RNA–Protein interactions for RNA: ENST00000559069.1

LRRC49-214, Transcript of leucine rich repeat containing 49, human

TSL 4

Gene LRRC49, Length 570 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRRC49-214	ENST00000559069	IFFO2	Q5TF58	517 aa		7.69	□□□□□ -1.18
LRRC49-214	ENST00000559069	THSD4	Q6ZMP0	1018 aa		7.69	□□□□□ -1.18
LRRC49-214	ENST00000559069	WNT2B	Q93097	391 aa		7.69	□□□□□ -1.18
LRRC49-214	ENST00000559069	DDRGK1	Q96HY6	314 aa		7.69	□□□□□ -1.18
LRRC49-214	ENST00000559069	GPCPD1	Q9NPB8	672 aa		7.69	□□□□□ -1.18
LRRC49-214	ENST00000559069	BHMG1	C9JSJ3	638 aa	Predicted RBP	7.68	□□□□□ -1.18
LRRC49-214	ENST00000559069	ZBED2	Q9BTP6	218 aa		7.68	□□□□□ -1.18
LRRC49-214	ENST00000559069	TRIM6-TRIM34	B2RNG4	842 aa		7.67	□□□□□ -1.18
LRRC49-214	ENST00000559069	PROX2	Q3B8N5	592 aa		7.67	□□□□□ -1.18
LRRC49-214	ENST00000559069	EYA1	Q99502	592 aa		7.67	□□□□□ -1.18
LRRC49-214	ENST00000559069	RBM46	Q8TBY0	533 aa	Known RBP	7.66	□□□□□ -1.18
LRRC49-214	ENST00000559069	FAM217B	Q9NTX9	383 aa	Predicted RBP	7.66	□□□□□ -1.18
LRRC49-214	ENST00000559069	RCCD1	A6NED2	376 aa		7.65	□□□□□ -1.18
LRRC49-214	ENST00000559069	SSTR3	P32745	418 aa	Predicted RBP	7.65	□□□□□ -1.18
LRRC49-214	ENST00000559069	NUDT18	Q6ZVK8	323 aa		7.65	□□□□□ -1.18
LRRC49-214	ENST00000559069	PNMA3	Q9UL41	463 aa		7.64	□□□□□ -1.19
LRRC49-214	ENST00000559069	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	7.63	□□□□□ -1.19
LRRC49-214	ENST00000559069	NBPF26	B4DH59	902 aa		7.63	□□□□□ -1.19
LRRC49-214	ENST00000559069	SMAP	O00193	183 aa		7.63	□□□□□ -1.19
LRRC49-214	ENST00000559069	TATDN2	Q93075	761 aa		7.63	□□□□□ -1.19
LRRC49-214	ENST00000559069		A0A0G2JS52	829 aa		7.62	□□□□□ -1.19
LRRC49-214	ENST00000559069	PACS2	Q86VP3	889 aa		7.62	□□□□□ -1.19
LRRC49-214	ENST00000559069	BEGAIN	Q9BUH8	593 aa		7.62	□□□□□ -1.19
LRRC49-214	ENST00000559069	ONECUT3	O60422	494 aa	Predicted RBP	7.61	□□□□□ -1.19
LRRC49-214	ENST00000559069	ANKK1	Q8NFD2	765 aa		7.61	□□□□□ -1.19
LRRC49-214	ENST00000559069	KIAA1468	Q9P260	1216 aa		7.61	□□□□□ -1.19
LRRC49-214	ENST00000559069	RABGEF1	Q9UJ41	708 aa		7.61	□□□□□ -1.19
LRRC49-214	ENST00000559069	DNAJB2	P25686	324 aa		7.6	□□□□□ -1.19
LRRC49-214	ENST00000559069	IRX2	Q9BZI1	471 aa	Predicted RBP	7.6	□□□□□ -1.19
LRRC49-214	ENST00000559069	SH3D19	Q5HYK7	790 aa		7.59	□□□□□ -1.19
LRRC49-214	ENST00000559069	C14orf37	Q86TY3	774 aa		7.59	□□□□□ -1.19
LRRC49-214	ENST00000559069	TMEM134	Q9H6X4	195 aa		7.59	□□□□□ -1.19
LRRC49-214	ENST00000559069	GOPC	Q9HD26	462 aa		7.59	□□□□□ -1.19
LRRC49-214	ENST00000559069	NYAP1	Q6ZVC0	841 aa		7.57	□□□□□ -1.2
LRRC49-214	ENST00000559069	LAPTM4B	Q86VI4	370 aa		7.57	□□□□□ -1.2
LRRC49-214	ENST00000559069	SEPT9	Q9UHD8	586 aa	Predicted RBP	7.57	□□□□□ -1.2
LRRC49-214	ENST00000559069	DDX11L8	A8MPP1	907 aa		7.56	□□□□□ -1.2
LRRC49-214	ENST00000559069	CD46	P15529	392 aa		7.56	□□□□□ -1.2
LRRC49-214	ENST00000559069	ITGBL1	O95965	494 aa	Predicted RBP	7.55	□□□□□ -1.2
LRRC49-214	ENST00000559069	MYSM1	Q5VVJ2	828 aa		7.55	□□□□□ -1.2
LRRC49-214	ENST00000559069	PCMTD1	Q96MG8	357 aa	Predicted RBP	7.55	□□□□□ -1.2
LRRC49-214	ENST00000559069	SKIV2L	Q15477	1246 aa	Known RBP	7.54	□□□□□ -1.2
LRRC49-214	ENST00000559069	PROCA1	Q8NCQ7	364 aa	Predicted RBP	7.54	□□□□□ -1.2
LRRC49-214	ENST00000559069	TBC1D2	Q9BYX2	928 aa		7.54	□□□□□ -1.2
LRRC49-214	ENST00000559069	RSPH6A	Q9H0K4	717 aa		7.54	□□□□□ -1.2
LRRC49-214	ENST00000559069	SOWAHB	A6NEL2	793 aa		7.53	□□□□□ -1.2
LRRC49-214	ENST00000559069	SWT1	Q5T5J6	900 aa	Known RBP	7.53	□□□□□ -1.2
LRRC49-214	ENST00000559069	POLR3E	Q9NVU0	708 aa		7.53	□□□□□ -1.2
LRRC49-214	ENST00000559069	BCAM	P50895	628 aa		7.52	□□□□□ -1.21
LRRC49-214	ENST00000559069	SULF1	Q8IWU6	871 aa		7.52	□□□□□ -1.21
LRRC49-214	ENST00000559069	SPIRE2	Q8WWL2	714 aa		7.52	□□□□□ -1.21
LRRC49-214	ENST00000559069	ZFR	Q96KR1	1074 aa	Known RBP	7.52	□□□□□ -1.21
LRRC49-214	ENST00000559069	SLC10A3	P09131	477 aa		7.51	□□□□□ -1.21
LRRC49-214	ENST00000559069	CLK2	P49760	499 aa	Known RBP	7.51	□□□□□ -1.21
LRRC49-214	ENST00000559069	LIMD1	Q9UGP4	676 aa		7.51	□□□□□ -1.21
LRRC49-214	ENST00000559069	FAM98C	Q17RN3	349 aa	Known RBP	7.5	□□□□□ -1.21
LRRC49-214	ENST00000559069	RDH13	Q8NBN7	331 aa		7.5	□□□□□ -1.21
LRRC49-214	ENST00000559069	KCNC4	Q03721	635 aa		7.49	□□□□□ -1.21
LRRC49-214	ENST00000559069	FBXO31	Q5XUX0	539 aa	Predicted RBP	7.49	□□□□□ -1.21
LRRC49-214	ENST00000559069	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	7.49	□□□□□ -1.21
LRRC49-214	ENST00000559069	MOXD2P	A6NHM9	499 aa		7.48	□□□□□ -1.21
LRRC49-214	ENST00000559069	DIXDC1	Q155Q3	683 aa		7.48	□□□□□ -1.21
LRRC49-214	ENST00000559069	SAMD7	Q7Z3H4	446 aa		7.48	□□□□□ -1.21
LRRC49-214	ENST00000559069	NUTM1	Q86Y26	1132 aa		7.48	□□□□□ -1.21
LRRC49-214	ENST00000559069	SPTLC1	O15269	473 aa		7.47	□□□□□ -1.21
LRRC49-214	ENST00000559069	GCGR	P47871	477 aa		7.47	□□□□□ -1.21
LRRC49-214	ENST00000559069	RSBN1L	Q6PCB5	846 aa	Predicted RBP	7.47	□□□□□ -1.21
LRRC49-214	ENST00000559069	RIC3	Q7Z5B4	369 aa		7.47	□□□□□ -1.21
LRRC49-214	ENST00000559069	LRCH3	Q96II8	777 aa		7.47	□□□□□ -1.21
LRRC49-214	ENST00000559069	WBP1L	Q9NX94	342 aa		7.47	□□□□□ -1.21
LRRC49-214	ENST00000559069	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	7.47	□□□□□ -1.21
LRRC49-214	ENST00000559069	NDUFV2	P19404	249 aa		7.46	□□□□□ -1.22
LRRC49-214	ENST00000559069	TSR3	Q9UJK0	312 aa	Known RBP	7.46	□□□□□ -1.22
LRRC49-214	ENST00000559069	ATP1B4	Q9UN42	357 aa	Predicted RBP	7.46	□□□□□ -1.22
LRRC49-214	ENST00000559069	KDM4A	O75164	1064 aa		7.45	□□□□□ -1.22
LRRC49-214	ENST00000559069	HPS5	Q9UPZ3	1129 aa		7.45	□□□□□ -1.22
LRRC49-214	ENST00000559069	TUSC1	Q2TAM9	212 aa		7.44	□□□□□ -1.22
LRRC49-214	ENST00000559069		Q6ZNB5	142 aa		7.44	□□□□□ -1.22
LRRC49-214	ENST00000559069	HLA-C	Q95604	372 aa		7.44	□□□□□ -1.22
LRRC49-214	ENST00000559069	PCDHB15	Q9Y5E8	787 aa		7.44	□□□□□ -1.22
LRRC49-214	ENST00000559069	HOXA2	O43364	376 aa		7.43	□□□□□ -1.22
LRRC49-214	ENST00000559069	HDGF	P51858	240 aa	Known RBP	7.43	□□□□□ -1.22
LRRC49-214	ENST00000559069	FLII	Q13045	1269 aa		7.43	□□□□□ -1.22
LRRC49-214	ENST00000559069	CSPP1	Q1MSJ5	1256 aa		7.43	□□□□□ -1.22
LRRC49-214	ENST00000559069	RSPH4A	Q5TD94	716 aa		7.43	□□□□□ -1.22
LRRC49-214	ENST00000559069	SLF2	Q8IX21	1173 aa		7.43	□□□□□ -1.22
LRRC49-214	ENST00000559069	RNF40	O75150	1001 aa		7.42	□□□□□ -1.22
LRRC49-214	ENST00000559069	CFH	P08603	1231 aa		7.42	□□□□□ -1.22
LRRC49-214	ENST00000559069	RFC5	P40937	340 aa		7.42	□□□□□ -1.22
LRRC49-214	ENST00000559069	GUCA2A	Q02747	115 aa		7.42	□□□□□ -1.22
LRRC49-214	ENST00000559069	MCM6	Q14566	821 aa		7.42	□□□□□ -1.22
LRRC49-214	ENST00000559069	QPCT	Q16769	361 aa		7.42	□□□□□ -1.22
LRRC49-214	ENST00000559069	PPP2R2D	Q66LE6	453 aa		7.42	□□□□□ -1.22
LRRC49-214	ENST00000559069	LILRB3	O75022	631 aa		7.41	□□□□□ -1.22
LRRC49-214	ENST00000559069	GJA5	P36382	358 aa		7.41	□□□□□ -1.22
LRRC49-214	ENST00000559069	USP46	P62068	366 aa		7.41	□□□□□ -1.22
LRRC49-214	ENST00000559069	LAPTM4A	Q15012	233 aa		7.41	□□□□□ -1.22
LRRC49-214	ENST00000559069	ZMYND15	Q9H091	742 aa		7.41	□□□□□ -1.22
LRRC49-214	ENST00000559069	SUPT5H	O00267	1087 aa	Known RBP	7.4	□□□□□ -1.22
LRRC49-214	ENST00000559069	FDX1	P10109	184 aa		7.4	□□□□□ -1.22

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms