RNA–Protein interactions for RNA: ENST00000557266.5

RCCD1-208, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 2,110 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-208ENST00000557266 MROH1Q8NDA8 1641 aa30.26■■■□□ 2.43
RCCD1-208ENST00000557266 INSRP06213 1382 aa30.26■■■□□ 2.43
RCCD1-208ENST00000557266 KIF13AQ9H1H9 1805 aa30.25■■■□□ 2.43
RCCD1-208ENST00000557266 ZMYM4Q5VZL5 1548 aa30.25■■■□□ 2.43
RCCD1-208ENST00000557266 BLMP54132 1417 aaPredicted RBP30.25■■■□□ 2.43
RCCD1-208ENST00000557266 POGZQ7Z3K3 1410 aa30.25■■■□□ 2.43
RCCD1-208ENST00000557266 SALL2Q9Y467 1007 aaPredicted RBP30.23■■■□□ 2.43
RCCD1-208ENST00000557266 PDE3BQ13370 1112 aa30.22■■■□□ 2.43
RCCD1-208ENST00000557266 PPRC1Q5VV67 1664 aaKnown RBP30.22■■■□□ 2.43
RCCD1-208ENST00000557266 NEURL4Q96JN8 1562 aa30.22■■■□□ 2.43
RCCD1-208ENST00000557266 CCDC136Q96JN2 1154 aa30.22■■■□□ 2.43
RCCD1-208ENST00000557266 MYT1LQ9UL68 1186 aa30.2■■■□□ 2.43
RCCD1-208ENST00000557266 TSPOAP1O95153 1857 aa30.2■■■□□ 2.43
RCCD1-208ENST00000557266 KIDINS220Q9ULH0 1771 aa30.2■■■□□ 2.42
RCCD1-208ENST00000557266 RRP1P56182 461 aaKnown RBP30.19■■■□□ 2.42
RCCD1-208ENST00000557266 SYNMO15061 1565 aa30.18■■■□□ 2.42
RCCD1-208ENST00000557266 RCAN3Q9UKA8 241 aa30.17■■■□□ 2.42
RCCD1-208ENST00000557266 UGGT1Q9NYU2 1555 aa30.17■■■□□ 2.42
RCCD1-208ENST00000557266 KIAA1210Q9ULL0 1709 aa30.16■■■□□ 2.42
RCCD1-208ENST00000557266 RICTORQ6R327 1708 aa30.15■■■□□ 2.42
RCCD1-208ENST00000557266 EFCAB6Q5THR3 1501 aa30.15■■■□□ 2.42
RCCD1-208ENST00000557266 CDCA8Q53HL2 280 aa30.14■■■□□ 2.42
RCCD1-208ENST00000557266 HECW2Q9P2P5 1572 aa30.14■■■□□ 2.42
RCCD1-208ENST00000557266 KNSTRNQ9Y448 316 aa30.14■■■□□ 2.42
RCCD1-208ENST00000557266 MLH3Q9UHC1 1453 aa30.13■■■□□ 2.41
RCCD1-208ENST00000557266 AMER1Q5JTC6 1135 aaPredicted RBP30.13■■■□□ 2.41
RCCD1-208ENST00000557266 CDCA7LQ96GN5 454 aa30.13■■■□□ 2.41
RCCD1-208ENST00000557266 MYOM2P54296 1465 aa30.13■■■□□ 2.41
RCCD1-208ENST00000557266 EIF3AQ14152 1382 aaKnown RBP30.13■■■□□ 2.41
RCCD1-208ENST00000557266 MYOM1P52179 1685 aa30.1■■■□□ 2.41
RCCD1-208ENST00000557266 PPP2R1AP30153 589 aa30.09■■■□□ 2.41
RCCD1-208ENST00000557266 ABCA6Q8N139 1617 aa30.09■■■□□ 2.41
RCCD1-208ENST00000557266 LMTK2Q8IWU2 1503 aa30.07■■■□□ 2.4
RCCD1-208ENST00000557266 ASXL1Q8IXJ9 1541 aa30.06■■■□□ 2.4
RCCD1-208ENST00000557266 ADGRF5Q8IZF2 1346 aa30.06■■■□□ 2.4
RCCD1-208ENST00000557266 CFAP70Q5T0N1 1121 aa30.06■■■□□ 2.4
RCCD1-208ENST00000557266 ADAMTS8Q9UP79 889 aa30.05■■■□□ 2.4
RCCD1-208ENST00000557266 EXOC6Q8TAG9 804 aa30.05■■■□□ 2.4
RCCD1-208ENST00000557266 RAPGEF3O95398 923 aa30.04■■■□□ 2.4
RCCD1-208ENST00000557266 FRMPD1Q5SYB0 1578 aa30.04■■■□□ 2.4
RCCD1-208ENST00000557266 KIF1BO60333 1816 aa30.03■■■□□ 2.4
RCCD1-208ENST00000557266 IFT172Q9UG01 1749 aa30.03■■■□□ 2.4
RCCD1-208ENST00000557266 MROH2AA6NES4 1674 aa30.02■■■□□ 2.4
RCCD1-208ENST00000557266 KDM5AP29375 1690 aaKnown RBP30.02■■■□□ 2.4
RCCD1-208ENST00000557266 NPC1L1Q9UHC9 1359 aa30.01■■■□□ 2.39
RCCD1-208ENST00000557266 NRXN1Q9ULB1 1477 aa30.01■■■□□ 2.39
RCCD1-208ENST00000557266 ERVK-7P63135 1459 aa30■■■□□ 2.39
RCCD1-208ENST00000557266 DNAJC5Q9H3Z4 198 aa29.99■■■□□ 2.39
RCCD1-208ENST00000557266 PIK3C2GO75747 1445 aa29.99■■■□□ 2.39
RCCD1-208ENST00000557266 ADGRB3O60242 1522 aa29.97■■■□□ 2.39
RCCD1-208ENST00000557266 WDR43Q15061 677 aaKnown RBP eCLIP29.95■■■□□ 2.39
RCCD1-208ENST00000557266 DIP2CQ9Y2E4 1556 aa29.95■■■□□ 2.38
RCCD1-208ENST00000557266 SLC24A1O60721 1099 aa29.93■■■□□ 2.38
RCCD1-208ENST00000557266 PLEKHH1Q9ULM0 1364 aa29.93■■■□□ 2.38
RCCD1-208ENST00000557266 NOS1P29475 1434 aa29.92■■■□□ 2.38
RCCD1-208ENST00000557266 NPATQ14207 1427 aa29.92■■■□□ 2.38
RCCD1-208ENST00000557266 MYO3AQ8NEV4 1616 aa29.91■■■□□ 2.38
RCCD1-208ENST00000557266 PLIN1O60240 522 aa29.89■■■□□ 2.38
RCCD1-208ENST00000557266 SBNO2Q9Y2G9 1366 aa29.88■■■□□ 2.37
RCCD1-208ENST00000557266 ERICH6Q7L0X2 663 aa29.88■■■□□ 2.37
RCCD1-208ENST00000557266 ZNF521Q96K83 1311 aa29.88■■■□□ 2.37
RCCD1-208ENST00000557266 SETBP1Q9Y6X0 1596 aa29.87■■■□□ 2.37
RCCD1-208ENST00000557266 YEATS2Q9ULM3 1422 aa29.86■■■□□ 2.37
RCCD1-208ENST00000557266 CARD14Q9BXL6 1004 aa29.86■■■□□ 2.37
RCCD1-208ENST00000557266 CHGAP10645 457 aaKnown RBP29.84■■■□□ 2.37
RCCD1-208ENST00000557266 GGT6Q6P531 493 aa29.84■■■□□ 2.37
RCCD1-208ENST00000557266 DUSP27Q5VZP5 1158 aa29.83■■■□□ 2.37
RCCD1-208ENST00000557266 ABCC3O15438 1527 aa29.82■■■□□ 2.36
RCCD1-208ENST00000557266 PPLO60437 1756 aa29.81■■■□□ 2.36
RCCD1-208ENST00000557266 CENPJQ9HC77 1338 aaPredicted RBP29.81■■■□□ 2.36
RCCD1-208ENST00000557266 CRBNQ96SW2 442 aa29.8■■■□□ 2.36
RCCD1-208ENST00000557266 ADGRB1O14514 1584 aa29.78■■■□□ 2.36
RCCD1-208ENST00000557266 C14orf93Q9H972 538 aaKnown RBP29.78■■■□□ 2.36
RCCD1-208ENST00000557266 GOLGA2Q08379 1002 aa29.77■■■□□ 2.36
RCCD1-208ENST00000557266 CCDC146Q8IYE0 955 aa29.75■■■□□ 2.35
RCCD1-208ENST00000557266 REREQ9P2R6 1566 aa29.75■■■□□ 2.35
RCCD1-208ENST00000557266 CFAP65Q6ZU64 1925 aaKnown RBP29.75■■■□□ 2.35
RCCD1-208ENST00000557266 TCERG1O14776 1098 aaKnown RBP29.75■■■□□ 2.35
RCCD1-208ENST00000557266 TRAK1Q9UPV9 953 aa29.75■■■□□ 2.35
RCCD1-208ENST00000557266 C20orf194Q5TEA3 1177 aa29.74■■■□□ 2.35
RCCD1-208ENST00000557266 ZC3H13Q5T200 1668 aaKnown RBP29.73■■■□□ 2.35
RCCD1-208ENST00000557266 RPGRIP1LQ68CZ1 1315 aa29.73■■■□□ 2.35
RCCD1-208ENST00000557266 CAMSAP1Q5T5Y3 1602 aa29.72■■■□□ 2.35
RCCD1-208ENST00000557266 SLFN5Q08AF3 891 aa29.72■■■□□ 2.35
RCCD1-208ENST00000557266 NOP58Q9Y2X3 529 aaKnown RBP29.72■■■□□ 2.35
RCCD1-208ENST00000557266 QRICH2Q9H0J4 1663 aa29.71■■■□□ 2.35
RCCD1-208ENST00000557266 ARHGEF40Q8TER5 1519 aa29.7■■■□□ 2.35
RCCD1-208ENST00000557266 SIGLEC1Q9BZZ2 1709 aa29.7■■■□□ 2.34
RCCD1-208ENST00000557266 ANP32AP39687 249 aaKnown RBP29.69■■■□□ 2.34
RCCD1-208ENST00000557266 TRMT2AQ8IZ69 625 aaKnown RBP29.69■■■□□ 2.34
RCCD1-208ENST00000557266 APAF1O14727 1248 aa29.69■■■□□ 2.34
RCCD1-208ENST00000557266 TMEM132EQ6IEE7 984 aa29.69■■■□□ 2.34
RCCD1-208ENST00000557266 NSD3Q9BZ95 1437 aa29.68■■■□□ 2.34
RCCD1-208ENST00000557266 TRHP20396 242 aaPredicted RBP29.68■■■□□ 2.34
RCCD1-208ENST00000557266 PIK3C2BO00750 1634 aa29.66■■■□□ 2.34
RCCD1-208ENST00000557266 POLR3AO14802 1390 aaPredicted RBP29.66■■■□□ 2.34
RCCD1-208ENST00000557266 PAK3O75914 559 aaPredicted RBP29.65■■■□□ 2.34
RCCD1-208ENST00000557266 IPO9Q96P70 1041 aaKnown RBP29.65■■■□□ 2.34
RCCD1-208ENST00000557266 MS4A1P11836 297 aa29.65■■■□□ 2.34
RCCD1-208ENST00000557266 SPINK5Q9NQ38 1064 aaPredicted RBP29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms