RNA–Protein interactions for RNA: ENST00000558204.5

LRRC49-208, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 559 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-208ENST00000558204 ZNF772Q68DY9 489 aaPredicted RBP12.87□□□□□ -0.35
LRRC49-208ENST00000558204 C14orf37Q86TY3 774 aa12.87□□□□□ -0.35
LRRC49-208ENST00000558204 UPF1Q92900 1129 aaKnown RBP eCLIP12.87□□□□□ -0.35
LRRC49-208ENST00000558204 NKTRP30414 1462 aaKnown RBP12.86□□□□□ -0.35
LRRC49-208ENST00000558204 ERBINQ96RT1 1412 aa12.86□□□□□ -0.35
LRRC49-208ENST00000558204 PPP1R15AO75807 674 aaPredicted RBP12.85□□□□□ -0.35
LRRC49-208ENST00000558204 TET3O43151 1660 aa12.84□□□□□ -0.35
LRRC49-208ENST00000558204 SPATA31A6Q5VVP1 1343 aa12.84□□□□□ -0.35
LRRC49-208ENST00000558204 NWD1Q149M9 1564 aa12.83□□□□□ -0.36
LRRC49-208ENST00000558204 KDM5AP29375 1690 aaKnown RBP12.83□□□□□ -0.36
LRRC49-208ENST00000558204 RXRBP28702 533 aa12.82□□□□□ -0.36
LRRC49-208ENST00000558204 KANK4Q5T7N3 995 aaPredicted RBP12.82□□□□□ -0.36
LRRC49-208ENST00000558204 ADGRB3O60242 1522 aa12.82□□□□□ -0.36
LRRC49-208ENST00000558204 LRP6O75581 1613 aa12.81□□□□□ -0.36
LRRC49-208ENST00000558204 NUTM2BA6NNL0 878 aaPredicted RBP12.81□□□□□ -0.36
LRRC49-208ENST00000558204 NUTM2EB1AL46 878 aaPredicted RBP12.81□□□□□ -0.36
LRRC49-208ENST00000558204 HDGFP51858 240 aaKnown RBP12.81□□□□□ -0.36
LRRC49-208ENST00000558204 NUTM2AQ8IVF1 878 aaPredicted RBP12.81□□□□□ -0.36
LRRC49-208ENST00000558204 COL16A1Q07092 1604 aaPredicted RBP12.8□□□□□ -0.36
LRRC49-208ENST00000558204 FGD6Q6ZV73 1430 aa12.8□□□□□ -0.36
LRRC49-208ENST00000558204 ATF3P18847 181 aa12.8□□□□□ -0.36
LRRC49-208ENST00000558204 SLC52A1Q9NWF4 448 aa12.8□□□□□ -0.36
LRRC49-208ENST00000558204 CHIC2Q9UKJ5 165 aa12.8□□□□□ -0.36
LRRC49-208ENST00000558204 ABCC5O15440 1437 aa12.79□□□□□ -0.36
LRRC49-208ENST00000558204 VPS8Q8N3P4 1428 aa12.79□□□□□ -0.36
LRRC49-208ENST00000558204 CROCC2H7BZ55 1655 aa12.79□□□□□ -0.36
LRRC49-208ENST00000558204 LMTK2Q8IWU2 1503 aa12.78□□□□□ -0.36
LRRC49-208ENST00000558204 CHGAP10645 457 aaKnown RBP12.78□□□□□ -0.36
LRRC49-208ENST00000558204 CADPS2Q86UW7 1296 aa12.78□□□□□ -0.36
LRRC49-208ENST00000558204 ANKRD30AQ9BXX3 1397 aa12.78□□□□□ -0.36
LRRC49-208ENST00000558204 PLEKHG1Q9ULL1 1385 aa12.78□□□□□ -0.36
LRRC49-208ENST00000558204 CACNB1Q02641 598 aaPredicted RBP12.77□□□□□ -0.37
LRRC49-208ENST00000558204 NOS1P29475 1434 aa12.77□□□□□ -0.37
LRRC49-208ENST00000558204 DAPK1P53355 1430 aa12.77□□□□□ -0.37
LRRC49-208ENST00000558204 CHD2O14647 1828 aaKnown RBP12.76□□□□□ -0.37
LRRC49-208ENST00000558204 C19orf44Q9H6X5 657 aa12.76□□□□□ -0.37
LRRC49-208ENST00000558204 RIMS2Q9UQ26 1411 aa12.76□□□□□ -0.37
LRRC49-208ENST00000558204 PTPN23Q9H3S7 1636 aa12.76□□□□□ -0.37
LRRC49-208ENST00000558204 APLP2Q06481 763 aa12.75□□□□□ -0.37
LRRC49-208ENST00000558204 SHPRHQ149N8 1683 aa12.75□□□□□ -0.37
LRRC49-208ENST00000558204 TBX22Q9Y458 520 aa12.75□□□□□ -0.37
LRRC49-208ENST00000558204 NCOA3Q9Y6Q9 1424 aa12.75□□□□□ -0.37
LRRC49-208ENST00000558204 AHDC1Q5TGY3 1603 aaPredicted RBP12.74□□□□□ -0.37
LRRC49-208ENST00000558204 AFF2P51816 1311 aa12.74□□□□□ -0.37
LRRC49-208ENST00000558204 NUTM2DQ5VT03 806 aaPredicted RBP12.74□□□□□ -0.37
LRRC49-208ENST00000558204 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.74□□□□□ -0.37
LRRC49-208ENST00000558204 RNF39Q9H2S5 420 aa12.74□□□□□ -0.37
LRRC49-208ENST00000558204 ZFYVE9O95405 1425 aa12.73□□□□□ -0.37
LRRC49-208ENST00000558204 CDK12Q9NYV4 1490 aaPredicted RBP12.72□□□□□ -0.37
LRRC49-208ENST00000558204 MYO5BQ9ULV0 1848 aa12.72□□□□□ -0.37
LRRC49-208ENST00000558204 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.72□□□□□ -0.37
LRRC49-208ENST00000558204 NPM3O75607 178 aaKnown RBP12.72□□□□□ -0.37
LRRC49-208ENST00000558204 C8orf37Q96NL8 207 aa12.72□□□□□ -0.37
LRRC49-208ENST00000558204 GCC2Q8IWJ2 1684 aa12.72□□□□□ -0.37
LRRC49-208ENST00000558204 BRINP3Q76B58 766 aa12.71□□□□□ -0.37
LRRC49-208ENST00000558204 QTRT2Q9H974 415 aaKnown RBP12.7□□□□□ -0.38
LRRC49-208ENST00000558204 RPRD2Q5VT52 1461 aaKnown RBP12.7□□□□□ -0.38
LRRC49-208ENST00000558204 RBM6P78332 1123 aaKnown RBP12.69□□□□□ -0.38
LRRC49-208ENST00000558204 AMOTL2Q9Y2J4 779 aa12.69□□□□□ -0.38
LRRC49-208ENST00000558204 LRRC59Q96AG4 307 aaKnown RBP12.68□□□□□ -0.38
LRRC49-208ENST00000558204 TMEM131LA2VDJ0 1609 aa12.68□□□□□ -0.38
LRRC49-208ENST00000558204 RGS12O14924 1447 aa12.68□□□□□ -0.38
LRRC49-208ENST00000558204 ADAMTS13Q76LX8 1427 aa12.68□□□□□ -0.38
LRRC49-208ENST00000558204 DIP2AQ14689 1571 aa12.68□□□□□ -0.38
LRRC49-208ENST00000558204 PIK3R4Q99570 1358 aa12.68□□□□□ -0.38
LRRC49-208ENST00000558204 TRPM2O94759 1503 aa12.67□□□□□ -0.38
LRRC49-208ENST00000558204 ANKRD50Q9ULJ7 1429 aa12.66□□□□□ -0.38
LRRC49-208ENST00000558204 LOC105371045A0A1W2PR82 267 aa12.66□□□□□ -0.38
LRRC49-208ENST00000558204 FAM50AQ14320 339 aaKnown RBP12.66□□□□□ -0.38
LRRC49-208ENST00000558204 NGLY1Q96IV0 654 aa12.66□□□□□ -0.38
LRRC49-208ENST00000558204 ASXL1Q8IXJ9 1541 aa12.66□□□□□ -0.38
LRRC49-208ENST00000558204 SETD5Q9C0A6 1442 aa12.65□□□□□ -0.38
LRRC49-208ENST00000558204 ADAMTS2O95450 1211 aa12.65□□□□□ -0.38
LRRC49-208ENST00000558204 DDX17Q92841 729 aaKnown RBP12.64□□□□□ -0.39
LRRC49-208ENST00000558204 ZRANB1Q9UGI0 708 aa12.64□□□□□ -0.39
LRRC49-208ENST00000558204 ATAD2Q6PL18 1390 aa12.64□□□□□ -0.39
LRRC49-208ENST00000558204 DCCP43146 1447 aa12.63□□□□□ -0.39
LRRC49-208ENST00000558204 C1QBPQ07021 282 aaKnown RBP12.63□□□□□ -0.39
LRRC49-208ENST00000558204 ADGRL2O95490 1459 aa12.63□□□□□ -0.39
LRRC49-208ENST00000558204 PTPRUQ92729 1446 aa12.62□□□□□ -0.39
LRRC49-208ENST00000558204 PNPLA6Q8IY17 1366 aa12.62□□□□□ -0.39
LRRC49-208ENST00000558204 MST1RQ04912 1400 aa12.62□□□□□ -0.39
LRRC49-208ENST00000558204 USP21Q9UK80 565 aa12.61□□□□□ -0.39
LRRC49-208ENST00000558204 NHSL1Q5SYE7 1610 aa12.61□□□□□ -0.39
LRRC49-208ENST00000558204 ZNF326Q5BKZ1 582 aaKnown RBP12.6□□□□□ -0.39
LRRC49-208ENST00000558204 TRPC5Q9UL62 973 aaPredicted RBP12.59□□□□□ -0.39
LRRC49-208ENST00000558204 UNC13BO14795 1591 aa12.59□□□□□ -0.39
LRRC49-208ENST00000558204 E9PCH4 1651 aa12.57□□□□□ -0.4
LRRC49-208ENST00000558204 XRN1Q8IZH2 1706 aaKnown RBP12.57□□□□□ -0.4
LRRC49-208ENST00000558204 ADGRL3Q9HAR2 1447 aa12.56□□□□□ -0.4
LRRC49-208ENST00000558204 SRCAPQ6ZRS2 3230 aa12.55□□□□□ -0.4
LRRC49-208ENST00000558204 METP08581 1390 aa12.55□□□□□ -0.4
LRRC49-208ENST00000558204 NUP155O75694 1391 aa12.54□□□□□ -0.4
LRRC49-208ENST00000558204 SETBP1Q9Y6X0 1596 aa12.53□□□□□ -0.4
LRRC49-208ENST00000558204 NRXN3Q9Y4C0 1643 aa12.53□□□□□ -0.4
LRRC49-208ENST00000558204 CCDC125Q86Z20 511 aa12.53□□□□□ -0.4
LRRC49-208ENST00000558204 C1orf167Q5SNV9 1468 aa12.53□□□□□ -0.4
LRRC49-208ENST00000558204 IQGAP3Q86VI3 1631 aa12.52□□□□□ -0.4
LRRC49-208ENST00000558204 NALCNQ8IZF0 1738 aa12.52□□□□□ -0.41
LRRC49-208ENST00000558204 ORAI2Q96SN7 254 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms