RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 POTEHQ6S545 545 aa18.14■□□□□ 0.49
TPM1-216ENST00000558910 SSUH2Q9Y2M2 353 aa18.14■□□□□ 0.49
TPM1-216ENST00000558910 NUP155O75694 1391 aa18.14■□□□□ 0.49
TPM1-216ENST00000558910 PLA2R1Q13018 1463 aa18.13■□□□□ 0.49
TPM1-216ENST00000558910 IDI1Q13907 227 aa18.12■□□□□ 0.49
TPM1-216ENST00000558910 ARHGAP31Q2M1Z3 1444 aa18.12■□□□□ 0.49
TPM1-216ENST00000558910 TRIM52Q96A61 297 aa18.11■□□□□ 0.49
TPM1-216ENST00000558910 VWDEQ8N2E2 1590 aa18.1■□□□□ 0.49
TPM1-216ENST00000558910 EFCAB6Q5THR3 1501 aa18.09■□□□□ 0.49
TPM1-216ENST00000558910 LMTK2Q8IWU2 1503 aa18.09■□□□□ 0.49
TPM1-216ENST00000558910 TXNDC2Q86VQ3 553 aa18.09■□□□□ 0.49
TPM1-216ENST00000558910 BCANQ96GW7 911 aa18.08■□□□□ 0.48
TPM1-216ENST00000558910 LTKP29376 864 aa18.07■□□□□ 0.48
TPM1-216ENST00000558910 NPHP4O75161 1426 aaPredicted RBP18.06■□□□□ 0.48
TPM1-216ENST00000558910 PIK3C2BO00750 1634 aa18.06■□□□□ 0.48
TPM1-216ENST00000558910 PITPNM1O00562 1244 aa18.06■□□□□ 0.48
TPM1-216ENST00000558910 DISP3Q9P2K9 1392 aa18.05■□□□□ 0.48
TPM1-216ENST00000558910 UNC13BO14795 1591 aa18.05■□□□□ 0.48
TPM1-216ENST00000558910 SYNMO15061 1565 aa18.05■□□□□ 0.48
TPM1-216ENST00000558910 NEURL4Q96JN8 1562 aa18.05■□□□□ 0.48
TPM1-216ENST00000558910 NUTM2DQ5VT03 806 aaPredicted RBP18.05■□□□□ 0.48
TPM1-216ENST00000558910 EID1Q9Y6B2 187 aa18.05■□□□□ 0.48
TPM1-216ENST00000558910 POLR1AO95602 1720 aaPredicted RBP18.04■□□□□ 0.48
TPM1-216ENST00000558910 UBR1Q8IWV7 1749 aa18.04■□□□□ 0.48
TPM1-216ENST00000558910 NAIPQ13075 1403 aa18.04■□□□□ 0.48
TPM1-216ENST00000558910 NOS1P29475 1434 aa18.03■□□□□ 0.48
TPM1-216ENST00000558910 TET3O43151 1660 aa18.03■□□□□ 0.48
TPM1-216ENST00000558910 LTBP4Q8N2S1 1624 aa18.02■□□□□ 0.48
TPM1-216ENST00000558910 SLC52A1Q9NWF4 448 aa18.01■□□□□ 0.47
TPM1-216ENST00000558910 PPP1R15AO75807 674 aaPredicted RBP18■□□□□ 0.47
TPM1-216ENST00000558910 TMEM2Q9UHN6 1383 aa18■□□□□ 0.47
TPM1-216ENST00000558910 SCAF11Q99590 1463 aaKnown RBP18■□□□□ 0.47
TPM1-216ENST00000558910 E9PCH4 1651 aa17.99■□□□□ 0.47
TPM1-216ENST00000558910 IQGAP3Q86VI3 1631 aa17.99■□□□□ 0.47
TPM1-216ENST00000558910 UBAP1LF5GYI3 381 aa17.99■□□□□ 0.47
TPM1-216ENST00000558910 SLC26A8Q96RN1 970 aa17.99■□□□□ 0.47
TPM1-216ENST00000558910 GCC2Q8IWJ2 1684 aa17.99■□□□□ 0.47
TPM1-216ENST00000558910 IQGAP1P46940 1657 aa17.97■□□□□ 0.47
TPM1-216ENST00000558910 RPRD2Q5VT52 1461 aaKnown RBP17.97■□□□□ 0.47
TPM1-216ENST00000558910 ZNF326Q5BKZ1 582 aaKnown RBP17.96■□□□□ 0.47
TPM1-216ENST00000558910 ADGRB3O60242 1522 aa17.96■□□□□ 0.47
TPM1-216ENST00000558910 HFM1A2PYH4 1435 aa17.96■□□□□ 0.47
TPM1-216ENST00000558910 PIP4K2BP78356 416 aa17.95■□□□□ 0.46
TPM1-216ENST00000558910 MED14O60244 1454 aa17.95■□□□□ 0.46
TPM1-216ENST00000558910 ARHGAP23Q9P227 1491 aa17.95■□□□□ 0.46
TPM1-216ENST00000558910 SLIT1O75093 1534 aa17.94■□□□□ 0.46
TPM1-216ENST00000558910 RIMS2Q9UQ26 1411 aa17.93■□□□□ 0.46
TPM1-216ENST00000558910 RBM33Q96EV2 1170 aaKnown RBP17.93■□□□□ 0.46
TPM1-216ENST00000558910 MYO5BQ9ULV0 1848 aa17.91■□□□□ 0.46
TPM1-216ENST00000558910 SPDYE4A6NLX3 237 aa17.89■□□□□ 0.45
TPM1-216ENST00000558910 CLEC11AQ9Y240 323 aa17.89■□□□□ 0.45
TPM1-216ENST00000558910 SPDYE1Q8NFV5 336 aaPredicted RBP17.88■□□□□ 0.45
TPM1-216ENST00000558910 TMEM131LA2VDJ0 1609 aa17.87■□□□□ 0.45
TPM1-216ENST00000558910 HDGFP51858 240 aaKnown RBP17.87■□□□□ 0.45
TPM1-216ENST00000558910 CPS1P31327 1500 aa17.86■□□□□ 0.45
TPM1-216ENST00000558910 STRCP1A6NGW2 1772 aa17.85■□□□□ 0.45
TPM1-216ENST00000558910 SPHKAPQ2M3C7 1700 aa17.85■□□□□ 0.45
TPM1-216ENST00000558910 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.85■□□□□ 0.45
TPM1-216ENST00000558910 ZFYVE9O95405 1425 aa17.84■□□□□ 0.45
TPM1-216ENST00000558910 PROSER2Q86WR7 435 aaPredicted RBP17.84■□□□□ 0.45
TPM1-216ENST00000558910 PIP4P2Q8N4L2 257 aa17.84■□□□□ 0.45
TPM1-216ENST00000558910 MPHOSPH9Q99550 1183 aa17.84■□□□□ 0.45
TPM1-216ENST00000558910 SETD5Q9C0A6 1442 aa17.83■□□□□ 0.45
TPM1-216ENST00000558910 KDM5AP29375 1690 aaKnown RBP17.83■□□□□ 0.44
TPM1-216ENST00000558910 LRRC7Q96NW7 1537 aa17.82■□□□□ 0.44
TPM1-216ENST00000558910 TOM1O60784 492 aa17.82■□□□□ 0.44
TPM1-216ENST00000558910 CLTCL1P53675 1640 aa17.82■□□□□ 0.44
TPM1-216ENST00000558910 IQSEC2Q5JU85 1478 aa17.82■□□□□ 0.44
TPM1-216ENST00000558910 PLEKHG1Q9ULL1 1385 aa17.81■□□□□ 0.44
TPM1-216ENST00000558910 KCNA6P17658 529 aa17.81■□□□□ 0.44
TPM1-216ENST00000558910 RAB3GAP2Q9H2M9 1393 aa17.8■□□□□ 0.44
TPM1-216ENST00000558910 RGL3Q3MIN7 710 aa17.8■□□□□ 0.44
TPM1-216ENST00000558910 FXR2P51116 673 aaKnown RBP eCLIP17.79■□□□□ 0.44
TPM1-216ENST00000558910 TRPM2O94759 1503 aa17.78■□□□□ 0.44
TPM1-216ENST00000558910 C14orf37Q86TY3 774 aa17.78■□□□□ 0.44
TPM1-216ENST00000558910 TMEM94Q12767 1356 aa17.78■□□□□ 0.44
TPM1-216ENST00000558910 HSPA1LP34931 641 aa17.75■□□□□ 0.43
TPM1-216ENST00000558910 TBX22Q9Y458 520 aa17.75■□□□□ 0.43
TPM1-216ENST00000558910 ADAMTS13Q76LX8 1427 aa17.73■□□□□ 0.43
TPM1-216ENST00000558910 CCDC144AA2RUR9 1427 aa17.72■□□□□ 0.43
TPM1-216ENST00000558910 AMOTL2Q9Y2J4 779 aa17.72■□□□□ 0.43
TPM1-216ENST00000558910 KIF1BO60333 1816 aa17.72■□□□□ 0.43
TPM1-216ENST00000558910 NEXMIFQ5QGS0 1516 aa17.69■□□□□ 0.42
TPM1-216ENST00000558910 METP08581 1390 aa17.68■□□□□ 0.42
TPM1-216ENST00000558910 VGFO15240 615 aaPredicted RBP17.68■□□□□ 0.42
TPM1-216ENST00000558910 PTPRUQ92729 1446 aa17.68■□□□□ 0.42
TPM1-216ENST00000558910 XIRP1Q702N8 1843 aaKnown RBP17.68■□□□□ 0.42
TPM1-216ENST00000558910 MSH6P52701 1360 aa17.66■□□□□ 0.42
TPM1-216ENST00000558910 ALKQ9UM73 1620 aa17.66■□□□□ 0.42
TPM1-216ENST00000558910 ADGRF5Q8IZF2 1346 aa17.65■□□□□ 0.42
TPM1-216ENST00000558910 NWD1Q149M9 1564 aa17.65■□□□□ 0.42
TPM1-216ENST00000558910 CHD2O14647 1828 aaKnown RBP17.65■□□□□ 0.42
TPM1-216ENST00000558910 NKTRP30414 1462 aaKnown RBP17.64■□□□□ 0.41
TPM1-216ENST00000558910 DIP2AQ14689 1571 aa17.63■□□□□ 0.41
TPM1-216ENST00000558910 NRXN3Q9Y4C0 1643 aa17.63■□□□□ 0.41
TPM1-216ENST00000558910 STK26Q9P289 416 aa17.63■□□□□ 0.41
TPM1-216ENST00000558910 RPGRIP1LQ68CZ1 1315 aa17.63■□□□□ 0.41
TPM1-216ENST00000558910 PRR29P0C7W0 189 aa17.62■□□□□ 0.41
TPM1-216ENST00000558910 ATF3P18847 181 aa17.61■□□□□ 0.41
TPM1-216ENST00000558910 KDM2AQ9Y2K7 1162 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms