RNA–Protein interactions for RNA: ENST00000558880.1

TRAF3-206, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 374 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-206ENST00000558880 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.16□□□□□ -0.62
TRAF3-206ENST00000558880 HNRNPMP52272 730 aaKnown RBP eCLIP11.15□□□□□ -0.62
TRAF3-206ENST00000558880 NLRP6P59044 892 aa11.15□□□□□ -0.62
TRAF3-206ENST00000558880 ABCC5O15440 1437 aa11.15□□□□□ -0.62
TRAF3-206ENST00000558880 MYO5CQ9NQX4 1742 aa11.15□□□□□ -0.63
TRAF3-206ENST00000558880 NKX1-1Q15270 411 aaPredicted RBP11.14□□□□□ -0.63
TRAF3-206ENST00000558880 ZNF777Q9ULD5 760 aaPredicted RBP11.14□□□□□ -0.63
TRAF3-206ENST00000558880 SCAPERQ9BY12 1400 aa11.14□□□□□ -0.63
TRAF3-206ENST00000558880 PTPN23Q9H3S7 1636 aa11.13□□□□□ -0.63
TRAF3-206ENST00000558880 FRMPD1Q5SYB0 1578 aa11.13□□□□□ -0.63
TRAF3-206ENST00000558880 AFAP1Q8N556 730 aa11.13□□□□□ -0.63
TRAF3-206ENST00000558880 FBXO22Q8NEZ5 403 aa11.13□□□□□ -0.63
TRAF3-206ENST00000558880 OTUD5Q96G74 571 aa11.13□□□□□ -0.63
TRAF3-206ENST00000558880 SYCP2Q9BX26 1530 aa11.13□□□□□ -0.63
TRAF3-206ENST00000558880 ITSN2Q9NZM3 1697 aa11.11□□□□□ -0.63
TRAF3-206ENST00000558880 POGZQ7Z3K3 1410 aa11.11□□□□□ -0.63
TRAF3-206ENST00000558880 DENND4BO75064 1496 aaPredicted RBP11.1□□□□□ -0.63
TRAF3-206ENST00000558880 PLEKHH2Q8IVE3 1493 aa11.1□□□□□ -0.63
TRAF3-206ENST00000558880 DAPK1P53355 1430 aa11.09□□□□□ -0.63
TRAF3-206ENST00000558880 KDM5CP41229 1560 aa11.09□□□□□ -0.63
TRAF3-206ENST00000558880 ARHGEF5Q12774 1597 aa11.09□□□□□ -0.63
TRAF3-206ENST00000558880 MLECQ14165 292 aa11.09□□□□□ -0.63
TRAF3-206ENST00000558880 L3MBTL3Q96JM7 780 aaPredicted RBP11.09□□□□□ -0.63
TRAF3-206ENST00000558880 SCUBE2Q9NQ36 999 aa11.09□□□□□ -0.63
TRAF3-206ENST00000558880 FAM50AQ14320 339 aaKnown RBP11.08□□□□□ -0.64
TRAF3-206ENST00000558880 BOLA1Q9Y3E2 137 aa11.08□□□□□ -0.64
TRAF3-206ENST00000558880 CCDC141Q6ZP82 1450 aa11.07□□□□□ -0.64
TRAF3-206ENST00000558880 G3V3G9 751 aa11.07□□□□□ -0.64
TRAF3-206ENST00000558880 MAMSTRQ6ZN01 415 aa11.07□□□□□ -0.64
TRAF3-206ENST00000558880 YEATS2Q9ULM3 1422 aa11.07□□□□□ -0.64
TRAF3-206ENST00000558880 MLH3Q9UHC1 1453 aa11.06□□□□□ -0.64
TRAF3-206ENST00000558880 DNMT1P26358 1616 aaKnown RBP11.06□□□□□ -0.64
TRAF3-206ENST00000558880 CFAP74Q9C0B2 1584 aa11.06□□□□□ -0.64
TRAF3-206ENST00000558880 RICTORQ6R327 1708 aa11.06□□□□□ -0.64
TRAF3-206ENST00000558880 ZNF518AQ6AHZ1 1483 aa11.06□□□□□ -0.64
TRAF3-206ENST00000558880 ZMYM4Q5VZL5 1548 aa11.05□□□□□ -0.64
TRAF3-206ENST00000558880 ARHGEF40Q8TER5 1519 aa11.05□□□□□ -0.64
TRAF3-206ENST00000558880 PPP1R37O75864 691 aa11.05□□□□□ -0.64
TRAF3-206ENST00000558880 RSPH4AQ5TD94 716 aa11.05□□□□□ -0.64
TRAF3-206ENST00000558880 ADGRL2O95490 1459 aa11.05□□□□□ -0.64
TRAF3-206ENST00000558880 SHANK2Q9UPX8 1470 aa11.05□□□□□ -0.64
TRAF3-206ENST00000558880 ZFYVE16Q7Z3T8 1539 aa11.04□□□□□ -0.64
TRAF3-206ENST00000558880 MAST1Q9Y2H9 1570 aa11.04□□□□□ -0.64
TRAF3-206ENST00000558880 RTEL1-TNFRSF6BF6WH68 1400 aa11.04□□□□□ -0.64
TRAF3-206ENST00000558880 NCOA1Q15788 1441 aa11.04□□□□□ -0.64
TRAF3-206ENST00000558880 C9orf84Q5VXU9 1444 aa11.04□□□□□ -0.64
TRAF3-206ENST00000558880 C3orf67Q6ZVT6 689 aa11.04□□□□□ -0.64
TRAF3-206ENST00000558880 INO80Q9ULG1 1556 aaPredicted RBP11.03□□□□□ -0.64
TRAF3-206ENST00000558880 STRCQ7RTU9 1775 aa11.03□□□□□ -0.64
TRAF3-206ENST00000558880 TRIM26Q12899 539 aaPredicted RBP11.03□□□□□ -0.64
TRAF3-206ENST00000558880 MICALL2Q8IY33 904 aa11.03□□□□□ -0.64
TRAF3-206ENST00000558880 CHIC2Q9UKJ5 165 aa11.03□□□□□ -0.64
TRAF3-206ENST00000558880 SIGLEC1Q9BZZ2 1709 aa11.02□□□□□ -0.65
TRAF3-206ENST00000558880 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.02□□□□□ -0.65
TRAF3-206ENST00000558880 FER1L4A9Z1Z3 1794 aa11.02□□□□□ -0.65
TRAF3-206ENST00000558880 KIDINS220Q9ULH0 1771 aa11.02□□□□□ -0.65
TRAF3-206ENST00000558880 SPAG9O60271 1321 aaKnown RBP11.02□□□□□ -0.65
TRAF3-206ENST00000558880 ROCK1Q13464 1354 aa11.02□□□□□ -0.65
TRAF3-206ENST00000558880 ITGAEP38570 1179 aa11.01□□□□□ -0.65
TRAF3-206ENST00000558880 SLAIN1Q8ND83 568 aa11.01□□□□□ -0.65
TRAF3-206ENST00000558880 PREX1Q8TCU6 1659 aa11.01□□□□□ -0.65
TRAF3-206ENST00000558880 NAIPQ13075 1403 aa11.01□□□□□ -0.65
TRAF3-206ENST00000558880 MAGI2Q86UL8 1455 aa11□□□□□ -0.65
TRAF3-206ENST00000558880 CEBPAP49715 358 aaPredicted RBP11□□□□□ -0.65
TRAF3-206ENST00000558880 BBXQ8WY36 941 aaPredicted RBP11□□□□□ -0.65
TRAF3-206ENST00000558880 CROCC2H7BZ55 1655 aa11□□□□□ -0.65
TRAF3-206ENST00000558880 ATP7AQ04656 1500 aa10.99□□□□□ -0.65
TRAF3-206ENST00000558880 DIP2CQ9Y2E4 1556 aa10.99□□□□□ -0.65
TRAF3-206ENST00000558880 GTPBP6O43824 516 aaPredicted RBP10.99□□□□□ -0.65
TRAF3-206ENST00000558880 TSPY4P0CV99 314 aa10.99□□□□□ -0.65
TRAF3-206ENST00000558880 TSPY10P0CW01 314 aa10.99□□□□□ -0.65
TRAF3-206ENST00000558880 RRP7BPQ9NSQ0 103 aa10.99□□□□□ -0.65
TRAF3-206ENST00000558880 ABCA6Q8N139 1617 aa10.98□□□□□ -0.65
TRAF3-206ENST00000558880 TMEM121BQ9BXQ6 578 aaPredicted RBP10.98□□□□□ -0.65
TRAF3-206ENST00000558880 HFM1A2PYH4 1435 aa10.98□□□□□ -0.65
TRAF3-206ENST00000558880 DHX29Q7Z478 1369 aaKnown RBP10.97□□□□□ -0.65
TRAF3-206ENST00000558880 KIF15Q9NS87 1388 aa10.97□□□□□ -0.65
TRAF3-206ENST00000558880 PLXNC1O60486 1568 aa10.97□□□□□ -0.65
TRAF3-206ENST00000558880 ATP10AO60312 1499 aa10.96□□□□□ -0.65
TRAF3-206ENST00000558880 ANKRD30AQ9BXX3 1397 aa10.96□□□□□ -0.65
TRAF3-206ENST00000558880 REREQ9P2R6 1566 aa10.94□□□□□ -0.66
TRAF3-206ENST00000558880 A2MP01023 1474 aa10.94□□□□□ -0.66
TRAF3-206ENST00000558880 UHRF1BP1Q6BDS2 1440 aa10.94□□□□□ -0.66
TRAF3-206ENST00000558880 PCGF6Q9BYE7 350 aa10.94□□□□□ -0.66
TRAF3-206ENST00000558880 RYDENQ9NUL5 291 aaKnown RBP10.94□□□□□ -0.66
TRAF3-206ENST00000558880 LTBP4Q8N2S1 1624 aa10.94□□□□□ -0.66
TRAF3-206ENST00000558880 ANKRD50Q9ULJ7 1429 aa10.93□□□□□ -0.66
TRAF3-206ENST00000558880 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.93□□□□□ -0.66
TRAF3-206ENST00000558880 DUOX2Q9NRD8 1548 aa10.93□□□□□ -0.66
TRAF3-206ENST00000558880 ADGBQ8N7X0 1667 aa10.92□□□□□ -0.66
TRAF3-206ENST00000558880 TMEM92Q6UXU6 159 aa10.92□□□□□ -0.66
TRAF3-206ENST00000558880 AGLP35573 1532 aa10.92□□□□□ -0.66
TRAF3-206ENST00000558880 PTPRTO14522 1441 aa10.92□□□□□ -0.66
TRAF3-206ENST00000558880 ERBINQ96RT1 1412 aa10.92□□□□□ -0.66
TRAF3-206ENST00000558880 SETD5Q9C0A6 1442 aa10.92□□□□□ -0.66
TRAF3-206ENST00000558880 RAB3GAP2Q9H2M9 1393 aa10.91□□□□□ -0.66
TRAF3-206ENST00000558880 UBAP1LF5GYI3 381 aa10.91□□□□□ -0.66
TRAF3-206ENST00000558880 PAXIP1Q6ZW49 1069 aaPredicted RBP10.91□□□□□ -0.66
TRAF3-206ENST00000558880 CFAP44Q96MT7 982 aa10.91□□□□□ -0.66
TRAF3-206ENST00000558880 MROH1Q8NDA8 1641 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms