RNA–Protein interactions for RNA: ENST00000558014.5

SEMA6D-208, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 6,028 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-208ENST00000558014 MTMR7Q9Y216 660 aa17.03■□□□□ 0.32
SEMA6D-208ENST00000558014 DDX54Q8TDD1 881 aaKnown RBP17.02■□□□□ 0.32
SEMA6D-208ENST00000558014 KIAA2012Q0VF49 1180 aa17.02■□□□□ 0.32
SEMA6D-208ENST00000558014 AMOTL1Q8IY63 956 aa17.02■□□□□ 0.31
SEMA6D-208ENST00000558014 SLC26A8Q96RN1 970 aa17.02■□□□□ 0.31
SEMA6D-208ENST00000558014 RIPK4P57078 832 aa17.01■□□□□ 0.31
SEMA6D-208ENST00000558014 FKBP5Q13451 457 aaPredicted RBP17.01■□□□□ 0.31
SEMA6D-208ENST00000558014 FOXD4L6Q3SYB3 417 aaPredicted RBP17.01■□□□□ 0.31
SEMA6D-208ENST00000558014 FOXD4L3Q6VB84 417 aaPredicted RBP17.01■□□□□ 0.31
SEMA6D-208ENST00000558014 ANKRD45Q5TZF3 282 aa17■□□□□ 0.31
SEMA6D-208ENST00000558014 TSPYL4Q9UJ04 414 aa17■□□□□ 0.31
SEMA6D-208ENST00000558014 CFAP44Q96MT7 982 aa17■□□□□ 0.31
SEMA6D-208ENST00000558014 CCER2I3L3R5 266 aa16.99■□□□□ 0.31
SEMA6D-208ENST00000558014 RIC3Q7Z5B4 369 aa16.99■□□□□ 0.31
SEMA6D-208ENST00000558014 NOP58Q9Y2X3 529 aaKnown RBP16.99■□□□□ 0.31
SEMA6D-208ENST00000558014 CCDC27Q2M243 656 aa16.99■□□□□ 0.31
SEMA6D-208ENST00000558014 L1TD1Q5T7N2 865 aaKnown RBP16.99■□□□□ 0.31
SEMA6D-208ENST00000558014 SLC4A3P48751 1232 aa16.98■□□□□ 0.31
SEMA6D-208ENST00000558014 PES1O00541 588 aaKnown RBP16.98■□□□□ 0.31
SEMA6D-208ENST00000558014 PRG4Q92954 1404 aaPredicted RBP16.98■□□□□ 0.31
SEMA6D-208ENST00000558014 GPRASP1Q5JY77 1395 aa16.98■□□□□ 0.31
SEMA6D-208ENST00000558014 APAF1O14727 1248 aa16.98■□□□□ 0.31
SEMA6D-208ENST00000558014 AKAP17AQ02040 695 aaKnown RBP16.98■□□□□ 0.31
SEMA6D-208ENST00000558014 TOM1L2Q6ZVM7 507 aa16.97■□□□□ 0.31
SEMA6D-208ENST00000558014 DHX57Q6P158 1386 aaKnown RBP16.97■□□□□ 0.31
SEMA6D-208ENST00000558014 CHAF1AQ13111 956 aaPredicted RBP16.97■□□□□ 0.31
SEMA6D-208ENST00000558014 CNKSR2Q8WXI2 1034 aa16.97■□□□□ 0.31
SEMA6D-208ENST00000558014 KIF15Q9NS87 1388 aa16.97■□□□□ 0.31
SEMA6D-208ENST00000558014 NAP1L5Q96NT1 182 aaPredicted RBP16.97■□□□□ 0.31
SEMA6D-208ENST00000558014 NESP48681 1621 aa16.97■□□□□ 0.31
SEMA6D-208ENST00000558014 ARHGAP5Q13017 1502 aa16.97■□□□□ 0.31
SEMA6D-208ENST00000558014 NEUROD6Q96NK8 337 aa16.96■□□□□ 0.31
SEMA6D-208ENST00000558014 DDX58O95786 925 aaKnown RBP16.96■□□□□ 0.31
SEMA6D-208ENST00000558014 NOC3LQ8WTT2 800 aaKnown RBP16.95■□□□□ 0.3
SEMA6D-208ENST00000558014 IGF1RP08069 1367 aa16.95■□□□□ 0.3
SEMA6D-208ENST00000558014 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.95■□□□□ 0.3
SEMA6D-208ENST00000558014 SF3A1Q15459 793 aaKnown RBP16.95■□□□□ 0.3
SEMA6D-208ENST00000558014 KRI1Q8N9T8 703 aaKnown RBP16.95■□□□□ 0.3
SEMA6D-208ENST00000558014 THEMISQ8N1K5 641 aaPredicted RBP16.94■□□□□ 0.3
SEMA6D-208ENST00000558014 IFIT2P09913 472 aaKnown RBP16.94■□□□□ 0.3
SEMA6D-208ENST00000558014 KDM4AO75164 1064 aa16.93■□□□□ 0.3
SEMA6D-208ENST00000558014 HTATSF1O43719 755 aaKnown RBP16.93■□□□□ 0.3
SEMA6D-208ENST00000558014 KIF16BQ96L93 1317 aa16.93■□□□□ 0.3
SEMA6D-208ENST00000558014 GLIPR1L2Q4G1C9 344 aa16.92■□□□□ 0.3
SEMA6D-208ENST00000558014 USP47Q96K76 1375 aa16.92■□□□□ 0.3
SEMA6D-208ENST00000558014 SYNE3Q6ZMZ3 975 aa16.92■□□□□ 0.3
SEMA6D-208ENST00000558014 PRAM1Q96QH2 718 aa16.92■□□□□ 0.3
SEMA6D-208ENST00000558014 H3BQV1 296 aa16.92■□□□□ 0.3
SEMA6D-208ENST00000558014 IFFO2Q5TF58 517 aa16.92■□□□□ 0.3
SEMA6D-208ENST00000558014 DIAPH3Q9NSV4 1193 aa16.92■□□□□ 0.3
SEMA6D-208ENST00000558014 MYBBP1AQ9BQG0 1328 aaKnown RBP16.92■□□□□ 0.3
SEMA6D-208ENST00000558014 CFAP70Q5T0N1 1121 aa16.91■□□□□ 0.3
SEMA6D-208ENST00000558014 MCTP1Q6DN14 999 aa16.91■□□□□ 0.3
SEMA6D-208ENST00000558014 COG6Q9Y2V7 657 aa16.91■□□□□ 0.3
SEMA6D-208ENST00000558014 G3BP1Q13283 466 aaKnown RBP eCLIP16.91■□□□□ 0.3
SEMA6D-208ENST00000558014 FOSBP53539 338 aa16.91■□□□□ 0.3
SEMA6D-208ENST00000558014 ANKLE2Q86XL3 938 aa16.91■□□□□ 0.3
SEMA6D-208ENST00000558014 ADAMTS2O95450 1211 aa16.9■□□□□ 0.3
SEMA6D-208ENST00000558014 FAM184AQ8NB25 1140 aa16.9■□□□□ 0.3
SEMA6D-208ENST00000558014 PDE3BQ13370 1112 aa16.89■□□□□ 0.29
SEMA6D-208ENST00000558014 IKQ13123 557 aaPredicted RBP16.88■□□□□ 0.29
SEMA6D-208ENST00000558014 ZKSCAN2Q63HK3 967 aa16.88■□□□□ 0.29
SEMA6D-208ENST00000558014 BICDL1Q6ZP65 573 aa16.88■□□□□ 0.29
SEMA6D-208ENST00000558014 NFXL1Q6ZNB6 911 aa16.87■□□□□ 0.29
SEMA6D-208ENST00000558014 CCAR1Q8IX12 1150 aaKnown RBP16.87■□□□□ 0.29
SEMA6D-208ENST00000558014 CCDC34Q96HJ3 373 aa16.87■□□□□ 0.29
SEMA6D-208ENST00000558014 SCAPERQ9BY12 1400 aa16.87■□□□□ 0.29
SEMA6D-208ENST00000558014 PRDM11Q9NQV5 511 aa16.87■□□□□ 0.29
SEMA6D-208ENST00000558014 ZC3H6P61129 1189 aaKnown RBP16.87■□□□□ 0.29
SEMA6D-208ENST00000558014 WASHC4Q2M389 1173 aa16.86■□□□□ 0.29
SEMA6D-208ENST00000558014 FBXO3Q9UK99 471 aa16.86■□□□□ 0.29
SEMA6D-208ENST00000558014 GBP4Q96PP9 640 aa16.85■□□□□ 0.29
SEMA6D-208ENST00000558014 KIF6Q6ZMV9 814 aa16.85■□□□□ 0.29
SEMA6D-208ENST00000558014 MSNP26038 577 aaKnown RBP16.84■□□□□ 0.29
SEMA6D-208ENST00000558014 TPM4P67936 248 aa16.84■□□□□ 0.29
SEMA6D-208ENST00000558014 TPD52L1Q16890 204 aaPredicted RBP16.84■□□□□ 0.29
SEMA6D-208ENST00000558014 CEP89Q96ST8 783 aa16.84■□□□□ 0.29
SEMA6D-208ENST00000558014 ANO2Q9NQ90 1003 aa16.84■□□□□ 0.29
SEMA6D-208ENST00000558014 DNAJC5BQ9UF47 199 aa16.84■□□□□ 0.29
SEMA6D-208ENST00000558014 TATP17735 454 aaPredicted RBP16.84■□□□□ 0.29
SEMA6D-208ENST00000558014 STK11IPQ8N1F8 1099 aa16.84■□□□□ 0.29
SEMA6D-208ENST00000558014 MYOM3Q5VTT5 1437 aa16.83■□□□□ 0.29
SEMA6D-208ENST00000558014 CCDC43Q96MW1 224 aaKnown RBP16.83■□□□□ 0.28
SEMA6D-208ENST00000558014 CABP4P57796 275 aa16.83■□□□□ 0.28
SEMA6D-208ENST00000558014 ARID3AQ99856 593 aa16.83■□□□□ 0.28
SEMA6D-208ENST00000558014 E9PSI1 815 aa16.82■□□□□ 0.28
SEMA6D-208ENST00000558014 CEBPAP49715 358 aaPredicted RBP16.82■□□□□ 0.28
SEMA6D-208ENST00000558014 ST18O60284 1047 aa16.81■□□□□ 0.28
SEMA6D-208ENST00000558014 RBM5P52756 815 aaKnown RBP eCLIP16.81■□□□□ 0.28
SEMA6D-208ENST00000558014 GRIN2BQ13224 1484 aa16.81■□□□□ 0.28
SEMA6D-208ENST00000558014 TRDNQ13061 729 aa16.81■□□□□ 0.28
SEMA6D-208ENST00000558014 LRRFIP1Q32MZ4 808 aaKnown RBP16.81■□□□□ 0.28
SEMA6D-208ENST00000558014 CPLX1O14810 134 aa16.8■□□□□ 0.28
SEMA6D-208ENST00000558014 CDK19Q9BWU1 502 aa16.8■□□□□ 0.28
SEMA6D-208ENST00000558014 MYL6BP14649 208 aa16.8■□□□□ 0.28
SEMA6D-208ENST00000558014 PLEKHO1Q53GL0 409 aaPredicted RBP16.8■□□□□ 0.28
SEMA6D-208ENST00000558014 ERICH2A1L162 156 aa16.79■□□□□ 0.28
SEMA6D-208ENST00000558014 ATP2B2Q01814 1243 aa16.79■□□□□ 0.28
SEMA6D-208ENST00000558014 CABP1Q9NZU7 370 aa16.79■□□□□ 0.28
SEMA6D-208ENST00000558014 PHLDB1Q86UU1 1377 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms