RNA–Protein interactions for RNA: ENST00000559037.1

CASC4-207, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 680 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-207ENST00000559037 ZMYND10O75800 440 aa9.91□□□□□ -0.82
CASC4-207ENST00000559037 FECHP22830 423 aa9.9□□□□□ -0.82
CASC4-207ENST00000559037 BARGINQ6ZT62 677 aa9.9□□□□□ -0.82
CASC4-207ENST00000559037 IRF6O14896 467 aa9.89□□□□□ -0.83
CASC4-207ENST00000559037 SLF2Q8IX21 1173 aa9.89□□□□□ -0.83
CASC4-207ENST00000559037 TMEM134Q9H6X4 195 aa9.89□□□□□ -0.83
CASC4-207ENST00000559037 RCCD1A6NED2 376 aa9.88□□□□□ -0.83
CASC4-207ENST00000559037 SAMD7Q7Z3H4 446 aa9.88□□□□□ -0.83
CASC4-207ENST00000559037 TSR3Q9UJK0 312 aaKnown RBP9.87□□□□□ -0.83
CASC4-207ENST00000559037 BCAMP50895 628 aa9.86□□□□□ -0.83
CASC4-207ENST00000559037 KRI1Q8N9T8 703 aaKnown RBP9.85□□□□□ -0.83
CASC4-207ENST00000559037 FAM161AQ3B820 660 aa9.84□□□□□ -0.83
CASC4-207ENST00000559037 SWT1Q5T5J6 900 aaKnown RBP9.84□□□□□ -0.83
CASC4-207ENST00000559037 RSPH4AQ5TD94 716 aa9.84□□□□□ -0.83
CASC4-207ENST00000559037 CCDC102AQ96A19 550 aa9.84□□□□□ -0.83
CASC4-207ENST00000559037 HPS5Q9UPZ3 1129 aa9.84□□□□□ -0.83
CASC4-207ENST00000559037 PPP4CP60510 307 aa9.83□□□□□ -0.84
CASC4-207ENST00000559037 PRR14Q9BWN1 585 aa9.83□□□□□ -0.84
CASC4-207ENST00000559037 PTPN5P54829 565 aa9.82□□□□□ -0.84
CASC4-207ENST00000559037 DAXXQ9UER7 740 aaPredicted RBP9.82□□□□□ -0.84
CASC4-207ENST00000559037 SULF1Q8IWU6 871 aa9.81□□□□□ -0.84
CASC4-207ENST00000559037 SCRIBQ14160 1630 aa9.81□□□□□ -0.84
CASC4-207ENST00000559037 RNF40O75150 1001 aa9.8□□□□□ -0.84
CASC4-207ENST00000559037 WBP1LQ9NX94 342 aa9.8□□□□□ -0.84
CASC4-207ENST00000559037 CLCN1P35523 988 aa9.78□□□□□ -0.84
CASC4-207ENST00000559037 AK7Q96M32 723 aa9.78□□□□□ -0.84
CASC4-207ENST00000559037 SHROOM4Q9ULL8 1493 aa9.78□□□□□ -0.84
CASC4-207ENST00000559037 AMHR2Q16671 573 aa9.77□□□□□ -0.85
CASC4-207ENST00000559037 PHOX2BQ99453 314 aa9.77□□□□□ -0.85
CASC4-207ENST00000559037 KMT5BQ4FZB7 885 aa9.76□□□□□ -0.85
CASC4-207ENST00000559037 GPCPD1Q9NPB8 672 aa9.76□□□□□ -0.85
CASC4-207ENST00000559037 IFFO2Q5TF58 517 aa9.73□□□□□ -0.85
CASC4-207ENST00000559037 MDM2Q00987 491 aaPredicted RBP9.72□□□□□ -0.85
CASC4-207ENST00000559037 TRIM66O15016 1216 aa9.71□□□□□ -0.86
CASC4-207ENST00000559037 ITGBL1O95965 494 aaPredicted RBP9.71□□□□□ -0.86
CASC4-207ENST00000559037 CFHP08603 1231 aa9.71□□□□□ -0.86
CASC4-207ENST00000559037 TMUB1Q9BVT8 246 aa9.71□□□□□ -0.86
CASC4-207ENST00000559037 DDX11L8A8MPP1 907 aa9.7□□□□□ -0.86
CASC4-207ENST00000559037 ACTN4O43707 911 aaKnown RBP9.7□□□□□ -0.86
CASC4-207ENST00000559037 SLC10A3P09131 477 aa9.7□□□□□ -0.86
CASC4-207ENST00000559037 RDH13Q8NBN7 331 aa9.7□□□□□ -0.86
CASC4-207ENST00000559037 APLP1P51693 650 aa9.69□□□□□ -0.86
CASC4-207ENST00000559037 TTLL12Q14166 644 aaPredicted RBP9.69□□□□□ -0.86
CASC4-207ENST00000559037 SLC24A3Q9HC58 644 aa9.69□□□□□ -0.86
CASC4-207ENST00000559037 CC2D2AQ9P2K1 1620 aa9.68□□□□□ -0.86
CASC4-207ENST00000559037 NLRP7Q8WX94 980 aa9.68□□□□□ -0.86
CASC4-207ENST00000559037 FAM217BQ9NTX9 383 aaPredicted RBP9.68□□□□□ -0.86
CASC4-207ENST00000559037 CD46P15529 392 aa9.67□□□□□ -0.86
CASC4-207ENST00000559037 PLA2G2EQ9NZK7 142 aa9.67□□□□□ -0.86
CASC4-207ENST00000559037 EIF4G1Q04637 1599 aaKnown RBP9.67□□□□□ -0.86
CASC4-207ENST00000559037 GCGRP47871 477 aa9.66□□□□□ -0.86
CASC4-207ENST00000559037 IL21Q9HBE4 155 aa9.66□□□□□ -0.86
CASC4-207ENST00000559037 PCDHB3Q9Y5E6 796 aa9.66□□□□□ -0.86
CASC4-207ENST00000559037 KCNC4Q03721 635 aa9.65□□□□□ -0.86
CASC4-207ENST00000559037 GRIPAP1Q4V328 841 aa9.65□□□□□ -0.86
CASC4-207ENST00000559037 USP46P62068 366 aa9.64□□□□□ -0.87
CASC4-207ENST00000559037 PDE4DQ08499 809 aa9.64□□□□□ -0.87
CASC4-207ENST00000559037 GIGYF2Q6Y7W6 1299 aaKnown RBP9.64□□□□□ -0.87
CASC4-207ENST00000559037 PARP9Q8IXQ6 854 aa9.64□□□□□ -0.87
CASC4-207ENST00000559037 TJAP1Q5JTD0 557 aa9.63□□□□□ -0.87
CASC4-207ENST00000559037 MTRQ99707 1265 aa9.63□□□□□ -0.87
CASC4-207ENST00000559037 NR1I2O75469 434 aa9.62□□□□□ -0.87
CASC4-207ENST00000559037 SSTR3P32745 418 aaPredicted RBP9.62□□□□□ -0.87
CASC4-207ENST00000559037 ATP6V1AP38606 617 aa9.61□□□□□ -0.87
CASC4-207ENST00000559037 DIXDC1Q155Q3 683 aa9.61□□□□□ -0.87
CASC4-207ENST00000559037 TPRNQ4KMQ1 711 aa9.61□□□□□ -0.87
CASC4-207ENST00000559037 CECR2Q9BXF3 1484 aa9.6□□□□□ -0.87
CASC4-207ENST00000559037 KDM4AO75164 1064 aa9.6□□□□□ -0.87
CASC4-207ENST00000559037 REPIN1Q9BWE0 567 aaKnown RBP9.6□□□□□ -0.87
CASC4-207ENST00000559037 ZPR1O75312 459 aa9.58□□□□□ -0.88
CASC4-207ENST00000559037 FUT2Q10981 343 aa9.58□□□□□ -0.88
CASC4-207ENST00000559037 BLOC1S3Q6QNY0 202 aa9.58□□□□□ -0.88
CASC4-207ENST00000559037 COPS2P61201 443 aa9.57□□□□□ -0.88
CASC4-207ENST00000559037 NUTM1Q86Y26 1132 aa9.57□□□□□ -0.88
CASC4-207ENST00000559037 MORN1Q5T089 497 aa9.56□□□□□ -0.88
CASC4-207ENST00000559037 SALL2Q9Y467 1007 aaPredicted RBP9.56□□□□□ -0.88
CASC4-207ENST00000559037 A0A0G2JS52 829 aa9.54□□□□□ -0.88
CASC4-207ENST00000559037 Q3C1V9 767 aa9.54□□□□□ -0.88
CASC4-207ENST00000559037 BEGAINQ9BUH8 593 aa9.54□□□□□ -0.88
CASC4-207ENST00000559037 HOXA2O43364 376 aa9.53□□□□□ -0.88
CASC4-207ENST00000559037 MS4A1P11836 297 aa9.53□□□□□ -0.88
CASC4-207ENST00000559037 GGCXP38435 758 aa9.53□□□□□ -0.88
CASC4-207ENST00000559037 SCUBE3Q8IX30 993 aa9.53□□□□□ -0.88
CASC4-207ENST00000559037 RGS20O76081 388 aa9.52□□□□□ -0.89
CASC4-207ENST00000559037 GJA5P36382 358 aa9.52□□□□□ -0.89
CASC4-207ENST00000559037 ADH1BP00325 375 aa9.51□□□□□ -0.89
CASC4-207ENST00000559037 PUS10Q3MIT2 529 aaKnown RBP9.51□□□□□ -0.89
CASC4-207ENST00000559037 ZNF516Q92618 1163 aa9.51□□□□□ -0.89
CASC4-207ENST00000559037 DDRGK1Q96HY6 314 aa9.51□□□□□ -0.89
CASC4-207ENST00000559037 FMNL1O95466 1100 aaPredicted RBP9.5□□□□□ -0.89
CASC4-207ENST00000559037 SPIRE2Q8WWL2 714 aa9.5□□□□□ -0.89
CASC4-207ENST00000559037 KDM4CQ9H3R0 1056 aa9.5□□□□□ -0.89
CASC4-207ENST00000559037 SLC27A5Q9Y2P5 690 aa9.5□□□□□ -0.89
CASC4-207ENST00000559037 THAP11Q96EK4 314 aa9.48□□□□□ -0.89
CASC4-207ENST00000559037 SPSB2Q99619 263 aa9.48□□□□□ -0.89
CASC4-207ENST00000559037 RSPH6AQ9H0K4 717 aa9.48□□□□□ -0.89
CASC4-207ENST00000559037 TBC1D2Q9BYX2 928 aa9.47□□□□□ -0.89
CASC4-207ENST00000559037 MSS51Q4VC12 460 aa9.46□□□□□ -0.9
CASC4-207ENST00000559037 BRICD5Q6PL45 260 aa9.46□□□□□ -0.9
CASC4-207ENST00000559037 TLL1O43897 1013 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms