161A	Q3B820	660 aa		11.61	□□□□□ -0.55
NEO1-208	ENST00000560328	RTN4	Q9NQC3	1192 aa	Known RBP	11.61	□□□□□ -0.55
NEO1-208	ENST00000560328	ARHGEF11	O15085	1522 aa		11.61	□□□□□ -0.55
NEO1-208	ENST00000560328	DEK	P35659	375 aa	Known RBP	11.61	□□□□□ -0.55
NEO1-208	ENST00000560328	PLB1	Q6P1J6	1458 aa		11.61	□□□□□ -0.55
NEO1-208	ENST00000560328	ROCK1	Q13464	1354 aa		11.61	□□□□□ -0.55
NEO1-208	ENST00000560328	URB2	Q14146	1524 aa	Known RBP	11.61	□□□□□ -0.55
NEO1-208	ENST00000560328	MAGI1	Q96QZ7	1491 aa	Predicted RBP	11.6	□□□□□ -0.55
NEO1-208	ENST00000560328	GNAI1	P63096	354 aa		11.6	□□□□□ -0.55
NEO1-208	ENST00000560328	API5	Q9BZZ5	524 aa	Known RBP	11.6	□□□□□ -0.55
NEO1-208	ENST00000560328	SLC52A1	Q9NWF4	448 aa		11.6	□□□□□ -0.55
NEO1-208	ENST00000560328	ATF3	P18847	181 aa		11.6	□□□□□ -0.55
NEO1-208	ENST00000560328	GZF1	Q9H116	711 aa	Predicted RBP	11.6	□□□□□ -0.55
NEO1-208	ENST00000560328	GRIN2A	Q12879	1464 aa		11.6	□□□□□ -0.55
NEO1-208	ENST00000560328	NLRP6	P59044	892 aa		11.6	□□□□□ -0.55
NEO1-208	ENST00000560328	NOL8	Q76FK4	1167 aa	Known RBP	11.6	□□□□□ -0.55
NEO1-208	ENST00000560328	GTF2E1	P29083	439 aa	Predicted RBP	11.6	□□□□□ -0.55
NEO1-208	ENST00000560328	FOXD4L1	Q9NU39	408 aa		11.6	□□□□□ -0.55
NEO1-208	ENST00000560328	PTMS	P20962	102 aa		11.6	□□□□□ -0.55
NEO1-208	ENST00000560328	RILPL2	Q969X0	211 aa		11.6	□□□□□ -0.55
NEO1-208	ENST00000560328	SLC12A5	Q9H2X9	1139 aa		11.6	□□□□□ -0.55
NEO1-208	ENST00000560328	TMX4	Q9H1E5	349 aa	Predicted RBP	11.59	□□□□□ -0.55
NEO1-208	ENST00000560328	NEXN	Q0ZGT2	675 aa		11.58	□□□□□ -0.55
NEO1-208	ENST00000560328	TSPYL4	Q9UJ04	414 aa		11.58	□□□□□ -0.55
NEO1-208	ENST00000560328	HSP90B1	P14625	803 aa	Known RBP	11.58	□□□□□ -0.56
NEO1-208	ENST00000560328	TCP11L2	Q8N4U5	519 aa		11.58	□□□□□ -0.56
NEO1-208	ENST00000560328	C9orf78	Q9NZ63	289 aa	Predicted RBP	11.58	□□□□□ -0.56
NEO1-208	ENST00000560328	NRDC	O43847	1150 aa		11.58	□□□□□ -0.56
NEO1-208	ENST00000560328	FKBP5	Q13451	457 aa	Predicted RBP	11.57	□□□□□ -0.56
NEO1-208	ENST00000560328	ST18	O60284	1047 aa		11.57	□□□□□ -0.56
NEO1-208	ENST00000560328	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.57	□□□□□ -0.56
NEO1-208	ENST00000560328	ERBIN	Q96RT1	1412 aa		11.57	□□□□□ -0.56
NEO1-208	ENST00000560328	CDCA7L	Q96GN5	454 aa		11.57	□□□□□ -0.56
NEO1-208	ENST00000560328	CDK19	Q9BWU1	502 aa		11.57	□□□□□ -0.56
NEO1-208	ENST00000560328	KIF16B	Q96L93	1317 aa		11.57	□□□□□ -0.56
NEO1-208	ENST00000560328	CCDC141	Q6ZP82	1450 aa		11.57	□□□□□ -0.56
NEO1-208	ENST00000560328	CAMSAP2	Q08AD1	1489 aa		11.56	□□□□□ -0.56
NEO1-208	ENST00000560328	RAPGEF4	Q8WZA2	1011 aa		11.56	□□□□□ -0.56
NEO1-208	ENST00000560328	CABP1	Q9NZU7	370 aa		11.56	□□□□□ -0.56
NEO1-208	ENST00000560328	ABCC5	O15440	1437 aa		11.56	□□□□□ -0.56
NEO1-208	ENST00000560328	DRC7	Q8IY82	874 aa		11.55	□□□□□ -0.56
NEO1-208	ENST00000560328	THEMIS	Q8N1K5	641 aa	Predicted RBP	11.55	□□□□□ -0.56
NEO1-208	ENST00000560328	ABTB2	Q8N961	1025 aa		11.55	□□□□□ -0.56
NEO1-208	ENST00000560328	HTATSF1	O43719	755 aa	Known RBP	11.55	□□□□□ -0.56
NEO1-208	ENST00000560328	WDR97	A6NE52	1622 aa		11.55	□□□□□ -0.56
NEO1-208	ENST00000560328	ZNF608	Q9ULD9	1512 aa	Predicted RBP	11.55	□□□□□ -0.56
NEO1-208	ENST00000560328	RPGRIP1L	Q68CZ1	1315 aa		11.55	□□□□□ -0.56
NEO1-208	ENST00000560328	FRAT2	O75474	233 aa	Predicted RBP	11.55	□□□□□ -0.56
NEO1-208	ENST00000560328	PANK1	Q8TE04	598 aa		11.55	□□□□□ -0.56
NEO1-208	ENST00000560328	UNC13A	Q9UPW8	1703 aa		11.55	□□□□□ -0.56
NEO1-208	ENST00000560328	ESCO1	Q5FWF5	840 aa		11.55	□□□□□ -0.56
NEO1-208	ENST00000560328	NLRP2	Q9NX02	1062 aa		11.55	□□□□□ -0.56
NEO1-208	ENST00000560328	PTPN23	Q9H3S7	1636 aa		11.54	□□□□□ -0.56
NEO1-208	ENST00000560328	MAP3K1	Q13233	1512 aa		11.54	□□□□□ -0.56
NEO1-208	ENST00000560328	DDX58	O95786	925 aa	Known RBP	11.54	□□□□□ -0.56
NEO1-208	ENST00000560328	BIVM-ERCC5	R4GMW8	1640 aa		11.54	□□□□□ -0.56
NEO1-208	ENST00000560328	ANKRD30B	Q9BXX2	1392 aa		11.54	□□□□□ -0.56
NEO1-208	ENST00000560328	PRKAR2B	P31323	418 aa		11.54	□□□□□ -0.56
NEO1-208	ENST00000560328	SYTL4	Q96C24	671 aa	Predicted RBP	11.54	□□□□□ -0.56
NEO1-208	ENST00000560328	SLC4A3	P48751	1232 aa		11.53	□□□□□ -0.56
NEO1-208	ENST00000560328	GPRASP1	Q5JY77	1395 aa		11.53	□□□□□ -0.56
NEO1-208	ENST00000560328	MSN	P26038	577 aa	Known RBP	11.53	□□□□□ -0.56
NEO1-208	ENST00000560328	SYAP1	Q96A49	352 aa	Predicted RBP	11.53	□□□□□ -0.56
NEO1-208	ENST00000560328	TOMM22	Q9NS69	142 aa		11.52	□□□□□ -0.56
NEO1-208	ENST00000560328		G3V3G9	751 aa		11.52	□□□□□ -0.57
NEO1-208	ENST00000560328	DCAF8	Q5TAQ9	597 aa		11.52	□□□□□ -0.57
NEO1-208	ENST00000560328	PROSER2	Q86WR7	435 aa	Predicted RBP	11.52	□□□□□ -0.57
NEO1-208	ENST00000560328	CD109	Q6YHK3	1445 aa		11.52	□□□□□ -0.57
NEO1-208	ENST00000560328	PNISR	Q8TF01	805 aa	Known RBP	11.52	□□□□□ -0.57
NEO1-208	ENST00000560328	KIF14	Q15058	1648 aa		11.51	□□□□□ -0.57

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