RNA–Protein interactions for RNA: ENST00000557311.5

ATXN3-247, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-247ENST00000557311 EPRSP07814 1512 aaKnown RBP8.45□□□□□ -1.06
ATXN3-247ENST00000557311 HECW2Q9P2P5 1572 aa8.45□□□□□ -1.06
ATXN3-247ENST00000557311 EVI5O60447 810 aa8.45□□□□□ -1.06
ATXN3-247ENST00000557311 ZNF454Q8N9F8 522 aa8.45□□□□□ -1.06
ATXN3-247ENST00000557311 VPS9D1Q9Y2B5 631 aa8.45□□□□□ -1.06
ATXN3-247ENST00000557311 FOSBP53539 338 aa8.43□□□□□ -1.06
ATXN3-247ENST00000557311 KCNH8Q96L42 1107 aa8.43□□□□□ -1.06
ATXN3-247ENST00000557311 KDM5BQ9UGL1 1544 aa8.43□□□□□ -1.06
ATXN3-247ENST00000557311 CAMK2BQ13554 666 aa8.42□□□□□ -1.06
ATXN3-247ENST00000557311 BCL2L12Q9HB09 334 aa8.42□□□□□ -1.06
ATXN3-247ENST00000557311 ANO8Q9HCE9 1232 aaPredicted RBP8.42□□□□□ -1.06
ATXN3-247ENST00000557311 CD109Q6YHK3 1445 aa8.41□□□□□ -1.06
ATXN3-247ENST00000557311 P3H3Q8IVL6 736 aa8.41□□□□□ -1.06
ATXN3-247ENST00000557311 VSIG10Q8N0Z9 540 aa8.41□□□□□ -1.06
ATXN3-247ENST00000557311 PPRC1Q5VV67 1664 aaKnown RBP8.4□□□□□ -1.07
ATXN3-247ENST00000557311 BHMG1C9JSJ3 638 aaPredicted RBP8.39□□□□□ -1.07
ATXN3-247ENST00000557311 DISP1Q96F81 1524 aa8.39□□□□□ -1.07
ATXN3-247ENST00000557311 ZBED2Q9BTP6 218 aa8.38□□□□□ -1.07
ATXN3-247ENST00000557311 SLC4A5Q9BY07 1137 aa8.38□□□□□ -1.07
ATXN3-247ENST00000557311 ADAM33Q9BZ11 813 aa8.38□□□□□ -1.07
ATXN3-247ENST00000557311 KDM2AQ9Y2K7 1162 aa8.38□□□□□ -1.07
ATXN3-247ENST00000557311 CUL7Q14999 1698 aa8.37□□□□□ -1.07
ATXN3-247ENST00000557311 PTPN5P54829 565 aa8.37□□□□□ -1.07
ATXN3-247ENST00000557311 FAM9AQ8IZU1 332 aaPredicted RBP8.37□□□□□ -1.07
ATXN3-247ENST00000557311 KCNV2Q8TDN2 545 aa8.37□□□□□ -1.07
ATXN3-247ENST00000557311 STAC3Q96MF2 364 aa8.37□□□□□ -1.07
ATXN3-247ENST00000557311 MAGI3Q5TCQ9 1506 aa8.37□□□□□ -1.07
ATXN3-247ENST00000557311 WDR7Q9Y4E6 1490 aa8.37□□□□□ -1.07
ATXN3-247ENST00000557311 SPDYE16A6NNV3 312 aaPredicted RBP8.36□□□□□ -1.07
ATXN3-247ENST00000557311 DDX12PQ92771 950 aa8.36□□□□□ -1.07
ATXN3-247ENST00000557311 MAP3K4Q9Y6R4 1608 aa8.36□□□□□ -1.07
ATXN3-247ENST00000557311 IQGAP2Q13576 1575 aa8.35□□□□□ -1.07
ATXN3-247ENST00000557311 PTPREP23469 700 aa8.35□□□□□ -1.07
ATXN3-247ENST00000557311 PHLDB1Q86UU1 1377 aa8.35□□□□□ -1.07
ATXN3-247ENST00000557311 GRXCR2A6NFK2 248 aa8.34□□□□□ -1.07
ATXN3-247ENST00000557311 ARHGEF1Q92888 912 aaKnown RBP8.34□□□□□ -1.07
ATXN3-247ENST00000557311 ZDHHC16Q969W1 377 aa8.34□□□□□ -1.07
ATXN3-247ENST00000557311 UGGT2Q9NYU1 1516 aa8.34□□□□□ -1.08
ATXN3-247ENST00000557311 ARID4BQ4LE39 1312 aaPredicted RBP8.33□□□□□ -1.08
ATXN3-247ENST00000557311 RAPGEF3O95398 923 aa8.33□□□□□ -1.08
ATXN3-247ENST00000557311 RBM33Q96EV2 1170 aaKnown RBP8.33□□□□□ -1.08
ATXN3-247ENST00000557311 PTPRMP28827 1452 aa8.32□□□□□ -1.08
ATXN3-247ENST00000557311 RAPGEF2Q9Y4G8 1499 aa8.32□□□□□ -1.08
ATXN3-247ENST00000557311 PDIA6Q15084 440 aa8.32□□□□□ -1.08
ATXN3-247ENST00000557311 THSD4Q6ZMP0 1018 aa8.32□□□□□ -1.08
ATXN3-247ENST00000557311 ARAP3Q8WWN8 1544 aa8.31□□□□□ -1.08
ATXN3-247ENST00000557311 NBR1Q14596 966 aa8.31□□□□□ -1.08
ATXN3-247ENST00000557311 CERKQ8TCT0 537 aa8.31□□□□□ -1.08
ATXN3-247ENST00000557311 PCDHGA10Q9Y5H3 936 aa8.31□□□□□ -1.08
ATXN3-247ENST00000557311 LMTK3Q96Q04 1460 aa8.31□□□□□ -1.08
ATXN3-247ENST00000557311 ZCCHC11Q5TAX3 1644 aaKnown RBP8.3□□□□□ -1.08
ATXN3-247ENST00000557311 SLC24A1O60721 1099 aa8.29□□□□□ -1.08
ATXN3-247ENST00000557311 PHF14O94880 888 aa8.29□□□□□ -1.08
ATXN3-247ENST00000557311 COL9A1P20849 921 aa8.29□□□□□ -1.08
ATXN3-247ENST00000557311 TYW1BQ6NUM6 668 aa8.29□□□□□ -1.08
ATXN3-247ENST00000557311 MRPL50Q8N5N7 158 aaKnown RBP8.29□□□□□ -1.08
ATXN3-247ENST00000557311 WNT2BQ93097 391 aa8.29□□□□□ -1.08
ATXN3-247ENST00000557311 GOLGA3Q08378 1498 aa8.29□□□□□ -1.08
ATXN3-247ENST00000557311 ARID3CA6NKF2 412 aa8.28□□□□□ -1.08
ATXN3-247ENST00000557311 SOCS7O14512 581 aa8.28□□□□□ -1.08
ATXN3-247ENST00000557311 HSPA2P54652 639 aa8.28□□□□□ -1.08
ATXN3-247ENST00000557311 PROX2Q3B8N5 592 aa8.28□□□□□ -1.08
ATXN3-247ENST00000557311 EPAS1Q99814 870 aa8.28□□□□□ -1.08
ATXN3-247ENST00000557311 ARIH1Q9Y4X5 557 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-247ENST00000557311 MAP3K7O43318 606 aa8.27□□□□□ -1.09
ATXN3-247ENST00000557311 FBXW7Q969H0 707 aa8.27□□□□□ -1.09
ATXN3-247ENST00000557311 KIAA0556O60303 1618 aa8.27□□□□□ -1.09
ATXN3-247ENST00000557311 GOLGA8CPA6NN73 597 aa8.26□□□□□ -1.09
ATXN3-247ENST00000557311 SEMA3EO15041 775 aa8.25□□□□□ -1.09
ATXN3-247ENST00000557311 ILDR2Q71H61 639 aa8.25□□□□□ -1.09
ATXN3-247ENST00000557311 ABCA8O94911 1581 aa8.25□□□□□ -1.09
ATXN3-247ENST00000557311 ATP10BO94823 1461 aa8.25□□□□□ -1.09
ATXN3-247ENST00000557311 CFAP43Q8NDM7 1665 aa8.24□□□□□ -1.09
ATXN3-247ENST00000557311 DISP3Q9P2K9 1392 aa8.24□□□□□ -1.09
ATXN3-247ENST00000557311 PCF11O94913 1555 aaKnown RBP8.24□□□□□ -1.09
ATXN3-247ENST00000557311 PPP1R3GB7ZBB8 358 aa8.24□□□□□ -1.09
ATXN3-247ENST00000557311 IFFO2Q5TF58 517 aa8.24□□□□□ -1.09
ATXN3-247ENST00000557311 NEO1Q92859 1461 aa8.24□□□□□ -1.09
ATXN3-247ENST00000557311 KIF21BO75037 1637 aa8.23□□□□□ -1.09
ATXN3-247ENST00000557311 TULP1O00294 542 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-247ENST00000557311 MLLT3P42568 568 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-247ENST00000557311 ADAMTSL3P82987 1691 aa8.23□□□□□ -1.09
ATXN3-247ENST00000557311 PLEKHD1A6NEE1 506 aa8.22□□□□□ -1.09
ATXN3-247ENST00000557311 SMYD5Q6GMV2 418 aa8.22□□□□□ -1.09
ATXN3-247ENST00000557311 NBPF3Q9H094 633 aa8.22□□□□□ -1.09
ATXN3-247ENST00000557311 RABGEF1Q9UJ41 708 aa8.22□□□□□ -1.09
ATXN3-247ENST00000557311 POGZQ7Z3K3 1410 aa8.21□□□□□ -1.09
ATXN3-247ENST00000557311 A0A0G2JS52 829 aa8.2□□□□□ -1.1
ATXN3-247ENST00000557311 BCAMP50895 628 aa8.2□□□□□ -1.1
ATXN3-247ENST00000557311 EN1Q05925 392 aaPredicted RBP8.2□□□□□ -1.1
ATXN3-247ENST00000557311 MLECQ14165 292 aa8.2□□□□□ -1.1
ATXN3-247ENST00000557311 C6orf132Q5T0Z8 1188 aa8.2□□□□□ -1.1
ATXN3-247ENST00000557311 KIAA1468Q9P260 1216 aa8.2□□□□□ -1.1
ATXN3-247ENST00000557311 DENND4BO75064 1496 aaPredicted RBP8.19□□□□□ -1.1
ATXN3-247ENST00000557311 NUTM2FA1L443 756 aa8.19□□□□□ -1.1
ATXN3-247ENST00000557311 TSR1Q2NL82 804 aaKnown RBP8.19□□□□□ -1.1
ATXN3-247ENST00000557311 AKNAQ7Z591 1439 aa8.19□□□□□ -1.1
ATXN3-247ENST00000557311 OSBPP22059 807 aa8.18□□□□□ -1.1
ATXN3-247ENST00000557311 FHOD3Q2V2M9 1422 aa8.18□□□□□ -1.1
ATXN3-247ENST00000557311 PRXQ9BXM0 1461 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms