RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, human

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TM2D3-209	ENST00000560013	RPGRIP1L	Q68CZ1	1315 aa		32.83	■■■□□ 2.85
TM2D3-209	ENST00000560013	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.82	■■■□□ 2.85
TM2D3-209	ENST00000560013	KIF7	Q2M1P5	1343 aa		32.82	■■■□□ 2.84
TM2D3-209	ENST00000560013	ESF1	Q9H501	851 aa	Known RBP	32.81	■■■□□ 2.84
TM2D3-209	ENST00000560013	ADGRF5	Q8IZF2	1346 aa		32.8	■■■□□ 2.84
TM2D3-209	ENST00000560013	NRXN1	Q9ULB1	1477 aa		32.79	■■■□□ 2.84
TM2D3-209	ENST00000560013	SPATA31D1	Q6ZQQ2	1576 aa		32.76	■■■□□ 2.84
TM2D3-209	ENST00000560013	TMEM131L	A2VDJ0	1609 aa		32.74	■■■□□ 2.83
TM2D3-209	ENST00000560013	MYO5B	Q9ULV0	1848 aa		32.74	■■■□□ 2.83
TM2D3-209	ENST00000560013	ZMYM3	Q14202	1370 aa		32.73	■■■□□ 2.83
TM2D3-209	ENST00000560013	IQGAP1	P46940	1657 aa		32.73	■■■□□ 2.83
TM2D3-209	ENST00000560013	NEXMIF	Q5QGS0	1516 aa		32.71	■■■□□ 2.83
TM2D3-209	ENST00000560013	ANP32C	O43423	234 aa		32.69	■■■□□ 2.82
TM2D3-209	ENST00000560013	CFAP70	Q5T0N1	1121 aa		32.69	■■■□□ 2.82
TM2D3-209	ENST00000560013	PIK3C2G	O75747	1445 aa		32.67	■■■□□ 2.82
TM2D3-209	ENST00000560013	SCAF11	Q99590	1463 aa	Known RBP	32.67	■■■□□ 2.82
TM2D3-209	ENST00000560013	VGF	O15240	615 aa	Predicted RBP	32.67	■■■□□ 2.82
TM2D3-209	ENST00000560013	TESK2	Q96S53	571 aa		32.62	■■■□□ 2.81
TM2D3-209	ENST00000560013	SETBP1	Q9Y6X0	1596 aa		32.62	■■■□□ 2.81
TM2D3-209	ENST00000560013	POLR3GL	Q9BT43	218 aa		32.61	■■■□□ 2.81
TM2D3-209	ENST00000560013	ZFYVE9	O95405	1425 aa		32.61	■■■□□ 2.81
TM2D3-209	ENST00000560013	C14orf93	Q9H972	538 aa	Known RBP	32.61	■■■□□ 2.81
TM2D3-209	ENST00000560013	STAG3	Q9UJ98	1225 aa		32.6	■■■□□ 2.81
TM2D3-209	ENST00000560013	EIF3A	Q14152	1382 aa	Known RBP	32.57	■■■□□ 2.81
TM2D3-209	ENST00000560013	NUTM2D	Q5VT03	806 aa	Predicted RBP	32.57	■■■□□ 2.8
TM2D3-209	ENST00000560013	A2ML1	A8K2U0	1454 aa		32.53	■■■□□ 2.8
TM2D3-209	ENST00000560013	TMF1	P82094	1093 aa		32.53	■■■□□ 2.8
TM2D3-209	ENST00000560013	FER1L4	A9Z1Z3	1794 aa		32.53	■■■□□ 2.8
TM2D3-209	ENST00000560013	TNR	Q92752	1358 aa		32.52	■■■□□ 2.8
TM2D3-209	ENST00000560013	ADGRB1	O14514	1584 aa		32.51	■■■□□ 2.79
TM2D3-209	ENST00000560013	CCER2	I3L3R5	266 aa		32.5	■■■□□ 2.79
TM2D3-209	ENST00000560013	DISP3	Q9P2K9	1392 aa		32.5	■■■□□ 2.79
TM2D3-209	ENST00000560013	C3	P01024	1663 aa		32.47	■■■□□ 2.79
TM2D3-209	ENST00000560013	YTHDC1	Q96MU7	727 aa	Known RBP	32.46	■■■□□ 2.79
TM2D3-209	ENST00000560013	KDM5A	P29375	1690 aa	Known RBP	32.45	■■■□□ 2.79
TM2D3-209	ENST00000560013	MYO3A	Q8NEV4	1616 aa		32.44	■■■□□ 2.78
TM2D3-209	ENST00000560013	SLC24A1	O60721	1099 aa		32.43	■■■□□ 2.78
TM2D3-209	ENST00000560013	TMEM132E	Q6IEE7	984 aa		32.43	■■■□□ 2.78
TM2D3-209	ENST00000560013	RIMS2	Q9UQ26	1411 aa		32.42	■■■□□ 2.78
TM2D3-209	ENST00000560013	CEBPA	P49715	358 aa	Predicted RBP	32.41	■■■□□ 2.78
TM2D3-209	ENST00000560013	PRKRIP1	Q9H875	184 aa	Predicted RBP	32.39	■■■□□ 2.78
TM2D3-209	ENST00000560013	UBR1	Q8IWV7	1749 aa		32.38	■■■□□ 2.77
TM2D3-209	ENST00000560013	CDCA8	Q53HL2	280 aa		32.38	■■■□□ 2.77
TM2D3-209	ENST00000560013	TRAK1	Q9UPV9	953 aa		32.38	■■■□□ 2.77
TM2D3-209	ENST00000560013	NLRP1	Q9C000	1473 aa		32.37	■■■□□ 2.77
TM2D3-209	ENST00000560013	SBNO2	Q9Y2G9	1366 aa		32.35	■■■□□ 2.77
TM2D3-209	ENST00000560013	CENPB	P07199	599 aa	Predicted RBP	32.35	■■■□□ 2.77
TM2D3-209	ENST00000560013	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	32.35	■■■□□ 2.77
TM2D3-209	ENST00000560013	CENPJ	Q9HC77	1338 aa	Predicted RBP	32.34	■■■□□ 2.77
TM2D3-209	ENST00000560013	ALK	Q9UM73	1620 aa		32.34	■■■□□ 2.77
TM2D3-209	ENST00000560013	ASXL1	Q8IXJ9	1541 aa		32.32	■■■□□ 2.76
TM2D3-209	ENST00000560013	HDGF	P51858	240 aa	Known RBP	32.32	■■■□□ 2.76
TM2D3-209	ENST00000560013	ARHGEF28	Q8N1W1	1705 aa	Known RBP	32.31	■■■□□ 2.76
TM2D3-209	ENST00000560013	QRICH2	Q9H0J4	1663 aa		32.31	■■■□□ 2.76
TM2D3-209	ENST00000560013	SENP3	Q9H4L4	574 aa	Predicted RBP	32.3	■■■□□ 2.76
TM2D3-209	ENST00000560013	TMEM2	Q9UHN6	1383 aa		32.27	■■■□□ 2.76
TM2D3-209	ENST00000560013	RIMS1	Q86UR5	1692 aa	Known RBP	32.26	■■■□□ 2.76
TM2D3-209	ENST00000560013	PLPPR3	Q6T4P5	718 aa		32.25	■■■□□ 2.75
TM2D3-209	ENST00000560013	SETD1A	O15047	1707 aa	Known RBP	32.23	■■■□□ 2.75
TM2D3-209	ENST00000560013	ADAMTSL3	P82987	1691 aa		32.23	■■■□□ 2.75
TM2D3-209	ENST00000560013	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.23	■■■□□ 2.75
TM2D3-209	ENST00000560013	PANK3	Q9H999	370 aa		32.23	■■■□□ 2.75
TM2D3-209	ENST00000560013	PER1	O15534	1290 aa	Predicted RBP	32.22	■■■□□ 2.75
TM2D3-209	ENST00000560013	NRXN3	Q9Y4C0	1643 aa		32.22	■■■□□ 2.75
TM2D3-209	ENST00000560013	MYOM1	P52179	1685 aa		32.2	■■■□□ 2.75
TM2D3-209	ENST00000560013	STK26	Q9P289	416 aa		32.2	■■■□□ 2.74
TM2D3-209	ENST00000560013	PTPRM	P28827	1452 aa		32.19	■■■□□ 2.74
TM2D3-209	ENST00000560013	KTN1	Q86UP2	1357 aa	Known RBP	32.16	■■■□□ 2.74
TM2D3-209	ENST00000560013	CNGB1	Q14028	1251 aa	Predicted RBP	32.15	■■■□□ 2.74
TM2D3-209	ENST00000560013	SLIT1	O75093	1534 aa		32.12	■■■□□ 2.73
TM2D3-209	ENST00000560013	RALBP1	Q15311	655 aa		32.11	■■■□□ 2.73
TM2D3-209	ENST00000560013	CCDC184	Q52MB2	194 aa		32.11	■■■□□ 2.73
TM2D3-209	ENST00000560013	THEMIS	Q8N1K5	641 aa	Predicted RBP	32.11	■■■□□ 2.73
TM2D3-209	ENST00000560013	ARHGAP23	Q9P227	1491 aa		32.11	■■■□□ 2.73
TM2D3-209	ENST00000560013	LRPPRC	P42704	1394 aa	Known RBP	32.1	■■■□□ 2.73
TM2D3-209	ENST00000560013	EVC2	Q86UK5	1308 aa		32.1	■■■□□ 2.73
TM2D3-209	ENST00000560013	DLC1	Q96QB1	1528 aa		32.09	■■■□□ 2.73
TM2D3-209	ENST00000560013	LTK	P29376	864 aa		32.09	■■■□□ 2.73
TM2D3-209	ENST00000560013	TXNDC2	Q86VQ3	553 aa		32.09	■■■□□ 2.73
TM2D3-209	ENST00000560013	EID1	Q9Y6B2	187 aa		32.09	■■■□□ 2.73
TM2D3-209	ENST00000560013	PUS7	Q96PZ0	661 aa	Known RBP	32.08	■■■□□ 2.73
TM2D3-209	ENST00000560013	PRAM1	Q96QH2	718 aa		32.08	■■■□□ 2.73
TM2D3-209	ENST00000560013	MRS2	Q9HD23	443 aa		32.08	■■■□□ 2.73
TM2D3-209	ENST00000560013	PLEKHG1	Q9ULL1	1385 aa		32.08	■■■□□ 2.73
TM2D3-209	ENST00000560013	BCAN	Q96GW7	911 aa		32.08	■■■□□ 2.73
TM2D3-209	ENST00000560013	POGK	Q9P215	609 aa		32.08	■■■□□ 2.73
TM2D3-209	ENST00000560013	TULP4	Q9NRJ4	1543 aa		32.06	■■■□□ 2.72
TM2D3-209	ENST00000560013	MET	P08581	1390 aa		32.06	■■■□□ 2.72
TM2D3-209	ENST00000560013	ABCC11	Q96J66	1382 aa		32.06	■■■□□ 2.72
TM2D3-209	ENST00000560013	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.06	■■■□□ 2.72
TM2D3-209	ENST00000560013	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.05	■■■□□ 2.72
TM2D3-209	ENST00000560013	KNSTRN	Q9Y448	316 aa		32.04	■■■□□ 2.72
TM2D3-209	ENST00000560013	PARD3	Q8TEW0	1356 aa		32.04	■■■□□ 2.72
TM2D3-209	ENST00000560013	SETD1B	Q9UPS6	1966 aa	Known RBP	32.03	■■■□□ 2.72
TM2D3-209	ENST00000560013	ADAMTS13	Q76LX8	1427 aa		32.02	■■■□□ 2.72
TM2D3-209	ENST00000560013	MYBBP1A	Q9BQG0	1328 aa	Known RBP	32.02	■■■□□ 2.72
TM2D3-209	ENST00000560013	SCAF1	Q9H7N4	1312 aa	Known RBP	32	■■■□□ 2.71
TM2D3-209	ENST00000560013	KNDC1	Q76NI1	1749 aa		32	■■■□□ 2.71
TM2D3-209	ENST00000560013	CC2D1B	Q5T0F9	858 aa	Known RBP	31.99	■■■□□ 2.71
TM2D3-209	ENST00000560013	MINK1	Q8N4C8	1332 aa	Predicted RBP	31.98	■■■□□ 2.71

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms