RNA–Protein interactions for RNA: ENST00000559738.1

CTDSPL2-207, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 543 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-207ENST00000559738 TMEM134Q9H6X4 195 aa10.33□□□□□ -0.76
CTDSPL2-207ENST00000559738 NECTIN2Q92692 538 aa10.32□□□□□ -0.76
CTDSPL2-207ENST00000559738 BCANQ96GW7 911 aa10.31□□□□□ -0.76
CTDSPL2-207ENST00000559738 OATP04181 439 aa10.3□□□□□ -0.76
CTDSPL2-207ENST00000559738 PXYLP1Q8TE99 480 aa10.3□□□□□ -0.76
CTDSPL2-207ENST00000559738 MTRQ99707 1265 aa10.3□□□□□ -0.76
CTDSPL2-207ENST00000559738 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.29□□□□□ -0.76
CTDSPL2-207ENST00000559738 TJAP1Q5JTD0 557 aa10.29□□□□□ -0.76
CTDSPL2-207ENST00000559738 METTL3Q86U44 580 aaKnown RBP10.29□□□□□ -0.76
CTDSPL2-207ENST00000559738 ZC3H15Q8WU90 426 aaKnown RBP10.28□□□□□ -0.76
CTDSPL2-207ENST00000559738 IL21Q9HBE4 155 aa10.26□□□□□ -0.77
CTDSPL2-207ENST00000559738 MAP2K5Q13163 448 aa10.25□□□□□ -0.77
CTDSPL2-207ENST00000559738 PHOX2BQ99453 314 aa10.25□□□□□ -0.77
CTDSPL2-207ENST00000559738 ZMYND10O75800 440 aa10.24□□□□□ -0.77
CTDSPL2-207ENST00000559738 COPS2P61201 443 aa10.24□□□□□ -0.77
CTDSPL2-207ENST00000559738 PRR14Q9BWN1 585 aa10.24□□□□□ -0.77
CTDSPL2-207ENST00000559738 IRF6O14896 467 aa10.23□□□□□ -0.77
CTDSPL2-207ENST00000559738 NLRP7Q8WX94 980 aa10.23□□□□□ -0.77
CTDSPL2-207ENST00000559738 ZNF516Q92618 1163 aa10.23□□□□□ -0.77
CTDSPL2-207ENST00000559738 RGS20O76081 388 aa10.22□□□□□ -0.77
CTDSPL2-207ENST00000559738 CFHP08603 1231 aa10.22□□□□□ -0.77
CTDSPL2-207ENST00000559738 BARGINQ6ZT62 677 aa10.22□□□□□ -0.77
CTDSPL2-207ENST00000559738 SLC10A3P09131 477 aa10.21□□□□□ -0.77
CTDSPL2-207ENST00000559738 PCDHB3Q9Y5E6 796 aa10.21□□□□□ -0.77
CTDSPL2-207ENST00000559738 MINK1Q8N4C8 1332 aaPredicted RBP10.21□□□□□ -0.78
CTDSPL2-207ENST00000559738 KMT5BQ4FZB7 885 aa10.2□□□□□ -0.78
CTDSPL2-207ENST00000559738 CCDC102AQ96A19 550 aa10.2□□□□□ -0.78
CTDSPL2-207ENST00000559738 ACTN4O43707 911 aaKnown RBP10.18□□□□□ -0.78
CTDSPL2-207ENST00000559738 BLOC1S3Q6QNY0 202 aa10.18□□□□□ -0.78
CTDSPL2-207ENST00000559738 NKX2-3Q8TAU0 364 aa10.17□□□□□ -0.78
CTDSPL2-207ENST00000559738 DAXXQ9UER7 740 aaPredicted RBP10.17□□□□□ -0.78
CTDSPL2-207ENST00000559738 DDX11L8A8MPP1 907 aa10.15□□□□□ -0.78
CTDSPL2-207ENST00000559738 ZPR1O75312 459 aa10.15□□□□□ -0.78
CTDSPL2-207ENST00000559738 RSPH4AQ5TD94 716 aa10.15□□□□□ -0.78
CTDSPL2-207ENST00000559738 KRI1Q8N9T8 703 aaKnown RBP10.15□□□□□ -0.78
CTDSPL2-207ENST00000559738 RDH13Q8NBN7 331 aa10.15□□□□□ -0.78
CTDSPL2-207ENST00000559738 PPP1R18Q6NYC8 613 aa10.14□□□□□ -0.79
CTDSPL2-207ENST00000559738 TLL1O43897 1013 aa10.12□□□□□ -0.79
CTDSPL2-207ENST00000559738 MDM2Q00987 491 aaPredicted RBP10.1□□□□□ -0.79
CTDSPL2-207ENST00000559738 SULF1Q8IWU6 871 aa10.1□□□□□ -0.79
CTDSPL2-207ENST00000559738 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.1□□□□□ -0.79
CTDSPL2-207ENST00000559738 PUS10Q3MIT2 529 aaKnown RBP10.09□□□□□ -0.79
CTDSPL2-207ENST00000559738 NR1I2O75469 434 aa10.08□□□□□ -0.8
CTDSPL2-207ENST00000559738 GGCXP38435 758 aa10.08□□□□□ -0.8
CTDSPL2-207ENST00000559738 TMUB1Q9BVT8 246 aa10.08□□□□□ -0.8
CTDSPL2-207ENST00000559738 IRX2Q9BZI1 471 aaPredicted RBP10.08□□□□□ -0.8
CTDSPL2-207ENST00000559738 REPIN1Q9BWE0 567 aaKnown RBP10.07□□□□□ -0.8
CTDSPL2-207ENST00000559738 SLC24A3Q9HC58 644 aa10.07□□□□□ -0.8
CTDSPL2-207ENST00000559738 FUT2Q10981 343 aa10.06□□□□□ -0.8
CTDSPL2-207ENST00000559738 PRKD2Q9BZL6 878 aa10.06□□□□□ -0.8
CTDSPL2-207ENST00000559738 TRIM66O15016 1216 aa10.05□□□□□ -0.8
CTDSPL2-207ENST00000559738 GCGRP47871 477 aa10.05□□□□□ -0.8
CTDSPL2-207ENST00000559738 AMHR2Q16671 573 aa10.05□□□□□ -0.8
CTDSPL2-207ENST00000559738 AK7Q96M32 723 aa10.05□□□□□ -0.8
CTDSPL2-207ENST00000559738 SCUBE3Q8IX30 993 aa10.04□□□□□ -0.8
CTDSPL2-207ENST00000559738 GPCPD1Q9NPB8 672 aa10.04□□□□□ -0.8
CTDSPL2-207ENST00000559738 S1PR4O95977 384 aa10.03□□□□□ -0.8
CTDSPL2-207ENST00000559738 ADH1BP00325 375 aa10.03□□□□□ -0.8
CTDSPL2-207ENST00000559738 CLCN1P35523 988 aa10.03□□□□□ -0.8
CTDSPL2-207ENST00000559738 CD46P15529 392 aa10.02□□□□□ -0.81
CTDSPL2-207ENST00000559738 ATP6V1AP38606 617 aa10.02□□□□□ -0.81
CTDSPL2-207ENST00000559738 MORN1Q5T089 497 aa10.02□□□□□ -0.81
CTDSPL2-207ENST00000559738 FAM217BQ9NTX9 383 aaPredicted RBP10.02□□□□□ -0.81
CTDSPL2-207ENST00000559738 RNF223E7ERA6 249 aa10.01□□□□□ -0.81
CTDSPL2-207ENST00000559738 PPEF1O14829 653 aaPredicted RBP9.99□□□□□ -0.81
CTDSPL2-207ENST00000559738 TTLL12Q14166 644 aaPredicted RBP9.99□□□□□ -0.81
CTDSPL2-207ENST00000559738 PARP9Q8IXQ6 854 aa9.99□□□□□ -0.81
CTDSPL2-207ENST00000559738 SPSB2Q99619 263 aa9.99□□□□□ -0.81
CTDSPL2-207ENST00000559738 SLC27A5Q9Y2P5 690 aa9.99□□□□□ -0.81
CTDSPL2-207ENST00000559738 V9GY48 417 aaPredicted RBP9.99□□□□□ -0.81
CTDSPL2-207ENST00000559738 SLC6A16Q9GZN6 736 aa9.98□□□□□ -0.81
CTDSPL2-207ENST00000559738 GIGYF2Q6Y7W6 1299 aaKnown RBP9.97□□□□□ -0.81
CTDSPL2-207ENST00000559738 SSTR3P32745 418 aaPredicted RBP9.96□□□□□ -0.82
CTDSPL2-207ENST00000559738 PDE4DQ08499 809 aa9.96□□□□□ -0.82
CTDSPL2-207ENST00000559738 ANKLE1Q8NAG6 615 aa9.96□□□□□ -0.82
CTDSPL2-207ENST00000559738 THAP11Q96EK4 314 aa9.96□□□□□ -0.82
CTDSPL2-207ENST00000559738 KDM4AO75164 1064 aa9.95□□□□□ -0.82
CTDSPL2-207ENST00000559738 FMNL1O95466 1100 aaPredicted RBP9.95□□□□□ -0.82
CTDSPL2-207ENST00000559738 GRIPAP1Q4V328 841 aa9.95□□□□□ -0.82
CTDSPL2-207ENST00000559738 MS4A1P11836 297 aa9.93□□□□□ -0.82
CTDSPL2-207ENST00000559738 RNF19BQ6ZMZ0 732 aa9.93□□□□□ -0.82
CTDSPL2-207ENST00000559738 EMID1Q96A84 441 aaPredicted RBP9.93□□□□□ -0.82
CTDSPL2-207ENST00000559738 GFRA3O60609 400 aa9.92□□□□□ -0.82
CTDSPL2-207ENST00000559738 SLC19A1P41440 591 aa9.92□□□□□ -0.82
CTDSPL2-207ENST00000559738 TPRNQ4KMQ1 711 aa9.92□□□□□ -0.82
CTDSPL2-207ENST00000559738 HLA-CQ95604 372 aa9.92□□□□□ -0.82
CTDSPL2-207ENST00000559738 BRICD5Q6PL45 260 aa9.91□□□□□ -0.82
CTDSPL2-207ENST00000559738 PRDM9Q9NQV7 894 aa9.91□□□□□ -0.82
CTDSPL2-207ENST00000559738 SALL2Q9Y467 1007 aaPredicted RBP9.91□□□□□ -0.82
CTDSPL2-207ENST00000559738 USP46P62068 366 aa9.9□□□□□ -0.82
CTDSPL2-207ENST00000559738 PLA2G2CQ5R387 149 aa9.9□□□□□ -0.82
CTDSPL2-207ENST00000559738 Q6ZNB5 142 aa9.9□□□□□ -0.82
CTDSPL2-207ENST00000559738 FAM160A2Q8N612 972 aaPredicted RBP9.9□□□□□ -0.82
CTDSPL2-207ENST00000559738 HOXA2O43364 376 aa9.89□□□□□ -0.83
CTDSPL2-207ENST00000559738 LAPTM4AQ15012 233 aa9.89□□□□□ -0.83
CTDSPL2-207ENST00000559738 Q3C1V9 767 aa9.89□□□□□ -0.83
CTDSPL2-207ENST00000559738 GUCA2AQ02747 115 aa9.88□□□□□ -0.83
CTDSPL2-207ENST00000559738 SPRYD7Q5W111 196 aa9.88□□□□□ -0.83
CTDSPL2-207ENST00000559738 LIAT1Q6ZQX7 453 aa9.88□□□□□ -0.83
CTDSPL2-207ENST00000559738 BEGAINQ9BUH8 593 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms