RNA–Protein interactions for RNA: ENST00000559686.3

SNRPA1-208, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-208ENST00000559686 ZNF772Q68DY9 489 aaPredicted RBP14.34□□□□□ -0.11
SNRPA1-208ENST00000559686 TET3O43151 1660 aa14.33□□□□□ -0.11
SNRPA1-208ENST00000559686 SRCAPQ6ZRS2 3230 aa14.33□□□□□ -0.12
SNRPA1-208ENST00000559686 NUTM2BA6NNL0 878 aaPredicted RBP14.33□□□□□ -0.12
SNRPA1-208ENST00000559686 NUTM2EB1AL46 878 aaPredicted RBP14.33□□□□□ -0.12
SNRPA1-208ENST00000559686 KCNA4P22459 653 aa14.33□□□□□ -0.12
SNRPA1-208ENST00000559686 NUTM2AQ8IVF1 878 aaPredicted RBP14.33□□□□□ -0.12
SNRPA1-208ENST00000559686 NWD1Q149M9 1564 aa14.33□□□□□ -0.12
SNRPA1-208ENST00000559686 NKTRP30414 1462 aaKnown RBP14.32□□□□□ -0.12
SNRPA1-208ENST00000559686 DUOX2Q9NRD8 1548 aa14.32□□□□□ -0.12
SNRPA1-208ENST00000559686 RXRBP28702 533 aa14.32□□□□□ -0.12
SNRPA1-208ENST00000559686 KDM5AP29375 1690 aaKnown RBP14.31□□□□□ -0.12
SNRPA1-208ENST00000559686 IDI1Q13907 227 aa14.31□□□□□ -0.12
SNRPA1-208ENST00000559686 C14orf37Q86TY3 774 aa14.31□□□□□ -0.12
SNRPA1-208ENST00000559686 SPATA31A6Q5VVP1 1343 aa14.3□□□□□ -0.12
SNRPA1-208ENST00000559686 ARHGAP31Q2M1Z3 1444 aa14.3□□□□□ -0.12
SNRPA1-208ENST00000559686 RRP7BPQ9NSQ0 103 aa14.29□□□□□ -0.12
SNRPA1-208ENST00000559686 SHPRHQ149N8 1683 aa14.29□□□□□ -0.12
SNRPA1-208ENST00000559686 KIF15Q9NS87 1388 aa14.28□□□□□ -0.12
SNRPA1-208ENST00000559686 CHD2O14647 1828 aaKnown RBP14.27□□□□□ -0.12
SNRPA1-208ENST00000559686 ADGRB3O60242 1522 aa14.27□□□□□ -0.12
SNRPA1-208ENST00000559686 MYO5BQ9ULV0 1848 aa14.27□□□□□ -0.13
SNRPA1-208ENST00000559686 FGD6Q6ZV73 1430 aa14.26□□□□□ -0.13
SNRPA1-208ENST00000559686 KANK1Q14678 1352 aa14.26□□□□□ -0.13
SNRPA1-208ENST00000559686 AFF2P51816 1311 aa14.25□□□□□ -0.13
SNRPA1-208ENST00000559686 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.25□□□□□ -0.13
SNRPA1-208ENST00000559686 NUTM2DQ5VT03 806 aaPredicted RBP14.25□□□□□ -0.13
SNRPA1-208ENST00000559686 CROCC2H7BZ55 1655 aa14.24□□□□□ -0.13
SNRPA1-208ENST00000559686 AHDC1Q5TGY3 1603 aaPredicted RBP14.24□□□□□ -0.13
SNRPA1-208ENST00000559686 PPP1R15AO75807 674 aaPredicted RBP14.24□□□□□ -0.13
SNRPA1-208ENST00000559686 ERBINQ96RT1 1412 aa14.24□□□□□ -0.13
SNRPA1-208ENST00000559686 CDK12Q9NYV4 1490 aaPredicted RBP14.22□□□□□ -0.13
SNRPA1-208ENST00000559686 GCC2Q8IWJ2 1684 aa14.22□□□□□ -0.13
SNRPA1-208ENST00000559686 RGS12O14924 1447 aa14.22□□□□□ -0.13
SNRPA1-208ENST00000559686 MYOM3Q5VTT5 1437 aa14.22□□□□□ -0.13
SNRPA1-208ENST00000559686 ATF3P18847 181 aa14.21□□□□□ -0.13
SNRPA1-208ENST00000559686 DIP2AQ14689 1571 aa14.21□□□□□ -0.14
SNRPA1-208ENST00000559686 C8orf37Q96NL8 207 aa14.2□□□□□ -0.14
SNRPA1-208ENST00000559686 CHGAP10645 457 aaKnown RBP14.19□□□□□ -0.14
SNRPA1-208ENST00000559686 KANK4Q5T7N3 995 aaPredicted RBP14.19□□□□□ -0.14
SNRPA1-208ENST00000559686 CADPS2Q86UW7 1296 aa14.19□□□□□ -0.14
SNRPA1-208ENST00000559686 CHIC2Q9UKJ5 165 aa14.19□□□□□ -0.14
SNRPA1-208ENST00000559686 PLEKHG1Q9ULL1 1385 aa14.19□□□□□ -0.14
SNRPA1-208ENST00000559686 ABCC5O15440 1437 aa14.18□□□□□ -0.14
SNRPA1-208ENST00000559686 NOS1P29475 1434 aa14.18□□□□□ -0.14
SNRPA1-208ENST00000559686 RIMS2Q9UQ26 1411 aa14.18□□□□□ -0.14
SNRPA1-208ENST00000559686 BRINP3Q76B58 766 aa14.18□□□□□ -0.14
SNRPA1-208ENST00000559686 QTRT2Q9H974 415 aaKnown RBP14.18□□□□□ -0.14
SNRPA1-208ENST00000559686 ZFYVE9O95405 1425 aa14.17□□□□□ -0.14
SNRPA1-208ENST00000559686 LMTK2Q8IWU2 1503 aa14.16□□□□□ -0.14
SNRPA1-208ENST00000559686 C19orf44Q9H6X5 657 aa14.16□□□□□ -0.14
SNRPA1-208ENST00000559686 PTPN23Q9H3S7 1636 aa14.15□□□□□ -0.14
SNRPA1-208ENST00000559686 RBM6P78332 1123 aaKnown RBP14.15□□□□□ -0.14
SNRPA1-208ENST00000559686 DDX17Q92841 729 aaKnown RBP14.15□□□□□ -0.14
SNRPA1-208ENST00000559686 SETBP1Q9Y6X0 1596 aa14.14□□□□□ -0.15
SNRPA1-208ENST00000559686 SLC52A1Q9NWF4 448 aa14.14□□□□□ -0.15
SNRPA1-208ENST00000559686 TBX22Q9Y458 520 aa14.14□□□□□ -0.15
SNRPA1-208ENST00000559686 TMEM131LA2VDJ0 1609 aa14.14□□□□□ -0.15
SNRPA1-208ENST00000559686 ASXL1Q8IXJ9 1541 aa14.14□□□□□ -0.15
SNRPA1-208ENST00000559686 DAPK1P53355 1430 aa14.14□□□□□ -0.15
SNRPA1-208ENST00000559686 ADAMTS2O95450 1211 aa14.13□□□□□ -0.15
SNRPA1-208ENST00000559686 ZRANB1Q9UGI0 708 aa14.13□□□□□ -0.15
SNRPA1-208ENST00000559686 NCOA3Q9Y6Q9 1424 aa14.13□□□□□ -0.15
SNRPA1-208ENST00000559686 NHSL1Q5SYE7 1610 aa14.12□□□□□ -0.15
SNRPA1-208ENST00000559686 HDGFP51858 240 aaKnown RBP14.12□□□□□ -0.15
SNRPA1-208ENST00000559686 NGLY1Q96IV0 654 aa14.12□□□□□ -0.15
SNRPA1-208ENST00000559686 ATAD2Q6PL18 1390 aa14.11□□□□□ -0.15
SNRPA1-208ENST00000559686 ADAMTS13Q76LX8 1427 aa14.11□□□□□ -0.15
SNRPA1-208ENST00000559686 AMOTL2Q9Y2J4 779 aa14.1□□□□□ -0.15
SNRPA1-208ENST00000559686 ANKRD30AQ9BXX3 1397 aa14.09□□□□□ -0.15
SNRPA1-208ENST00000559686 VPS8Q8N3P4 1428 aa14.09□□□□□ -0.15
SNRPA1-208ENST00000559686 SETD5Q9C0A6 1442 aa14.09□□□□□ -0.15
SNRPA1-208ENST00000559686 EP400Q96L91 3159 aa14.09□□□□□ -0.15
SNRPA1-208ENST00000559686 LRRC59Q96AG4 307 aaKnown RBP14.09□□□□□ -0.15
SNRPA1-208ENST00000559686 PNPLA6Q8IY17 1366 aa14.09□□□□□ -0.15
SNRPA1-208ENST00000559686 PTPRUQ92729 1446 aa14.08□□□□□ -0.15
SNRPA1-208ENST00000559686 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.08□□□□□ -0.16
SNRPA1-208ENST00000559686 TRPM2O94759 1503 aa14.08□□□□□ -0.16
SNRPA1-208ENST00000559686 U3KPZ7 1027 aaPredicted RBP14.07□□□□□ -0.16
SNRPA1-208ENST00000559686 MST1RQ04912 1400 aa14.07□□□□□ -0.16
SNRPA1-208ENST00000559686 USP21Q9UK80 565 aa14.06□□□□□ -0.16
SNRPA1-208ENST00000559686 RPRD2Q5VT52 1461 aaKnown RBP14.06□□□□□ -0.16
SNRPA1-208ENST00000559686 PIK3R4Q99570 1358 aa14.05□□□□□ -0.16
SNRPA1-208ENST00000559686 UNC13BO14795 1591 aa14.05□□□□□ -0.16
SNRPA1-208ENST00000559686 DCCP43146 1447 aa14.03□□□□□ -0.16
SNRPA1-208ENST00000559686 NALCNQ8IZF0 1738 aa14.03□□□□□ -0.16
SNRPA1-208ENST00000559686 XRN1Q8IZH2 1706 aaKnown RBP14.03□□□□□ -0.16
SNRPA1-208ENST00000559686 E9PCH4 1651 aa14.02□□□□□ -0.16
SNRPA1-208ENST00000559686 TRPC5Q9UL62 973 aaPredicted RBP14.01□□□□□ -0.17
SNRPA1-208ENST00000559686 ANKRD50Q9ULJ7 1429 aa13.99□□□□□ -0.17
SNRPA1-208ENST00000559686 NRXN3Q9Y4C0 1643 aa13.99□□□□□ -0.17
SNRPA1-208ENST00000559686 FAM50AQ14320 339 aaKnown RBP13.98□□□□□ -0.17
SNRPA1-208ENST00000559686 LOC105371045A0A1W2PR82 267 aa13.97□□□□□ -0.17
SNRPA1-208ENST00000559686 CAPN15O75808 1086 aa13.97□□□□□ -0.17
SNRPA1-208ENST00000559686 ATRNO75882 1429 aa13.97□□□□□ -0.17
SNRPA1-208ENST00000559686 ADGRL3Q9HAR2 1447 aa13.97□□□□□ -0.17
SNRPA1-208ENST00000559686 METP08581 1390 aa13.96□□□□□ -0.17
SNRPA1-208ENST00000559686 ADGRL2O95490 1459 aa13.96□□□□□ -0.17
SNRPA1-208ENST00000559686 APLP2Q06481 763 aa13.96□□□□□ -0.17
SNRPA1-208ENST00000559686 ORAI2Q96SN7 254 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms