RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 PBX2P40425 430 aa9.35□□□□□ -0.91
PRPF39-212ENST00000557477 PCMTD1Q96MG8 357 aaPredicted RBP9.35□□□□□ -0.91
PRPF39-212ENST00000557477 TMEM134Q9H6X4 195 aa9.34□□□□□ -0.91
PRPF39-212ENST00000557477 KIAA1468Q9P260 1216 aa9.34□□□□□ -0.91
PRPF39-212ENST00000557477 DMRTA1Q5VZB9 504 aa9.33□□□□□ -0.92
PRPF39-212ENST00000557477 RSPH6AQ9H0K4 717 aa9.33□□□□□ -0.92
PRPF39-212ENST00000557477 ONECUT3O60422 494 aaPredicted RBP9.32□□□□□ -0.92
PRPF39-212ENST00000557477 SKIV2LQ15477 1246 aaKnown RBP9.32□□□□□ -0.92
PRPF39-212ENST00000557477 MYSM1Q5VVJ2 828 aa9.32□□□□□ -0.92
PRPF39-212ENST00000557477 POLR3EQ9NVU0 708 aa9.32□□□□□ -0.92
PRPF39-212ENST00000557477 DDX11L8A8MPP1 907 aa9.31□□□□□ -0.92
PRPF39-212ENST00000557477 CD46P15529 392 aa9.31□□□□□ -0.92
PRPF39-212ENST00000557477 PROCA1Q8NCQ7 364 aaPredicted RBP9.31□□□□□ -0.92
PRPF39-212ENST00000557477 TBC1D2Q9BYX2 928 aa9.31□□□□□ -0.92
PRPF39-212ENST00000557477 SEPT9Q9UHD8 586 aaPredicted RBP9.3□□□□□ -0.92
PRPF39-212ENST00000557477 SULF1Q8IWU6 871 aa9.29□□□□□ -0.92
PRPF39-212ENST00000557477 CLK2P49760 499 aaKnown RBP9.28□□□□□ -0.92
PRPF39-212ENST00000557477 SPIRE2Q8WWL2 714 aa9.28□□□□□ -0.92
PRPF39-212ENST00000557477 RABGEF1Q9UJ41 708 aa9.28□□□□□ -0.92
PRPF39-212ENST00000557477 SLC4A5Q9BY07 1137 aa9.27□□□□□ -0.93
PRPF39-212ENST00000557477 LSM11P83369 360 aaKnown RBP eCLIP9.26□□□□□ -0.93
PRPF39-212ENST00000557477 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.26□□□□□ -0.93
PRPF39-212ENST00000557477 LIMD1Q9UGP4 676 aa9.26□□□□□ -0.93
PRPF39-212ENST00000557477 ATP1B4Q9UN42 357 aaPredicted RBP9.26□□□□□ -0.93
PRPF39-212ENST00000557477 VPS9D1Q9Y2B5 631 aa9.26□□□□□ -0.93
PRPF39-212ENST00000557477 SUPT5HO00267 1087 aaKnown RBP9.25□□□□□ -0.93
PRPF39-212ENST00000557477 SWT1Q5T5J6 900 aaKnown RBP9.25□□□□□ -0.93
PRPF39-212ENST00000557477 RDH13Q8NBN7 331 aa9.25□□□□□ -0.93
PRPF39-212ENST00000557477 DIXDC1Q155Q3 683 aa9.24□□□□□ -0.93
PRPF39-212ENST00000557477 FBXO31Q5XUX0 539 aaPredicted RBP9.24□□□□□ -0.93
PRPF39-212ENST00000557477 ANKRD13DQ6ZTN6 518 aa9.24□□□□□ -0.93
PRPF39-212ENST00000557477 NUTM1Q86Y26 1132 aa9.23□□□□□ -0.93
PRPF39-212ENST00000557477 ZMYND15Q9H091 742 aa9.23□□□□□ -0.93
PRPF39-212ENST00000557477 MOXD2PA6NHM9 499 aa9.22□□□□□ -0.93
PRPF39-212ENST00000557477 TK2O00142 265 aa9.22□□□□□ -0.93
PRPF39-212ENST00000557477 SLC10A3P09131 477 aa9.22□□□□□ -0.93
PRPF39-212ENST00000557477 FLIIQ13045 1269 aa9.22□□□□□ -0.93
PRPF39-212ENST00000557477 FAM98CQ17RN3 349 aaKnown RBP9.22□□□□□ -0.93
PRPF39-212ENST00000557477 ADGRD1Q6QNK2 874 aa9.22□□□□□ -0.93
PRPF39-212ENST00000557477 RIC3Q7Z5B4 369 aa9.22□□□□□ -0.93
PRPF39-212ENST00000557477 NDUFV2P19404 249 aa9.21□□□□□ -0.94
PRPF39-212ENST00000557477 RSBN1LQ6PCB5 846 aaPredicted RBP9.21□□□□□ -0.94
PRPF39-212ENST00000557477 NBPF3Q9H094 633 aa9.21□□□□□ -0.94
PRPF39-212ENST00000557477 SPTLC1O15269 473 aa9.2□□□□□ -0.94
PRPF39-212ENST00000557477 MCM6Q14566 821 aa9.2□□□□□ -0.94
PRPF39-212ENST00000557477 STAC3Q96MF2 364 aa9.2□□□□□ -0.94
PRPF39-212ENST00000557477 KDM4AO75164 1064 aa9.19□□□□□ -0.94
PRPF39-212ENST00000557477 GCGRP47871 477 aa9.19□□□□□ -0.94
PRPF39-212ENST00000557477 CSPP1Q1MSJ5 1256 aa9.19□□□□□ -0.94
PRPF39-212ENST00000557477 SAMD7Q7Z3H4 446 aa9.19□□□□□ -0.94
PRPF39-212ENST00000557477 BHMG1C9JSJ3 638 aaPredicted RBP9.18□□□□□ -0.94
PRPF39-212ENST00000557477 RFC5P40937 340 aa9.18□□□□□ -0.94
PRPF39-212ENST00000557477 MRPL50Q8N5N7 158 aaKnown RBP9.18□□□□□ -0.94
PRPF39-212ENST00000557477 HDGFP51858 240 aaKnown RBP9.17□□□□□ -0.94
PRPF39-212ENST00000557477 QPCTQ16769 361 aa9.17□□□□□ -0.94
PRPF39-212ENST00000557477 LAPTM4BQ86VI4 370 aa9.17□□□□□ -0.94
PRPF39-212ENST00000557477 PCDHB15Q9Y5E8 787 aa9.17□□□□□ -0.94
PRPF39-212ENST00000557477 HOXA2O43364 376 aa9.16□□□□□ -0.94
PRPF39-212ENST00000557477 TUSC1Q2TAM9 212 aa9.16□□□□□ -0.94
PRPF39-212ENST00000557477 RSPH4AQ5TD94 716 aa9.16□□□□□ -0.94
PRPF39-212ENST00000557477 HLA-CQ95604 372 aa9.16□□□□□ -0.94
PRPF39-212ENST00000557477 RNF40O75150 1001 aa9.15□□□□□ -0.94
PRPF39-212ENST00000557477 PPP2R2DQ66LE6 453 aa9.15□□□□□ -0.94
PRPF39-212ENST00000557477 CLUAP1Q96AJ1 413 aa9.15□□□□□ -0.94
PRPF39-212ENST00000557477 ZFRQ96KR1 1074 aaKnown RBP9.15□□□□□ -0.94
PRPF39-212ENST00000557477 GOLGA8CPA6NN73 597 aa9.14□□□□□ -0.95
PRPF39-212ENST00000557477 HRO43593 1189 aa9.14□□□□□ -0.95
PRPF39-212ENST00000557477 GJA5P36382 358 aa9.14□□□□□ -0.95
PRPF39-212ENST00000557477 USP46P62068 366 aa9.14□□□□□ -0.95
PRPF39-212ENST00000557477 GUCA2AQ02747 115 aa9.14□□□□□ -0.95
PRPF39-212ENST00000557477 SLF2Q8IX21 1173 aa9.14□□□□□ -0.95
PRPF39-212ENST00000557477 CABLES1Q8TDN4 633 aa9.14□□□□□ -0.95
PRPF39-212ENST00000557477 LILRB3O75022 631 aa9.13□□□□□ -0.95
PRPF39-212ENST00000557477 CFHP08603 1231 aa9.13□□□□□ -0.95
PRPF39-212ENST00000557477 UBTFP17480 764 aaKnown RBP9.13□□□□□ -0.95
PRPF39-212ENST00000557477 SNRKQ9NRH2 765 aa9.13□□□□□ -0.95
PRPF39-212ENST00000557477 FDX1P10109 184 aa9.12□□□□□ -0.95
PRPF39-212ENST00000557477 SLC4A3P48751 1232 aa9.12□□□□□ -0.95
PRPF39-212ENST00000557477 RTL5Q5HYW3 569 aaPredicted RBP9.12□□□□□ -0.95
PRPF39-212ENST00000557477 PCDHGC3Q9UN70 934 aa9.12□□□□□ -0.95
PRPF39-212ENST00000557477 FUT2Q10981 343 aa9.11□□□□□ -0.95
PRPF39-212ENST00000557477 POM121Q96HA1 1249 aa9.11□□□□□ -0.95
PRPF39-212ENST00000557477 SPDYE5A6NIY4 337 aa9.1□□□□□ -0.95
PRPF39-212ENST00000557477 TMEM259Q4ZIN3 620 aa9.1□□□□□ -0.95
PRPF39-212ENST00000557477 BANK1Q8NDB2 785 aa9.1□□□□□ -0.95
PRPF39-212ENST00000557477 A6NJR5 290 aa9.09□□□□□ -0.95
PRPF39-212ENST00000557477 HRCP23327 699 aa9.09□□□□□ -0.95
PRPF39-212ENST00000557477 NUTM2BA6NNL0 878 aaPredicted RBP9.08□□□□□ -0.96
PRPF39-212ENST00000557477 NUTM2EB1AL46 878 aaPredicted RBP9.08□□□□□ -0.96
PRPF39-212ENST00000557477 NUTM2DQ5VT03 806 aaPredicted RBP9.08□□□□□ -0.96
PRPF39-212ENST00000557477 PRPF38BQ5VTL8 546 aaKnown RBP9.08□□□□□ -0.96
PRPF39-212ENST00000557477 NUTM2AQ8IVF1 878 aaPredicted RBP9.08□□□□□ -0.96
PRPF39-212ENST00000557477 MTMR14Q8NCE2 650 aa9.08□□□□□ -0.96
PRPF39-212ENST00000557477 ANKK1Q8NFD2 765 aa9.08□□□□□ -0.96
PRPF39-212ENST00000557477 LRCH3Q96II8 777 aa9.08□□□□□ -0.96
PRPF39-212ENST00000557477 ZBTB3Q9H5J0 574 aa9.08□□□□□ -0.96
PRPF39-212ENST00000557477 C1orf115Q9H7X2 142 aa9.08□□□□□ -0.96
PRPF39-212ENST00000557477 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.08□□□□□ -0.96
PRPF39-212ENST00000557477 AP1G2O75843 785 aa9.07□□□□□ -0.96
PRPF39-212ENST00000557477 MYT1LQ9UL68 1186 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms