RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 CCDC125Q86Z20 511 aa20.1■□□□□ 0.81
PSEN1-219ENST00000556951 NKTRP30414 1462 aaKnown RBP20.09■□□□□ 0.81
PSEN1-219ENST00000556951 DIP2AQ14689 1571 aa20.08■□□□□ 0.81
PSEN1-219ENST00000556951 NGLY1Q96IV0 654 aa20.08■□□□□ 0.81
PSEN1-219ENST00000556951 EID1Q9Y6B2 187 aa20.08■□□□□ 0.81
PSEN1-219ENST00000556951 KDM5AP29375 1690 aaKnown RBP20.07■□□□□ 0.8
PSEN1-219ENST00000556951 KANK4Q5T7N3 995 aaPredicted RBP20.07■□□□□ 0.8
PSEN1-219ENST00000556951 TMEM2Q9UHN6 1383 aa20.07■□□□□ 0.8
PSEN1-219ENST00000556951 NWD1Q149M9 1564 aa20.06■□□□□ 0.8
PSEN1-219ENST00000556951 DUOX2Q9NRD8 1548 aa20.04■□□□□ 0.8
PSEN1-219ENST00000556951 IDI1Q13907 227 aa20.04■□□□□ 0.8
PSEN1-219ENST00000556951 PIK3C2BO00750 1634 aa20.02■□□□□ 0.8
PSEN1-219ENST00000556951 SLC26A8Q96RN1 970 aa20.02■□□□□ 0.8
PSEN1-219ENST00000556951 TET3O43151 1660 aa20.02■□□□□ 0.8
PSEN1-219ENST00000556951 YY1P25490 414 aa20.01■□□□□ 0.79
PSEN1-219ENST00000556951 C8orf37Q96NL8 207 aa20.01■□□□□ 0.79
PSEN1-219ENST00000556951 MYOM3Q5VTT5 1437 aa20.01■□□□□ 0.79
PSEN1-219ENST00000556951 RRP7BPQ9NSQ0 103 aa20■□□□□ 0.79
PSEN1-219ENST00000556951 NHSL1Q5SYE7 1610 aa19.99■□□□□ 0.79
PSEN1-219ENST00000556951 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.99■□□□□ 0.792e-7■□□□□ 10.6
PSEN1-219ENST00000556951 KIF15Q9NS87 1388 aa19.98■□□□□ 0.79
PSEN1-219ENST00000556951 ABCC5O15440 1437 aa19.97■□□□□ 0.79
PSEN1-219ENST00000556951 LOC105371045A0A1W2PR82 267 aa19.97■□□□□ 0.79
PSEN1-219ENST00000556951 STAG3Q9UJ98 1225 aa19.96■□□□□ 0.79
PSEN1-219ENST00000556951 ERBINQ96RT1 1412 aa19.95■□□□□ 0.78
PSEN1-219ENST00000556951 EFCAB6Q5THR3 1501 aa19.95■□□□□ 0.78
PSEN1-219ENST00000556951 VPS8Q8N3P4 1428 aa19.94■□□□□ 0.78
PSEN1-219ENST00000556951 NOS1P29475 1434 aa19.92■□□□□ 0.78
PSEN1-219ENST00000556951 SETD5Q9C0A6 1442 aa19.92■□□□□ 0.78
PSEN1-219ENST00000556951 CHD2O14647 1828 aaKnown RBP19.91■□□□□ 0.78
PSEN1-219ENST00000556951 LMTK2Q8IWU2 1503 aa19.91■□□□□ 0.78
PSEN1-219ENST00000556951 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.9■□□□□ 0.78
PSEN1-219ENST00000556951 NCOA3Q9Y6Q9 1424 aa19.9■□□□□ 0.78
PSEN1-219ENST00000556951 KANK1Q14678 1352 aa19.89■□□□□ 0.77
PSEN1-219ENST00000556951 CADPS2Q86UW7 1296 aa19.88■□□□□ 0.77
PSEN1-219ENST00000556951 BLMP54132 1417 aaPredicted RBP19.87■□□□□ 0.77
PSEN1-219ENST00000556951 HRCP23327 699 aa19.87■□□□□ 0.77
PSEN1-219ENST00000556951 BRINP3Q76B58 766 aa19.87■□□□□ 0.77
PSEN1-219ENST00000556951 TRPC5Q9UL62 973 aaPredicted RBP19.87■□□□□ 0.77
PSEN1-219ENST00000556951 SLC52A1Q9NWF4 448 aa19.86■□□□□ 0.77
PSEN1-219ENST00000556951 DAPK1P53355 1430 aa19.85■□□□□ 0.77
PSEN1-219ENST00000556951 CROCC2H7BZ55 1655 aa19.85■□□□□ 0.77
PSEN1-219ENST00000556951 DEFB132Q7Z7B7 95 aa19.85■□□□□ 0.77
PSEN1-219ENST00000556951 CHIC2Q9UKJ5 165 aa19.85■□□□□ 0.77
PSEN1-219ENST00000556951 USP21Q9UK80 565 aa19.84■□□□□ 0.77
PSEN1-219ENST00000556951 BCL9LQ86UU0 1499 aa19.84■□□□□ 0.77
PSEN1-219ENST00000556951 ZFYVE9O95405 1425 aa19.84■□□□□ 0.77
PSEN1-219ENST00000556951 ADGRB3O60242 1522 aa19.83■□□□□ 0.77
PSEN1-219ENST00000556951 LRRC59Q96AG4 307 aaKnown RBP19.83■□□□□ 0.77
PSEN1-219ENST00000556951 PSDA5PKW4 1024 aaPredicted RBP19.82■□□□□ 0.76
PSEN1-219ENST00000556951 ATF3P18847 181 aa19.82■□□□□ 0.76
PSEN1-219ENST00000556951 BCANQ96GW7 911 aa19.82■□□□□ 0.76
PSEN1-219ENST00000556951 PTPN23Q9H3S7 1636 aa19.82■□□□□ 0.76
PSEN1-219ENST00000556951 ATRNO75882 1429 aa19.82■□□□□ 0.76
PSEN1-219ENST00000556951 PNPLA6Q8IY17 1366 aa19.82■□□□□ 0.76
PSEN1-219ENST00000556951 PLEKHG1Q9ULL1 1385 aa19.82■□□□□ 0.76
PSEN1-219ENST00000556951 C14orf37Q86TY3 774 aa19.81■□□□□ 0.76
PSEN1-219ENST00000556951 C19orf44Q9H6X5 657 aa19.81■□□□□ 0.76
PSEN1-219ENST00000556951 TBX22Q9Y458 520 aa19.81■□□□□ 0.76
PSEN1-219ENST00000556951 ADAMTS2O95450 1211 aa19.8■□□□□ 0.76
PSEN1-219ENST00000556951 ANKRD30AQ9BXX3 1397 aa19.8■□□□□ 0.76
PSEN1-219ENST00000556951 ASXL1Q8IXJ9 1541 aa19.79■□□□□ 0.76
PSEN1-219ENST00000556951 SENP3-EIF4A1A0A087X0R7 540 aa19.78■□□□□ 0.76
PSEN1-219ENST00000556951 RIMS2Q9UQ26 1411 aa19.77■□□□□ 0.76
PSEN1-219ENST00000556951 FNBP4Q8N3X1 1017 aaPredicted RBP19.77■□□□□ 0.76
PSEN1-219ENST00000556951 ADAMTS13Q76LX8 1427 aa19.75■□□□□ 0.75
PSEN1-219ENST00000556951 MYO5BQ9ULV0 1848 aa19.74■□□□□ 0.75
PSEN1-219ENST00000556951 HDGFP51858 240 aaKnown RBP19.73■□□□□ 0.75
PSEN1-219ENST00000556951 SF3B2Q13435 895 aaKnown RBP19.73■□□□□ 0.75
PSEN1-219ENST00000556951 RPRD2Q5VT52 1461 aaKnown RBP19.73■□□□□ 0.75
PSEN1-219ENST00000556951 UNC13BO14795 1591 aa19.72■□□□□ 0.75
PSEN1-219ENST00000556951 TMEM131LA2VDJ0 1609 aa19.72■□□□□ 0.75
PSEN1-219ENST00000556951 PPP1R15AO75807 674 aaPredicted RBP19.71■□□□□ 0.75
PSEN1-219ENST00000556951 ADGRL2O95490 1459 aa19.7■□□□□ 0.74
PSEN1-219ENST00000556951 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.69■□□□□ 0.74
PSEN1-219ENST00000556951 GCC2Q8IWJ2 1684 aa19.68■□□□□ 0.74
PSEN1-219ENST00000556951 SPHKAPQ2M3C7 1700 aa19.68■□□□□ 0.74
PSEN1-219ENST00000556951 PTCH1Q13635 1447 aa19.68■□□□□ 0.74
PSEN1-219ENST00000556951 PTPRUQ92729 1446 aa19.68■□□□□ 0.74
PSEN1-219ENST00000556951 BRWD3Q6RI45 1802 aa19.67■□□□□ 0.74
PSEN1-219ENST00000556951 PIK3R4Q99570 1358 aa19.67■□□□□ 0.74
PSEN1-219ENST00000556951 AMOTL2Q9Y2J4 779 aa19.66■□□□□ 0.74
PSEN1-219ENST00000556951 DCCP43146 1447 aa19.66■□□□□ 0.74
PSEN1-219ENST00000556951 ANKRD50Q9ULJ7 1429 aa19.66■□□□□ 0.74
PSEN1-219ENST00000556951 CHGAP10645 457 aaKnown RBP19.65■□□□□ 0.74
PSEN1-219ENST00000556951 DDX17Q92841 729 aaKnown RBP19.65■□□□□ 0.74
PSEN1-219ENST00000556951 GJD4Q96KN9 370 aaPredicted RBP19.65■□□□□ 0.74
PSEN1-219ENST00000556951 MST1RQ04912 1400 aa19.64■□□□□ 0.73
PSEN1-219ENST00000556951 APLP2Q06481 763 aa19.61■□□□□ 0.73
PSEN1-219ENST00000556951 C1QTNF8P60827 252 aa19.59■□□□□ 0.73
PSEN1-219ENST00000556951 R3HDM1Q15032 1099 aaKnown RBP19.59■□□□□ 0.73
PSEN1-219ENST00000556951 ZNF784Q8NCA9 323 aaPredicted RBP19.58■□□□□ 0.72
PSEN1-219ENST00000556951 CEP350Q5VT06 3117 aa19.58■□□□□ 0.72
PSEN1-219ENST00000556951 GLI3P10071 1580 aa19.57■□□□□ 0.72
PSEN1-219ENST00000556951 MARF1Q9Y4F3 1742 aaKnown RBP19.57■□□□□ 0.72
PSEN1-219ENST00000556951 BAG6P46379 1132 aa19.57■□□□□ 0.72
PSEN1-219ENST00000556951 FAM50AQ14320 339 aaKnown RBP19.57■□□□□ 0.72
PSEN1-219ENST00000556951 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.56■□□□□ 0.72
PSEN1-219ENST00000556951 E9PCH4 1651 aa19.56■□□□□ 0.72
PSEN1-219ENST00000556951 TRPM2O94759 1503 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms