RNA–Protein interactions for RNA: ENST00000557493.1

TGFB3-207, Transcript of transforming growth factor beta 3, humanhuman

TSL 4

Gene TGFB3, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-207ENST00000557493 EFCAB6Q5THR3 1501 aa15.35■□□□□ 0.05
TGFB3-207ENST00000557493 SIN3AQ96ST3 1273 aa15.35■□□□□ 0.05
TGFB3-207ENST00000557493 E9PCH4 1651 aa15.35■□□□□ 0.05
TGFB3-207ENST00000557493 CEP152O94986 1710 aa15.34■□□□□ 0.05
TGFB3-207ENST00000557493 SCAF11Q99590 1463 aaKnown RBP15.34■□□□□ 0.05
TGFB3-207ENST00000557493 NEUROD1Q13562 356 aa15.34■□□□□ 0.05
TGFB3-207ENST00000557493 FOXD1Q16676 465 aa15.33■□□□□ 0.04
TGFB3-207ENST00000557493 SPHKAPQ2M3C7 1700 aa15.32■□□□□ 0.04
TGFB3-207ENST00000557493 ABCC3O15438 1527 aa15.32■□□□□ 0.04
TGFB3-207ENST00000557493 ERVK-7P63135 1459 aa15.31■□□□□ 0.04
TGFB3-207ENST00000557493 TRPM2O94759 1503 aa15.3■□□□□ 0.04
TGFB3-207ENST00000557493 TXNDC2Q86VQ3 553 aa15.3■□□□□ 0.04
TGFB3-207ENST00000557493 CCDC144AA2RUR9 1427 aa15.29■□□□□ 0.04
TGFB3-207ENST00000557493 LTKP29376 864 aa15.29■□□□□ 0.04
TGFB3-207ENST00000557493 TMEM94Q12767 1356 aa15.28■□□□□ 0.04
TGFB3-207ENST00000557493 EID1Q9Y6B2 187 aa15.28■□□□□ 0.04
TGFB3-207ENST00000557493 SETD1AO15047 1707 aaKnown RBP15.28■□□□□ 0.04
TGFB3-207ENST00000557493 SLIT1O75093 1534 aa15.27■□□□□ 0.03
TGFB3-207ENST00000557493 ARHGAP23Q9P227 1491 aa15.27■□□□□ 0.03
TGFB3-207ENST00000557493 UPF1Q92900 1129 aaKnown RBP eCLIP15.26■□□□□ 0.03
TGFB3-207ENST00000557493 JCADQ9P266 1359 aa15.25■□□□□ 0.03
TGFB3-207ENST00000557493 UBR1Q8IWV7 1749 aa15.24■□□□□ 0.03
TGFB3-207ENST00000557493 ROBO1Q9Y6N7 1651 aa15.24■□□□□ 0.03
TGFB3-207ENST00000557493 ARHGAP31Q2M1Z3 1444 aa15.24■□□□□ 0.03
TGFB3-207ENST00000557493 XIRP1Q702N8 1843 aaKnown RBP15.24■□□□□ 0.03
TGFB3-207ENST00000557493 KCNA6P17658 529 aa15.23■□□□□ 0.03
TGFB3-207ENST00000557493 CLTCL1P53675 1640 aa15.22■□□□□ 0.03
TGFB3-207ENST00000557493 PROSER2Q86WR7 435 aaPredicted RBP15.22■□□□□ 0.03
TGFB3-207ENST00000557493 ZNF772Q68DY9 489 aaPredicted RBP15.21■□□□□ 0.03
TGFB3-207ENST00000557493 PPP1R15AO75807 674 aaPredicted RBP15.2■□□□□ 0.02
TGFB3-207ENST00000557493 TMEM2Q9UHN6 1383 aa15.2■□□□□ 0.02
TGFB3-207ENST00000557493 MSH6P52701 1360 aa15.19■□□□□ 0.02
TGFB3-207ENST00000557493 MEX3CQ5U5Q3 659 aaKnown RBP15.18■□□□□ 0.02
TGFB3-207ENST00000557493 RBM33Q96EV2 1170 aaKnown RBP15.18■□□□□ 0.02
TGFB3-207ENST00000557493 STAG3Q9UJ98 1225 aa15.18■□□□□ 0.02
TGFB3-207ENST00000557493 SRCAPQ6ZRS2 3230 aa15.18■□□□□ 0.02
TGFB3-207ENST00000557493 KIF1BO60333 1816 aa15.17■□□□□ 0.02
TGFB3-207ENST00000557493 L3MBTL2Q969R5 705 aa15.17■□□□□ 0.02
TGFB3-207ENST00000557493 SLAIN2Q9P270 581 aa15.17■□□□□ 0.02
TGFB3-207ENST00000557493 NOS1P29475 1434 aa15.17■□□□□ 0.02
TGFB3-207ENST00000557493 SPATA31A6Q5VVP1 1343 aa15.17■□□□□ 0.02
TGFB3-207ENST00000557493 NKTRP30414 1462 aaKnown RBP15.16■□□□□ 0.02
TGFB3-207ENST00000557493 SLC26A8Q96RN1 970 aa15.16■□□□□ 0.02
TGFB3-207ENST00000557493 PIK3C2BO00750 1634 aa15.15■□□□□ 0.02
TGFB3-207ENST00000557493 SPATA31E1Q6ZUB1 1445 aa15.15■□□□□ 0.02
TGFB3-207ENST00000557493 PHLPP1O60346 1717 aa15.14■□□□□ 0.01
TGFB3-207ENST00000557493 LRP6O75581 1613 aa15.14■□□□□ 0.01
TGFB3-207ENST00000557493 ADGRB3O60242 1522 aa15.13■□□□□ 0.01
TGFB3-207ENST00000557493 RXRBP28702 533 aa15.13■□□□□ 0.01
TGFB3-207ENST00000557493 NWD1Q149M9 1564 aa15.11■□□□□ 0.01
TGFB3-207ENST00000557493 COL16A1Q07092 1604 aaPredicted RBP15.1■□□□□ 0.01
TGFB3-207ENST00000557493 CFAP65Q6ZU64 1925 aaKnown RBP15.1■□□□□ 0.01
TGFB3-207ENST00000557493 CDK12Q9NYV4 1490 aaPredicted RBP15.1■□□□□ 0.01
TGFB3-207ENST00000557493 RALGAPBQ86X10 1494 aa15.09■□□□□ 0.01
TGFB3-207ENST00000557493 BCANQ96GW7 911 aa15.09■□□□□ 0.01
TGFB3-207ENST00000557493 IFT172Q9UG01 1749 aa15.09■□□□□ 0.01
TGFB3-207ENST00000557493 ZNF316A6NFI3 1004 aaPredicted RBP15.08■□□□□ 0
TGFB3-207ENST00000557493 STAC3Q96MF2 364 aa15.08■□□□□ 0
TGFB3-207ENST00000557493 MYOM2P54296 1465 aa15.08■□□□□ 0
TGFB3-207ENST00000557493 IDI1Q13907 227 aa15.07■□□□□ 0
TGFB3-207ENST00000557493 DCAF11Q8TEB1 546 aa15.07■□□□□ 0
TGFB3-207ENST00000557493 PRAG1Q86YV5 1406 aa15.07■□□□□ 0
TGFB3-207ENST00000557493 SLC52A1Q9NWF4 448 aa15.06■□□□□ 0
TGFB3-207ENST00000557493 TRPM1Q7Z4N2 1603 aa15.06■□□□□ 0
TGFB3-207ENST00000557493 KDM5AP29375 1690 aaKnown RBP15.06■□□□□ 0
TGFB3-207ENST00000557493 RGL3Q3MIN7 710 aa15.05■□□□□ -0
TGFB3-207ENST00000557493 C14orf37Q86TY3 774 aa15.05■□□□□ -0
TGFB3-207ENST00000557493 PPLO60437 1756 aa15.04■□□□□ -0
TGFB3-207ENST00000557493 NCOA3Q9Y6Q9 1424 aa15.04■□□□□ -0
TGFB3-207ENST00000557493 NBPF8Q3BBV2 869 aa15.04■□□□□ -0
TGFB3-207ENST00000557493 LAMC1P11047 1609 aa15.03■□□□□ -0
TGFB3-207ENST00000557493 AHDC1Q5TGY3 1603 aaPredicted RBP15.03■□□□□ -0
TGFB3-207ENST00000557493 CADPS2Q86UW7 1296 aa15.03■□□□□ -0
TGFB3-207ENST00000557493 TMEM131LA2VDJ0 1609 aa15.03■□□□□ -0
TGFB3-207ENST00000557493 AFF2P51816 1311 aa15.02■□□□□ -0
TGFB3-207ENST00000557493 NUTM2BA6NNL0 878 aaPredicted RBP15.02■□□□□ -0
TGFB3-207ENST00000557493 NUTM2EB1AL46 878 aaPredicted RBP15.02■□□□□ -0
TGFB3-207ENST00000557493 ZNF326Q5BKZ1 582 aaKnown RBP15.02■□□□□ -0
TGFB3-207ENST00000557493 NUTM2AQ8IVF1 878 aaPredicted RBP15.02■□□□□ -0
TGFB3-207ENST00000557493 KIAA1210Q9ULL0 1709 aa15.02□□□□□ -0.01
TGFB3-207ENST00000557493 SHPRHQ149N8 1683 aa15.02□□□□□ -0.01
TGFB3-207ENST00000557493 RPGRIP1LQ68CZ1 1315 aa15.01□□□□□ -0.01
TGFB3-207ENST00000557493 ATF3P18847 181 aa15.01□□□□□ -0.01
TGFB3-207ENST00000557493 KDM2AQ9Y2K7 1162 aa15.01□□□□□ -0.01
TGFB3-207ENST00000557493 PLEKHG1Q9ULL1 1385 aa15□□□□□ -0.01
TGFB3-207ENST00000557493 CHGAP10645 457 aaKnown RBP15□□□□□ -0.01
TGFB3-207ENST00000557493 NEXMIFQ5QGS0 1516 aa15□□□□□ -0.01
TGFB3-207ENST00000557493 RGS12O14924 1447 aa15□□□□□ -0.01
TGFB3-207ENST00000557493 RBM6P78332 1123 aaKnown RBP14.99□□□□□ -0.01
TGFB3-207ENST00000557493 C19orf44Q9H6X5 657 aa14.99□□□□□ -0.01
TGFB3-207ENST00000557493 NRXN1Q9ULB1 1477 aa14.99□□□□□ -0.01
TGFB3-207ENST00000557493 MYO5BQ9ULV0 1848 aa14.99□□□□□ -0.01
TGFB3-207ENST00000557493 HDGFP51858 240 aaKnown RBP14.98□□□□□ -0.01
TGFB3-207ENST00000557493 EIF4G2P78344 907 aaKnown RBP eCLIP14.98□□□□□ -0.01
TGFB3-207ENST00000557493 NUTM2DQ5VT03 806 aaPredicted RBP14.98□□□□□ -0.01
TGFB3-207ENST00000557493 ROCK2O75116 1388 aaKnown RBP14.98□□□□□ -0.01
TGFB3-207ENST00000557493 GPRASP1Q5JY77 1395 aa14.98□□□□□ -0.01
TGFB3-207ENST00000557493 TBX22Q9Y458 520 aa14.97□□□□□ -0.01
TGFB3-207ENST00000557493 BRINP3Q76B58 766 aa14.96□□□□□ -0.01
TGFB3-207ENST00000557493 QTRT2Q9H974 415 aaKnown RBP14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms