RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 SPATA31D1Q6ZQQ2 1576 aa28.59■■■□□ 2.17
SNRPA1-205ENST00000558036 CFAP70Q5T0N1 1121 aa28.57■■■□□ 2.16
SNRPA1-205ENST00000558036 RPGRIP1LQ68CZ1 1315 aa28.56■■■□□ 2.16
SNRPA1-205ENST00000558036 CCDC7Q96M83 1385 aa28.55■■■□□ 2.16
SNRPA1-205ENST00000558036 TMEM131LA2VDJ0 1609 aa28.55■■■□□ 2.16
SNRPA1-205ENST00000558036 NRXN1Q9ULB1 1477 aa28.55■■■□□ 2.16
SNRPA1-205ENST00000558036 KIF7Q2M1P5 1343 aa28.54■■■□□ 2.16
SNRPA1-205ENST00000558036 PPLO60437 1756 aa28.54■■■□□ 2.16
SNRPA1-205ENST00000558036 CEBPAP49715 358 aaPredicted RBP28.54■■■□□ 2.16
SNRPA1-205ENST00000558036 STAG3Q9UJ98 1225 aa28.54■■■□□ 2.16
SNRPA1-205ENST00000558036 SENP3Q9H4L4 574 aaPredicted RBP28.52■■■□□ 2.16
SNRPA1-205ENST00000558036 NEXMIFQ5QGS0 1516 aa28.52■■■□□ 2.16
SNRPA1-205ENST00000558036 LAMC1P11047 1609 aa28.52■■■□□ 2.16
SNRPA1-205ENST00000558036 PLPPR3Q6T4P5 718 aa28.52■■■□□ 2.16
SNRPA1-205ENST00000558036 MYO5BQ9ULV0 1848 aa28.51■■■□□ 2.15
SNRPA1-205ENST00000558036 PIK3C2GO75747 1445 aa28.49■■■□□ 2.15
SNRPA1-205ENST00000558036 POLR3GLQ9BT43 218 aa28.49■■■□□ 2.15
SNRPA1-205ENST00000558036 VGFO15240 615 aaPredicted RBP28.47■■■□□ 2.15
SNRPA1-205ENST00000558036 TNRQ92752 1358 aa28.47■■■□□ 2.15
SNRPA1-205ENST00000558036 KIAA1210Q9ULL0 1709 aa28.44■■■□□ 2.14
SNRPA1-205ENST00000558036 A2ML1A8K2U0 1454 aa28.44■■■□□ 2.14
SNRPA1-205ENST00000558036 FER1L4A9Z1Z3 1794 aa28.44■■■□□ 2.14
SNRPA1-205ENST00000558036 C14orf93Q9H972 538 aaKnown RBP28.42■■■□□ 2.14
SNRPA1-205ENST00000558036 SCAF11Q99590 1463 aaKnown RBP28.42■■■□□ 2.14
SNRPA1-205ENST00000558036 TESK2Q96S53 571 aa28.41■■■□□ 2.14
SNRPA1-205ENST00000558036 TMEM132EQ6IEE7 984 aa28.4■■■□□ 2.14
SNRPA1-205ENST00000558036 IQGAP1P46940 1657 aa28.4■■■□□ 2.14
SNRPA1-205ENST00000558036 POLR1AO95602 1720 aaPredicted RBP28.4■■■□□ 2.14
SNRPA1-205ENST00000558036 C3P01024 1663 aa28.39■■■□□ 2.14
SNRPA1-205ENST00000558036 ZFYVE9O95405 1425 aa28.38■■■□□ 2.13
SNRPA1-205ENST00000558036 DISP3Q9P2K9 1392 aa28.34■■■□□ 2.13
SNRPA1-205ENST00000558036 RIMS2Q9UQ26 1411 aa28.34■■■□□ 2.13
SNRPA1-205ENST00000558036 ADGRB1O14514 1584 aa28.33■■■□□ 2.13
SNRPA1-205ENST00000558036 SETBP1Q9Y6X0 1596 aa28.32■■■□□ 2.12
SNRPA1-205ENST00000558036 TRAK1Q9UPV9 953 aa28.31■■■□□ 2.12
SNRPA1-205ENST00000558036 EIF3AQ14152 1382 aaKnown RBP28.31■■■□□ 2.12
SNRPA1-205ENST00000558036 ANP32CO43423 234 aa28.3■■■□□ 2.12
SNRPA1-205ENST00000558036 RIMS1Q86UR5 1692 aaKnown RBP28.28■■■□□ 2.12
SNRPA1-205ENST00000558036 TMF1P82094 1093 aa28.27■■■□□ 2.12
SNRPA1-205ENST00000558036 NLRP1Q9C000 1473 aa28.27■■■□□ 2.12
SNRPA1-205ENST00000558036 UBR1Q8IWV7 1749 aa28.25■■■□□ 2.11
SNRPA1-205ENST00000558036 ASXL1Q8IXJ9 1541 aa28.23■■■□□ 2.11
SNRPA1-205ENST00000558036 TMEM2Q9UHN6 1383 aa28.23■■■□□ 2.11
SNRPA1-205ENST00000558036 ADAMTSL3P82987 1691 aa28.22■■■□□ 2.11
SNRPA1-205ENST00000558036 STK26Q9P289 416 aa28.22■■■□□ 2.11
SNRPA1-205ENST00000558036 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.21■■■□□ 2.11
SNRPA1-205ENST00000558036 ALKQ9UM73 1620 aa28.2■■■□□ 2.11
SNRPA1-205ENST00000558036 YTHDC1Q96MU7 727 aaKnown RBP28.2■■■□□ 2.1
SNRPA1-205ENST00000558036 CENPJQ9HC77 1338 aaPredicted RBP28.2■■■□□ 2.1
SNRPA1-205ENST00000558036 KDM5AP29375 1690 aaKnown RBP28.19■■■□□ 2.1
SNRPA1-205ENST00000558036 CNGB1Q14028 1251 aaPredicted RBP28.17■■■□□ 2.1
SNRPA1-205ENST00000558036 PTPRMP28827 1452 aa28.16■■■□□ 2.1
SNRPA1-205ENST00000558036 LTKP29376 864 aa28.15■■■□□ 2.1
SNRPA1-205ENST00000558036 HDGFP51858 240 aaKnown RBP28.15■■■□□ 2.1
SNRPA1-205ENST00000558036 MYO3AQ8NEV4 1616 aa28.15■■■□□ 2.1
SNRPA1-205ENST00000558036 BCANQ96GW7 911 aa28.14■■■□□ 2.1
SNRPA1-205ENST00000558036 SAFB2Q14151 953 aaKnown RBP eCLIP28.13■■■□□ 2.09
SNRPA1-205ENST00000558036 YTHDC2Q9H6S0 1430 aaKnown RBP28.13■■■□□ 2.09
SNRPA1-205ENST00000558036 NRXN3Q9Y4C0 1643 aa28.12■■■□□ 2.09
SNRPA1-205ENST00000558036 TXNDC2Q86VQ3 553 aa28.12■■■□□ 2.09
SNRPA1-205ENST00000558036 ARHGEF28Q8N1W1 1705 aaKnown RBP28.1■■■□□ 2.09
SNRPA1-205ENST00000558036 PRKRIP1Q9H875 184 aaPredicted RBP28.1■■■□□ 2.09
SNRPA1-205ENST00000558036 SBNO2Q9Y2G9 1366 aa28.09■■■□□ 2.09
SNRPA1-205ENST00000558036 CDCA8Q53HL2 280 aa28.09■■■□□ 2.09
SNRPA1-205ENST00000558036 THEMISQ8N1K5 641 aaPredicted RBP28.09■■■□□ 2.09
SNRPA1-205ENST00000558036 QRICH2Q9H0J4 1663 aa28.08■■■□□ 2.09
SNRPA1-205ENST00000558036 METP08581 1390 aa28.08■■■□□ 2.09
SNRPA1-205ENST00000558036 SETD1AO15047 1707 aaKnown RBP28.07■■■□□ 2.08
SNRPA1-205ENST00000558036 PRAM1Q96QH2 718 aa28.06■■■□□ 2.08
SNRPA1-205ENST00000558036 PANK3Q9H999 370 aa28.06■■■□□ 2.08
SNRPA1-205ENST00000558036 EID1Q9Y6B2 187 aa28.06■■■□□ 2.08
SNRPA1-205ENST00000558036 CEP170BQ9Y4F5 1589 aaPredicted RBP28.05■■■□□ 2.08
SNRPA1-205ENST00000558036 SLIT1O75093 1534 aa28.05■■■□□ 2.08
SNRPA1-205ENST00000558036 CCER2I3L3R5 266 aa28.05■■■□□ 2.08
SNRPA1-205ENST00000558036 ARHGAP23Q9P227 1491 aa28.04■■■□□ 2.08
SNRPA1-205ENST00000558036 SLC24A1O60721 1099 aa28.04■■■□□ 2.08
SNRPA1-205ENST00000558036 PLEKHG1Q9ULL1 1385 aa28.02■■■□□ 2.08
SNRPA1-205ENST00000558036 POGKQ9P215 609 aa28.02■■■□□ 2.08
SNRPA1-205ENST00000558036 ADAMTS13Q76LX8 1427 aa28.01■■■□□ 2.07
SNRPA1-205ENST00000558036 SLC26A8Q96RN1 970 aa28.01■■■□□ 2.07
SNRPA1-205ENST00000558036 PER1O15534 1290 aaPredicted RBP28■■■□□ 2.07
SNRPA1-205ENST00000558036 LRPPRCP42704 1394 aaKnown RBP28■■■□□ 2.07
SNRPA1-205ENST00000558036 WAPLQ7Z5K2 1190 aa27.98■■■□□ 2.07
SNRPA1-205ENST00000558036 MINK1Q8N4C8 1332 aaPredicted RBP27.98■■■□□ 2.07
SNRPA1-205ENST00000558036 CCDC184Q52MB2 194 aa27.97■■■□□ 2.07
SNRPA1-205ENST00000558036 MYOM1P52179 1685 aa27.96■■■□□ 2.07
SNRPA1-205ENST00000558036 TULP4Q9NRJ4 1543 aa27.96■■■□□ 2.07
SNRPA1-205ENST00000558036 ABCC11Q96J66 1382 aa27.96■■■□□ 2.07
SNRPA1-205ENST00000558036 PLEKHH1Q9ULM0 1364 aa27.96■■■□□ 2.07
SNRPA1-205ENST00000558036 EVC2Q86UK5 1308 aa27.94■■■□□ 2.06
SNRPA1-205ENST00000558036 CABP2Q9NPB3 220 aa27.93■■■□□ 2.06
SNRPA1-205ENST00000558036 DLC1Q96QB1 1528 aa27.91■■■□□ 2.06
SNRPA1-205ENST00000558036 TMC1Q8TDI8 760 aa27.91■■■□□ 2.06
SNRPA1-205ENST00000558036 ZNF142P52746 1687 aaPredicted RBP27.91■■■□□ 2.06
SNRPA1-205ENST00000558036 MED14O60244 1454 aa27.9■■■□□ 2.06
SNRPA1-205ENST00000558036 CC2D1BQ5T0F9 858 aaKnown RBP27.9■■■□□ 2.06
SNRPA1-205ENST00000558036 SLC12A5Q9H2X9 1139 aa27.89■■■□□ 2.05
SNRPA1-205ENST00000558036 SRPK2P78362 688 aaKnown RBP27.88■■■□□ 2.05
SNRPA1-205ENST00000558036 SETD1BQ9UPS6 1966 aaKnown RBP27.87■■■□□ 2.05
SNRPA1-205ENST00000558036 KNSTRNQ9Y448 316 aa27.86■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms