RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 GIMAP7Q8NHV1 300 aa4.48□□□□□ -1.69
ATXN3-248ENST00000558190 MCM5P33992 734 aa4.48□□□□□ -1.69
ATXN3-248ENST00000558190 RSPH14Q9UHP6 348 aa4.48□□□□□ -1.69
ATXN3-248ENST00000558190 FAM177BA6PVY3 158 aa4.48□□□□□ -1.69
ATXN3-248ENST00000558190 RRAGDQ9NQL2 400 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-248ENST00000558190 CCDC184Q52MB2 194 aa4.48□□□□□ -1.69
ATXN3-248ENST00000558190 RNF187Q5TA31 235 aaPredicted RBP4.48□□□□□ -1.69
ATXN3-248ENST00000558190 SLC4A10Q6U841 1118 aa4.48□□□□□ -1.69
ATXN3-248ENST00000558190 SKAP1Q86WV1 359 aa4.48□□□□□ -1.69
ATXN3-248ENST00000558190 MNAT1P51948 309 aa4.48□□□□□ -1.69
ATXN3-248ENST00000558190 TOMM22Q9NS69 142 aa4.48□□□□□ -1.69
ATXN3-248ENST00000558190 BMS1Q14692 1282 aaKnown RBP4.48□□□□□ -1.69
ATXN3-248ENST00000558190 ZKSCAN2Q63HK3 967 aa4.48□□□□□ -1.69
ATXN3-248ENST00000558190 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.48□□□□□ -1.69
ATXN3-248ENST00000558190 RRP1P56182 461 aaKnown RBP4.48□□□□□ -1.69
ATXN3-248ENST00000558190 CCDC34Q96HJ3 373 aa4.48□□□□□ -1.69
ATXN3-248ENST00000558190 PRKRIP1Q9H875 184 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-248ENST00000558190 CLCN1P35523 988 aa4.47□□□□□ -1.69
ATXN3-248ENST00000558190 SMC3Q9UQE7 1217 aa4.47□□□□□ -1.69
ATXN3-248ENST00000558190 SYNE3Q6ZMZ3 975 aa4.47□□□□□ -1.69
ATXN3-248ENST00000558190 NAT10Q9H0A0 1025 aaKnown RBP4.47□□□□□ -1.69
ATXN3-248ENST00000558190 WWC1Q8IX03 1113 aa4.47□□□□□ -1.69
ATXN3-248ENST00000558190 PCMTD1Q96MG8 357 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-248ENST00000558190 BANK1Q8NDB2 785 aa4.47□□□□□ -1.69
ATXN3-248ENST00000558190 REC8O95072 547 aa4.47□□□□□ -1.69
ATXN3-248ENST00000558190 CCDC94Q9BW85 323 aaPredicted RBP4.47□□□□□ -1.69
ATXN3-248ENST00000558190 KDM4AO75164 1064 aa4.47□□□□□ -1.69
ATXN3-248ENST00000558190 PES1O00541 588 aaKnown RBP4.46□□□□□ -1.69
ATXN3-248ENST00000558190 TTLL5Q6EMB2 1281 aa4.46□□□□□ -1.69
ATXN3-248ENST00000558190 DYDC1Q8WWB3 177 aa4.46□□□□□ -1.7
ATXN3-248ENST00000558190 CDR1P51861 262 aa4.46□□□□□ -1.7
ATXN3-248ENST00000558190 SMC4Q9NTJ3 1288 aa4.46□□□□□ -1.7
ATXN3-248ENST00000558190 HMMRO75330 724 aa4.46□□□□□ -1.7
ATXN3-248ENST00000558190 KIF18AQ8NI77 898 aa4.46□□□□□ -1.7
ATXN3-248ENST00000558190 ODF2Q5BJF6 829 aa4.46□□□□□ -1.7
ATXN3-248ENST00000558190 DZIP1LQ8IYY4 767 aaKnown RBP4.46□□□□□ -1.7
ATXN3-248ENST00000558190 PAXBP1Q9Y5B6 917 aa4.46□□□□□ -1.7
ATXN3-248ENST00000558190 CAMK4Q16566 473 aa4.46□□□□□ -1.7
ATXN3-248ENST00000558190 CCDC27Q2M243 656 aa4.46□□□□□ -1.7
ATXN3-248ENST00000558190 HSP90B1P14625 803 aaKnown RBP4.46□□□□□ -1.7
ATXN3-248ENST00000558190 FAM193AP78312 1265 aa4.46□□□□□ -1.7
ATXN3-248ENST00000558190 CCDC9Q9Y3X0 531 aaKnown RBP4.46□□□□□ -1.7
ATXN3-248ENST00000558190 LEKR1Q6ZMV7 388 aa4.46□□□□□ -1.7
ATXN3-248ENST00000558190 CHMP4CQ96CF2 233 aa4.46□□□□□ -1.7
ATXN3-248ENST00000558190 FAM184AQ8NB25 1140 aa4.46□□□□□ -1.7
ATXN3-248ENST00000558190 TSPYL1Q9H0U9 437 aa4.46□□□□□ -1.7
ATXN3-248ENST00000558190 MARCH6O60337 910 aa4.46□□□□□ -1.7
ATXN3-248ENST00000558190 TMF1P82094 1093 aa4.46□□□□□ -1.7
ATXN3-248ENST00000558190 LARP1BQ659C4 914 aaKnown RBP4.46□□□□□ -1.7
ATXN3-248ENST00000558190 GON4LQ3T8J9 2241 aa4.46□□□□□ -1.7
ATXN3-248ENST00000558190 ADCY5O95622 1261 aa4.45□□□□□ -1.7
ATXN3-248ENST00000558190 TNNT1P13805 278 aa4.45□□□□□ -1.7
ATXN3-248ENST00000558190 BCL2L13Q9BXK5 485 aa4.45□□□□□ -1.7
ATXN3-248ENST00000558190 LNPKQ9C0E8 428 aa4.45□□□□□ -1.7
ATXN3-248ENST00000558190 TFIP11Q9UBB9 837 aaKnown RBP4.45□□□□□ -1.7
ATXN3-248ENST00000558190 CT47B1P0C2W7 299 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-248ENST00000558190 CEBPZQ03701 1054 aaKnown RBP4.45□□□□□ -1.7
ATXN3-248ENST00000558190 ZBTB9Q96C00 473 aa4.45□□□□□ -1.7
ATXN3-248ENST00000558190 CCDC180Q9P1Z9 1646 aa4.45□□□□□ -1.7
ATXN3-248ENST00000558190 PPFIBP1Q86W92 1011 aa4.45□□□□□ -1.7
ATXN3-248ENST00000558190 UVSSAQ2YD98 709 aa4.45□□□□□ -1.7
ATXN3-248ENST00000558190 HAP1P54257 671 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-248ENST00000558190 ACBD3Q9H3P7 528 aa4.45□□□□□ -1.7
ATXN3-248ENST00000558190 SMC2O95347 1197 aa4.45□□□□□ -1.7
ATXN3-248ENST00000558190 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.45□□□□□ -1.7
ATXN3-248ENST00000558190 PLEKHD1A6NEE1 506 aa4.45□□□□□ -1.7
ATXN3-248ENST00000558190 MEX3CQ5U5Q3 659 aaKnown RBP4.45□□□□□ -1.7
ATXN3-248ENST00000558190 STK26Q9P289 416 aa4.45□□□□□ -1.7
ATXN3-248ENST00000558190 RTF1Q92541 710 aaKnown RBP4.45□□□□□ -1.7
ATXN3-248ENST00000558190 TBC1D2Q9BYX2 928 aa4.44□□□□□ -1.7
ATXN3-248ENST00000558190 ST20-MTHFSA0A0A6YYL1 179 aa4.44□□□□□ -1.7
ATXN3-248ENST00000558190 PTPN14Q15678 1187 aa4.44□□□□□ -1.7
ATXN3-248ENST00000558190 SMAP1Q8IYB5 467 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-248ENST00000558190 FAM177A1Q8N128 213 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-248ENST00000558190 ISY1Q9ULR0 285 aaKnown RBP4.44□□□□□ -1.7
ATXN3-248ENST00000558190 BCAR3O75815 825 aa4.44□□□□□ -1.7
ATXN3-248ENST00000558190 SLC26A8Q96RN1 970 aa4.44□□□□□ -1.7
ATXN3-248ENST00000558190 DRC1Q96MC2 740 aa4.44□□□□□ -1.7
ATXN3-248ENST00000558190 CCDC192P0DO97 292 aa4.44□□□□□ -1.7
ATXN3-248ENST00000558190 KIF16BQ96L93 1317 aa4.44□□□□□ -1.7
ATXN3-248ENST00000558190 PKD2Q13563 968 aa4.44□□□□□ -1.7
ATXN3-248ENST00000558190 CT47A1Q5JQC4 288 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-248ENST00000558190 DNAAF4Q8WXU2 420 aa4.44□□□□□ -1.7
ATXN3-248ENST00000558190 KIAA0754O94854 1291 aa4.44□□□□□ -1.7
ATXN3-248ENST00000558190 URI1O94763 535 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-248ENST00000558190 CPSF2Q9P2I0 782 aaKnown RBP4.44□□□□□ -1.7
ATXN3-248ENST00000558190 ATP2B1P20020 1258 aa4.44□□□□□ -1.7
ATXN3-248ENST00000558190 C14orf37Q86TY3 774 aa4.44□□□□□ -1.7
ATXN3-248ENST00000558190 HDAC5Q9UQL6 1122 aa4.44□□□□□ -1.7
ATXN3-248ENST00000558190 ZKSCAN1P17029 563 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-248ENST00000558190 OLFM4Q6UX06 510 aa4.44□□□□□ -1.7
ATXN3-248ENST00000558190 NOB1Q9ULX3 412 aaKnown RBP4.44□□□□□ -1.7
ATXN3-248ENST00000558190 TSC1Q92574 1164 aa4.44□□□□□ -1.7
ATXN3-248ENST00000558190 CASQ1P31415 396 aa4.43□□□□□ -1.7
ATXN3-248ENST00000558190 WASHC2AQ641Q2 1341 aa4.43□□□□□ -1.7
ATXN3-248ENST00000558190 HOOK1Q9UJC3 728 aaKnown RBP4.43□□□□□ -1.7
ATXN3-248ENST00000558190 TMCO3Q6UWJ1 677 aa4.43□□□□□ -1.7
ATXN3-248ENST00000558190 IGHDP01880 384 aa4.43□□□□□ -1.7
ATXN3-248ENST00000558190 RABEP1Q15276 862 aa4.43□□□□□ -1.7
ATXN3-248ENST00000558190 TNPO1Q92973 898 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms