RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-208ENST00000557702 ATF3P18847 181 aa15.21■□□□□ 0.03
PABPN1-208ENST00000557702 NGLY1Q96IV0 654 aa15.21■□□□□ 0.03
PABPN1-208ENST00000557702 C8orf37Q96NL8 207 aa15.2■□□□□ 0.02
PABPN1-208ENST00000557702 EFCAB6Q5THR3 1501 aa15.2■□□□□ 0.02
PABPN1-208ENST00000557702 EHBP1L1Q8N3D4 1523 aa15.2■□□□□ 0.02
PABPN1-208ENST00000557702 AHDC1Q5TGY3 1603 aaPredicted RBP15.2■□□□□ 0.02
PABPN1-208ENST00000557702 NCOA3Q9Y6Q9 1424 aa15.19■□□□□ 0.02
PABPN1-208ENST00000557702 PIK3C2BO00750 1634 aa15.19■□□□□ 0.02
PABPN1-208ENST00000557702 C19orf44Q9H6X5 657 aa15.19■□□□□ 0.02
PABPN1-208ENST00000557702 CEP152O94986 1710 aa15.19■□□□□ 0.02
PABPN1-208ENST00000557702 ARHGEF5Q12774 1597 aa15.18■□□□□ 0.02
PABPN1-208ENST00000557702 SETBP1Q9Y6X0 1596 aa15.18■□□□□ 0.02
PABPN1-208ENST00000557702 KDM5AP29375 1690 aaKnown RBP15.18■□□□□ 0.02
PABPN1-208ENST00000557702 MROH1Q8NDA8 1641 aa15.17■□□□□ 0.02
PABPN1-208ENST00000557702 EIF2AK4Q9P2K8 1649 aaKnown RBP15.17■□□□□ 0.02
PABPN1-208ENST00000557702 BRINP3Q76B58 766 aa15.16■□□□□ 0.02
PABPN1-208ENST00000557702 CCDC125Q86Z20 511 aa15.15■□□□□ 0.02
PABPN1-208ENST00000557702 LRRC59Q96AG4 307 aaKnown RBP15.14■□□□□ 0.01
PABPN1-208ENST00000557702 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.14■□□□□ 0.011e-12■□□□□ 10.7
PABPN1-208ENST00000557702 DIP2AQ14689 1571 aa15.12■□□□□ 0.01
PABPN1-208ENST00000557702 SETD5Q9C0A6 1442 aa15.12■□□□□ 0.01
PABPN1-208ENST00000557702 PPP1R15AO75807 674 aaPredicted RBP15.12■□□□□ 0.01
PABPN1-208ENST00000557702 HDGFP51858 240 aaKnown RBP15.12■□□□□ 0.01
PABPN1-208ENST00000557702 MAST1Q9Y2H9 1570 aa15.11■□□□□ 0.01
PABPN1-208ENST00000557702 CHD2O14647 1828 aaKnown RBP15.11■□□□□ 0.01
PABPN1-208ENST00000557702 TBX22Q9Y458 520 aa15.11■□□□□ 0.01
PABPN1-208ENST00000557702 PLEKHG1Q9ULL1 1385 aa15.11■□□□□ 0.01
PABPN1-208ENST00000557702 SLC52A1Q9NWF4 448 aa15.1■□□□□ 0.01
PABPN1-208ENST00000557702 DUOX2Q9NRD8 1548 aa15.1■□□□□ 0.01
PABPN1-208ENST00000557702 KANK1Q14678 1352 aa15.1■□□□□ 0.01
PABPN1-208ENST00000557702 TRPC5Q9UL62 973 aaPredicted RBP15.09■□□□□ 0.01
PABPN1-208ENST00000557702 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.09■□□□□ 0.01
PABPN1-208ENST00000557702 ADAMTS2O95450 1211 aa15.08■□□□□ 0
PABPN1-208ENST00000557702 USP21Q9UK80 565 aa15.07■□□□□ 0
PABPN1-208ENST00000557702 ADGRB3O60242 1522 aa15.06■□□□□ 0
PABPN1-208ENST00000557702 RRP7BPQ9NSQ0 103 aa15.05■□□□□ -0
PABPN1-208ENST00000557702 PNPLA6Q8IY17 1366 aa15.05■□□□□ -0
PABPN1-208ENST00000557702 KIF15Q9NS87 1388 aa15.05■□□□□ -0
PABPN1-208ENST00000557702 EP400Q96L91 3159 aa15.04■□□□□ -0
PABPN1-208ENST00000557702 ASXL1Q8IXJ9 1541 aa15.04■□□□□ -0
PABPN1-208ENST00000557702 ERBINQ96RT1 1412 aa15.04■□□□□ -0
PABPN1-208ENST00000557702 ZFYVE9O95405 1425 aa15.03■□□□□ -0
PABPN1-208ENST00000557702 NOS1P29475 1434 aa15.03■□□□□ -0
PABPN1-208ENST00000557702 RIMS2Q9UQ26 1411 aa15.03■□□□□ -0
PABPN1-208ENST00000557702 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.03■□□□□ -0
PABPN1-208ENST00000557702 PIK3R4Q99570 1358 aa15.02■□□□□ -0
PABPN1-208ENST00000557702 DDX17Q92841 729 aaKnown RBP15.02■□□□□ -0
PABPN1-208ENST00000557702 DCCP43146 1447 aa15.01□□□□□ -0.01
PABPN1-208ENST00000557702 FNBP4Q8N3X1 1017 aaPredicted RBP15.01□□□□□ -0.01
PABPN1-208ENST00000557702 AMOTL2Q9Y2J4 779 aa15.01□□□□□ -0.01
PABPN1-208ENST00000557702 LMTK2Q8IWU2 1503 aa15□□□□□ -0.01
PABPN1-208ENST00000557702 MYOM3Q5VTT5 1437 aa14.99□□□□□ -0.01
PABPN1-208ENST00000557702 ATRNO75882 1429 aa14.98□□□□□ -0.01
PABPN1-208ENST00000557702 MST1RQ04912 1400 aa14.98□□□□□ -0.01
PABPN1-208ENST00000557702 ADAMTS13Q76LX8 1427 aa14.98□□□□□ -0.01
PABPN1-208ENST00000557702 NHSL1Q5SYE7 1610 aa14.97□□□□□ -0.01
PABPN1-208ENST00000557702 LRP5O75197 1615 aa14.96□□□□□ -0.01
PABPN1-208ENST00000557702 BLMP54132 1417 aaPredicted RBP14.96□□□□□ -0.01
PABPN1-208ENST00000557702 SF3B2Q13435 895 aaKnown RBP14.96□□□□□ -0.01
PABPN1-208ENST00000557702 DEFB132Q7Z7B7 95 aa14.96□□□□□ -0.01
PABPN1-208ENST00000557702 CHGAP10645 457 aaKnown RBP14.95□□□□□ -0.02
PABPN1-208ENST00000557702 PTCH1Q13635 1447 aa14.94□□□□□ -0.02
PABPN1-208ENST00000557702 GJD4Q96KN9 370 aaPredicted RBP14.94□□□□□ -0.02
PABPN1-208ENST00000557702 PTPRUQ92729 1446 aa14.92□□□□□ -0.02
PABPN1-208ENST00000557702 HRCP23327 699 aa14.91□□□□□ -0.02
PABPN1-208ENST00000557702 TRPM2O94759 1503 aa14.91□□□□□ -0.02
PABPN1-208ENST00000557702 MYO5BQ9ULV0 1848 aa14.9□□□□□ -0.02
PABPN1-208ENST00000557702 ABCC5O15440 1437 aa14.9□□□□□ -0.02
PABPN1-208ENST00000557702 SOS2Q07890 1332 aaPredicted RBP14.9□□□□□ -0.02
PABPN1-208ENST00000557702 RPRD2Q5VT52 1461 aaKnown RBP14.89□□□□□ -0.03
PABPN1-208ENST00000557702 TMEM131LA2VDJ0 1609 aa14.89□□□□□ -0.03
PABPN1-208ENST00000557702 PSDA5PKW4 1024 aaPredicted RBP14.89□□□□□ -0.03
PABPN1-208ENST00000557702 YY1P25490 414 aa14.89□□□□□ -0.03
PABPN1-208ENST00000557702 BCL9LQ86UU0 1499 aa14.88□□□□□ -0.03
PABPN1-208ENST00000557702 ANKRD30AQ9BXX3 1397 aa14.87□□□□□ -0.03
PABPN1-208ENST00000557702 GCC2Q8IWJ2 1684 aa14.87□□□□□ -0.03
PABPN1-208ENST00000557702 CHIC2Q9UKJ5 165 aa14.86□□□□□ -0.03
PABPN1-208ENST00000557702 ADGRL3Q9HAR2 1447 aa14.84□□□□□ -0.03
PABPN1-208ENST00000557702 C1orf167Q5SNV9 1468 aa14.84□□□□□ -0.03
PABPN1-208ENST00000557702 ORAI2Q96SN7 254 aa14.84□□□□□ -0.03
PABPN1-208ENST00000557702 UNC5CLQ8IV45 518 aa14.83□□□□□ -0.04
PABPN1-208ENST00000557702 BAG6P46379 1132 aa14.82□□□□□ -0.04
PABPN1-208ENST00000557702 KANK4Q5T7N3 995 aaPredicted RBP14.82□□□□□ -0.04
PABPN1-208ENST00000557702 DAPK1P53355 1430 aa14.82□□□□□ -0.04
PABPN1-208ENST00000557702 SEPT12Q8IYM1 358 aa14.81□□□□□ -0.04
PABPN1-208ENST00000557702 CROCC2H7BZ55 1655 aa14.81□□□□□ -0.04
PABPN1-208ENST00000557702 XRN1Q8IZH2 1706 aaKnown RBP14.8□□□□□ -0.04
PABPN1-208ENST00000557702 MYOM2P54296 1465 aa14.8□□□□□ -0.04
PABPN1-208ENST00000557702 RALGAPBQ86X10 1494 aa14.8□□□□□ -0.04
PABPN1-208ENST00000557702 UNC13BO14795 1591 aa14.8□□□□□ -0.04
PABPN1-208ENST00000557702 METP08581 1390 aa14.79□□□□□ -0.04
PABPN1-208ENST00000557702 LAMC1P11047 1609 aa14.79□□□□□ -0.04
PABPN1-208ENST00000557702 IFFO2Q5TF58 517 aa14.78□□□□□ -0.04
PABPN1-208ENST00000557702 KRT27Q7Z3Y8 459 aa14.78□□□□□ -0.04
PABPN1-208ENST00000557702 COL22A1Q8NFW1 1626 aaPredicted RBP14.77□□□□□ -0.04
PABPN1-208ENST00000557702 R3HDM1Q15032 1099 aaKnown RBP14.77□□□□□ -0.05
PABPN1-208ENST00000557702 NPHP3Q7Z494 1330 aa14.76□□□□□ -0.05
PABPN1-208ENST00000557702 GLI3P10071 1580 aa14.75□□□□□ -0.05
PABPN1-208ENST00000557702 SPHKAPQ2M3C7 1700 aa14.75□□□□□ -0.05
PABPN1-208ENST00000557702 PTPN23Q9H3S7 1636 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms