RNA–Protein interactions for RNA: ENST00000558220.1

SHC4-205, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-205ENST00000558220 CEBPAP49715 358 aaPredicted RBP13.4□□□□□ -0.26
SHC4-205ENST00000558220 UHRF1BP1Q6BDS2 1440 aa13.39□□□□□ -0.27
SHC4-205ENST00000558220 CNTLNQ9NXG0 1405 aa13.39□□□□□ -0.27
SHC4-205ENST00000558220 ZNF777Q9ULD5 760 aaPredicted RBP13.39□□□□□ -0.27
SHC4-205ENST00000558220 PLEKHH2Q8IVE3 1493 aa13.39□□□□□ -0.27
SHC4-205ENST00000558220 GPATCH8Q9UKJ3 1502 aaKnown RBP13.39□□□□□ -0.27
SHC4-205ENST00000558220 C3P01024 1663 aa13.38□□□□□ -0.27
SHC4-205ENST00000558220 BOLA1Q9Y3E2 137 aa13.38□□□□□ -0.27
SHC4-205ENST00000558220 CFDP1Q9UEE9 299 aaPredicted RBP13.37□□□□□ -0.27
SHC4-205ENST00000558220 KIAA1107Q9UPP5 1409 aa13.37□□□□□ -0.27
SHC4-205ENST00000558220 SPAG9O60271 1321 aaKnown RBP13.37□□□□□ -0.27
SHC4-205ENST00000558220 SAMD9LQ8IVG5 1584 aa13.37□□□□□ -0.27
SHC4-205ENST00000558220 MTUS2Q5JR59 1369 aa13.36□□□□□ -0.27
SHC4-205ENST00000558220 CERKQ8TCT0 537 aa13.36□□□□□ -0.27
SHC4-205ENST00000558220 CCNB3Q8WWL7 1395 aa13.35□□□□□ -0.27
SHC4-205ENST00000558220 POTEB3A0JP26 581 aa13.35□□□□□ -0.27
SHC4-205ENST00000558220 POTEBQ6S5H4 581 aa13.35□□□□□ -0.27
SHC4-205ENST00000558220 MROH2AA6NES4 1674 aa13.34□□□□□ -0.27
SHC4-205ENST00000558220 SYCP2Q9BX26 1530 aa13.34□□□□□ -0.27
SHC4-205ENST00000558220 STRCQ7RTU9 1775 aa13.34□□□□□ -0.27
SHC4-205ENST00000558220 G3V3G9 751 aa13.33□□□□□ -0.28
SHC4-205ENST00000558220 HNRNPMP52272 730 aaKnown RBP eCLIP13.33□□□□□ -0.28
SHC4-205ENST00000558220 HS3ST6Q96QI5 342 aa13.33□□□□□ -0.28
SHC4-205ENST00000558220 SUPT6HQ7KZ85 1726 aaKnown RBP13.33□□□□□ -0.28
SHC4-205ENST00000558220 FAM205CA6NFA0 338 aa13.32□□□□□ -0.28
SHC4-205ENST00000558220 ATP7AQ04656 1500 aa13.32□□□□□ -0.28
SHC4-205ENST00000558220 EHBP1L1Q8N3D4 1523 aa13.31□□□□□ -0.28
SHC4-205ENST00000558220 ADGBQ8N7X0 1667 aa13.31□□□□□ -0.28
SHC4-205ENST00000558220 NPATQ14207 1427 aa13.3□□□□□ -0.28
SHC4-205ENST00000558220 INO80Q9ULG1 1556 aaPredicted RBP13.3□□□□□ -0.28
SHC4-205ENST00000558220 PTPRTO14522 1441 aa13.3□□□□□ -0.28
SHC4-205ENST00000558220 A2MP01023 1474 aa13.29□□□□□ -0.28
SHC4-205ENST00000558220 HOXB3P14651 431 aaPredicted RBP13.29□□□□□ -0.28
SHC4-205ENST00000558220 KRTAP3-3Q9BYR6 98 aa13.29□□□□□ -0.28
SHC4-205ENST00000558220 KRTAP3-2Q9BYR7 98 aa13.29□□□□□ -0.28
SHC4-205ENST00000558220 ZMYM3Q14202 1370 aa13.29□□□□□ -0.28
SHC4-205ENST00000558220 PLXNC1O60486 1568 aa13.28□□□□□ -0.28
SHC4-205ENST00000558220 EFCAB3Q8N7B9 438 aa13.28□□□□□ -0.28
SHC4-205ENST00000558220 RSPH4AQ5TD94 716 aa13.27□□□□□ -0.29
SHC4-205ENST00000558220 CEP162Q5TB80 1403 aa13.27□□□□□ -0.29
SHC4-205ENST00000558220 CLTCQ00610 1675 aaKnown RBP13.27□□□□□ -0.29
SHC4-205ENST00000558220 RTEL1-TNFRSF6BF6WH68 1400 aa13.26□□□□□ -0.29
SHC4-205ENST00000558220 TIAM1Q13009 1591 aa13.26□□□□□ -0.29
SHC4-205ENST00000558220 GGT6Q6P531 493 aa13.25□□□□□ -0.29
SHC4-205ENST00000558220 NCOA1Q15788 1441 aa13.24□□□□□ -0.29
SHC4-205ENST00000558220 MBD5Q9P267 1494 aa13.23□□□□□ -0.29
SHC4-205ENST00000558220 CAMSAP1Q5T5Y3 1602 aa13.22□□□□□ -0.29
SHC4-205ENST00000558220 IQSEC2Q5JU85 1478 aa13.22□□□□□ -0.29
SHC4-205ENST00000558220 ZNF142P52746 1687 aaPredicted RBP13.21□□□□□ -0.29
SHC4-205ENST00000558220 ZNF644Q9H582 1327 aaPredicted RBP13.21□□□□□ -0.29
SHC4-205ENST00000558220 PKD2Q13563 968 aa13.21□□□□□ -0.29
SHC4-205ENST00000558220 MYO3AQ8NEV4 1616 aa13.21□□□□□ -0.3
SHC4-205ENST00000558220 DHX29Q7Z478 1369 aaKnown RBP13.2□□□□□ -0.3
SHC4-205ENST00000558220 ZNF710Q8N1W2 664 aa13.2□□□□□ -0.3
SHC4-205ENST00000558220 PLA2R1Q13018 1463 aa13.2□□□□□ -0.3
SHC4-205ENST00000558220 NCOA2Q15596 1464 aa13.2□□□□□ -0.3
SHC4-205ENST00000558220 CCDC141Q6ZP82 1450 aa13.2□□□□□ -0.3
SHC4-205ENST00000558220 PTPRKQ15262 1439 aa13.2□□□□□ -0.3
SHC4-205ENST00000558220 FAM135AQ9P2D6 1515 aa13.19□□□□□ -0.3
SHC4-205ENST00000558220 TSPY4P0CV99 314 aa13.19□□□□□ -0.3
SHC4-205ENST00000558220 TSPY10P0CW01 314 aa13.19□□□□□ -0.3
SHC4-205ENST00000558220 HOXB1P14653 301 aaPredicted RBP13.19□□□□□ -0.3
SHC4-205ENST00000558220 CEP170BQ9Y4F5 1589 aaPredicted RBP13.19□□□□□ -0.3
SHC4-205ENST00000558220 LTBP4Q8N2S1 1624 aa13.17□□□□□ -0.3
SHC4-205ENST00000558220 CAMSAP2Q08AD1 1489 aa13.17□□□□□ -0.3
SHC4-205ENST00000558220 DOK7Q18PE1 504 aa13.17□□□□□ -0.3
SHC4-205ENST00000558220 ARHGEF5Q12774 1597 aa13.16□□□□□ -0.3
SHC4-205ENST00000558220 KIF3BO15066 747 aa13.16□□□□□ -0.3
SHC4-205ENST00000558220 MICALL2Q8IY33 904 aa13.15□□□□□ -0.3
SHC4-205ENST00000558220 RNF25Q96BH1 459 aaPredicted RBP13.15□□□□□ -0.3
SHC4-205ENST00000558220 NCKAP5LQ9HCH0 1330 aa13.14□□□□□ -0.31
SHC4-205ENST00000558220 WASHC2CQ9Y4E1 1318 aa13.14□□□□□ -0.31
SHC4-205ENST00000558220 VPS8Q8N3P4 1428 aa13.14□□□□□ -0.31
SHC4-205ENST00000558220 RIOK3O14730 519 aaKnown RBP13.14□□□□□ -0.31
SHC4-205ENST00000558220 TMEM92Q6UXU6 159 aa13.14□□□□□ -0.31
SHC4-205ENST00000558220 A2ML1A8K2U0 1454 aa13.14□□□□□ -0.31
SHC4-205ENST00000558220 TCOF1Q13428 1488 aaKnown RBP13.14□□□□□ -0.31
SHC4-205ENST00000558220 KDM5DQ9BY66 1539 aa13.13□□□□□ -0.31
SHC4-205ENST00000558220 LRRC9Q6ZRR7 1453 aa13.13□□□□□ -0.31
SHC4-205ENST00000558220 DNMT1P26358 1616 aaKnown RBP13.13□□□□□ -0.31
SHC4-205ENST00000558220 MAP3K1Q13233 1512 aa13.13□□□□□ -0.31
SHC4-205ENST00000558220 PZPP20742 1482 aa13.12□□□□□ -0.31
SHC4-205ENST00000558220 ERBB3P21860 1342 aa13.12□□□□□ -0.31
SHC4-205ENST00000558220 TNRQ92752 1358 aa13.11□□□□□ -0.31
SHC4-205ENST00000558220 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.11□□□□□ -0.31
SHC4-205ENST00000558220 SOX12O15370 315 aa13.11□□□□□ -0.31
SHC4-205ENST00000558220 ZFP91Q96JP5 570 aaPredicted RBP13.11□□□□□ -0.31
SHC4-205ENST00000558220 MS4A4AQ96JQ5 239 aa13.11□□□□□ -0.31
SHC4-205ENST00000558220 POLR1AO95602 1720 aaPredicted RBP13.1□□□□□ -0.31
SHC4-205ENST00000558220 MIA2Q96PC5 1412 aa13.1□□□□□ -0.31
SHC4-205ENST00000558220 MAST1Q9Y2H9 1570 aa13.1□□□□□ -0.31
SHC4-205ENST00000558220 RIMBP2O15034 1052 aa13.09□□□□□ -0.31
SHC4-205ENST00000558220 THEMISQ8N1K5 641 aaPredicted RBP13.09□□□□□ -0.31
SHC4-205ENST00000558220 ZNF335Q9H4Z2 1342 aaPredicted RBP13.09□□□□□ -0.31
SHC4-205ENST00000558220 ZC3H13Q5T200 1668 aaKnown RBP13.08□□□□□ -0.31
SHC4-205ENST00000558220 DISP3Q9P2K9 1392 aa13.08□□□□□ -0.31
SHC4-205ENST00000558220 VGFO15240 615 aaPredicted RBP13.08□□□□□ -0.32
SHC4-205ENST00000558220 PHF8Q9UPP1 1060 aa13.08□□□□□ -0.32
SHC4-205ENST00000558220 EIF2AK4Q9P2K8 1649 aaKnown RBP13.08□□□□□ -0.32
SHC4-205ENST00000558220 NLRP1Q9C000 1473 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms