RNA–Protein interactions for RNA: ENST00000558845.1

HMG20A-206, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 644 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-206ENST00000558845 ADGRB3O60242 1522 aa16.07■□□□□ 0.16
HMG20A-206ENST00000558845 MLECQ14165 292 aa16.06■□□□□ 0.16
HMG20A-206ENST00000558845 KIF1BO60333 1816 aa16.05■□□□□ 0.16
HMG20A-206ENST00000558845 FER1L4A9Z1Z3 1794 aa16.05■□□□□ 0.16
HMG20A-206ENST00000558845 ADAMTSL3P82987 1691 aa16.05■□□□□ 0.16
HMG20A-206ENST00000558845 UGGT1Q9NYU2 1555 aa16.04■□□□□ 0.16
HMG20A-206ENST00000558845 RBM42Q9BTD8 480 aaKnown RBP16.04■□□□□ 0.16
HMG20A-206ENST00000558845 MYOM2P54296 1465 aa16.01■□□□□ 0.15
HMG20A-206ENST00000558845 RPGRIP1LQ68CZ1 1315 aa16■□□□□ 0.15
HMG20A-206ENST00000558845 KDM5AP29375 1690 aaKnown RBP16■□□□□ 0.15
HMG20A-206ENST00000558845 PRAG1Q86YV5 1406 aa16■□□□□ 0.15
HMG20A-206ENST00000558845 CFAP65Q6ZU64 1925 aaKnown RBP16■□□□□ 0.15
HMG20A-206ENST00000558845 IFT172Q9UG01 1749 aa15.99■□□□□ 0.15
HMG20A-206ENST00000558845 C3P01024 1663 aa15.99■□□□□ 0.15
HMG20A-206ENST00000558845 TMEM131LA2VDJ0 1609 aa15.99■□□□□ 0.15
HMG20A-206ENST00000558845 IDI1Q13907 227 aa15.99■□□□□ 0.15
HMG20A-206ENST00000558845 FBXO31Q5XUX0 539 aaPredicted RBP15.99■□□□□ 0.15
HMG20A-206ENST00000558845 RALGAPBQ86X10 1494 aa15.98■□□□□ 0.15
HMG20A-206ENST00000558845 MADDQ8WXG6 1647 aa15.98■□□□□ 0.15
HMG20A-206ENST00000558845 TNRQ92752 1358 aa15.98■□□□□ 0.15
HMG20A-206ENST00000558845 NLRP1Q9C000 1473 aa15.97■□□□□ 0.15
HMG20A-206ENST00000558845 NRXN1Q9ULB1 1477 aa15.97■□□□□ 0.15
HMG20A-206ENST00000558845 NBPF8Q3BBV2 869 aa15.97■□□□□ 0.15
HMG20A-206ENST00000558845 DCAF11Q8TEB1 546 aa15.97■□□□□ 0.15
HMG20A-206ENST00000558845 ZFYVE9O95405 1425 aa15.96■□□□□ 0.15
HMG20A-206ENST00000558845 RGL3Q3MIN7 710 aa15.96■□□□□ 0.15
HMG20A-206ENST00000558845 POLA2Q14181 598 aa15.95■□□□□ 0.14
HMG20A-206ENST00000558845 GPRASP1Q5JY77 1395 aa15.94■□□□□ 0.14
HMG20A-206ENST00000558845 PPLO60437 1756 aa15.94■□□□□ 0.14
HMG20A-206ENST00000558845 NEXMIFQ5QGS0 1516 aa15.94■□□□□ 0.14
HMG20A-206ENST00000558845 RIMS1Q86UR5 1692 aaKnown RBP15.93■□□□□ 0.14
HMG20A-206ENST00000558845 A2ML1A8K2U0 1454 aa15.93■□□□□ 0.14
HMG20A-206ENST00000558845 KIAA1210Q9ULL0 1709 aa15.93■□□□□ 0.14
HMG20A-206ENST00000558845 LAMC1P11047 1609 aa15.93■□□□□ 0.14
HMG20A-206ENST00000558845 TRPM1Q7Z4N2 1603 aa15.93■□□□□ 0.14
HMG20A-206ENST00000558845 KDM2AQ9Y2K7 1162 aa15.9■□□□□ 0.14
HMG20A-206ENST00000558845 PIK3C2GO75747 1445 aa15.89■□□□□ 0.13
HMG20A-206ENST00000558845 ZNF316A6NFI3 1004 aaPredicted RBP15.89■□□□□ 0.13
HMG20A-206ENST00000558845 UBR1Q8IWV7 1749 aa15.88■□□□□ 0.13
HMG20A-206ENST00000558845 VGFO15240 615 aaPredicted RBP15.88■□□□□ 0.13
HMG20A-206ENST00000558845 MYO5BQ9ULV0 1848 aa15.87■□□□□ 0.13
HMG20A-206ENST00000558845 CHGAP10645 457 aaKnown RBP15.87■□□□□ 0.13
HMG20A-206ENST00000558845 CEBPAP49715 358 aaPredicted RBP15.87■□□□□ 0.13
HMG20A-206ENST00000558845 ZNF326Q5BKZ1 582 aaKnown RBP15.87■□□□□ 0.13
HMG20A-206ENST00000558845 MYO3AQ8NEV4 1616 aa15.86■□□□□ 0.13
HMG20A-206ENST00000558845 PTPRMP28827 1452 aa15.86■□□□□ 0.13
HMG20A-206ENST00000558845 SETD1BQ9UPS6 1966 aaKnown RBP15.86■□□□□ 0.13
HMG20A-206ENST00000558845 SETBP1Q9Y6X0 1596 aa15.85■□□□□ 0.13
HMG20A-206ENST00000558845 EIF4G2P78344 907 aaKnown RBP eCLIP15.85■□□□□ 0.13
HMG20A-206ENST00000558845 ADGRF5Q8IZF2 1346 aa15.85■□□□□ 0.13
HMG20A-206ENST00000558845 ZNF142P52746 1687 aaPredicted RBP15.85■□□□□ 0.13
HMG20A-206ENST00000558845 ROCK2O75116 1388 aaKnown RBP15.85■□□□□ 0.13
HMG20A-206ENST00000558845 ARHGAP23Q9P227 1491 aa15.84■□□□□ 0.13
HMG20A-206ENST00000558845 SLIT1O75093 1534 aa15.84■□□□□ 0.13
HMG20A-206ENST00000558845 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.84■□□□□ 0.13
HMG20A-206ENST00000558845 STAG3Q9UJ98 1225 aa15.84■□□□□ 0.13
HMG20A-206ENST00000558845 HDGFP51858 240 aaKnown RBP15.83■□□□□ 0.12
HMG20A-206ENST00000558845 TMEM2Q9UHN6 1383 aa15.83■□□□□ 0.12
HMG20A-206ENST00000558845 RIMS2Q9UQ26 1411 aa15.83■□□□□ 0.12
HMG20A-206ENST00000558845 CEP170BQ9Y4F5 1589 aaPredicted RBP15.83■□□□□ 0.12
HMG20A-206ENST00000558845 C14orf93Q9H972 538 aaKnown RBP15.82■□□□□ 0.12
HMG20A-206ENST00000558845 USP47Q96K76 1375 aa15.81■□□□□ 0.12
HMG20A-206ENST00000558845 CARD11Q9BXL7 1154 aa15.81■□□□□ 0.12
HMG20A-206ENST00000558845 CHRDL2Q6WN34 429 aa15.8■□□□□ 0.12
HMG20A-206ENST00000558845 ADGRB1O14514 1584 aa15.79■□□□□ 0.12
HMG20A-206ENST00000558845 HSPA5P11021 654 aaKnown RBP15.79■□□□□ 0.12
HMG20A-206ENST00000558845 NBPF1Q3BBV0 1214 aa15.79■□□□□ 0.12
HMG20A-206ENST00000558845 THEMISQ8N1K5 641 aaPredicted RBP15.79■□□□□ 0.12
HMG20A-206ENST00000558845 IQGAP1P46940 1657 aa15.79■□□□□ 0.12
HMG20A-206ENST00000558845 SCAF11Q99590 1463 aaKnown RBP15.78■□□□□ 0.12
HMG20A-206ENST00000558845 FOXD4L1Q9NU39 408 aa15.77■□□□□ 0.12
HMG20A-206ENST00000558845 CFAP70Q5T0N1 1121 aa15.76■□□□□ 0.11
HMG20A-206ENST00000558845 PLEKHG1Q9ULL1 1385 aa15.75■□□□□ 0.11
HMG20A-206ENST00000558845 ALKQ9UM73 1620 aa15.75■□□□□ 0.11
HMG20A-206ENST00000558845 ATF5Q9Y2D1 282 aaPredicted RBP15.74■□□□□ 0.11
HMG20A-206ENST00000558845 NRXN3Q9Y4C0 1643 aa15.74■□□□□ 0.11
HMG20A-206ENST00000558845 SETD1AO15047 1707 aaKnown RBP15.74■□□□□ 0.11
HMG20A-206ENST00000558845 EIF3AQ14152 1382 aaKnown RBP15.74■□□□□ 0.11
HMG20A-206ENST00000558845 ASXL1Q8IXJ9 1541 aa15.73■□□□□ 0.11
HMG20A-206ENST00000558845 KDM4FA0A1W2PPD8 638 aa15.72■□□□□ 0.11
HMG20A-206ENST00000558845 MED14O60244 1454 aa15.71■□□□□ 0.11
HMG20A-206ENST00000558845 POLR1AO95602 1720 aaPredicted RBP15.71■□□□□ 0.11
HMG20A-206ENST00000558845 EID1Q9Y6B2 187 aa15.71■□□□□ 0.11
HMG20A-206ENST00000558845 SBNO2Q9Y2G9 1366 aa15.71■□□□□ 0.11
HMG20A-206ENST00000558845 DIP2AQ14689 1571 aa15.7■□□□□ 0.1
HMG20A-206ENST00000558845 ADAMTS13Q76LX8 1427 aa15.69■□□□□ 0.1
HMG20A-206ENST00000558845 ST20-MTHFSA0A0A6YYL1 179 aa15.69■□□□□ 0.1
HMG20A-206ENST00000558845 LTKP29376 864 aa15.69■□□□□ 0.1
HMG20A-206ENST00000558845 NUTM2DQ5VT03 806 aaPredicted RBP15.69■□□□□ 0.1
HMG20A-206ENST00000558845 TXNDC2Q86VQ3 553 aa15.69■□□□□ 0.1
HMG20A-206ENST00000558845 DLC1Q96QB1 1528 aa15.68■□□□□ 0.1
HMG20A-206ENST00000558845 TESK2Q96S53 571 aa15.67■□□□□ 0.1
HMG20A-206ENST00000558845 YTHDC2Q9H6S0 1430 aaKnown RBP15.67■□□□□ 0.1
HMG20A-206ENST00000558845 LRPPRCP42704 1394 aaKnown RBP15.66■□□□□ 0.1
HMG20A-206ENST00000558845 ABCC11Q96J66 1382 aa15.66■□□□□ 0.1
HMG20A-206ENST00000558845 CCDC7Q96M83 1385 aa15.66■□□□□ 0.1
HMG20A-206ENST00000558845 TECPR2O15040 1411 aa15.66■□□□□ 0.1
HMG20A-206ENST00000558845 ANKLE2Q86XL3 938 aa15.65■□□□□ 0.1
HMG20A-206ENST00000558845 HIRIP3Q9BW71 556 aaPredicted RBP15.65■□□□□ 0.1
HMG20A-206ENST00000558845 TBX22Q9Y458 520 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms