RNA–Protein interactions for RNA: ENST00000556923.1

LINC00648-203, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 276 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-203ENST00000556923 KCNC4Q03721 635 aa11.84□□□□□ -0.51
LINC00648-203ENST00000556923 NECTIN2Q92692 538 aa11.84□□□□□ -0.51
LINC00648-203ENST00000556923 A0A0G2JS52 829 aa11.83□□□□□ -0.52
LINC00648-203ENST00000556923 TJAP1Q5JTD0 557 aa11.82□□□□□ -0.52
LINC00648-203ENST00000556923 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.81□□□□□ -0.52
LINC00648-203ENST00000556923 MTRQ99707 1265 aa11.81□□□□□ -0.52
LINC00648-203ENST00000556923 PHOX2BQ99453 314 aa11.79□□□□□ -0.52
LINC00648-203ENST00000556923 NLRP7Q8WX94 980 aa11.78□□□□□ -0.52
LINC00648-203ENST00000556923 SLC10A3P09131 477 aa11.77□□□□□ -0.53
LINC00648-203ENST00000556923 IL21Q9HBE4 155 aa11.77□□□□□ -0.53
LINC00648-203ENST00000556923 LMOD2Q6P5Q4 547 aa11.76□□□□□ -0.53
LINC00648-203ENST00000556923 MAP2K5Q13163 448 aa11.75□□□□□ -0.53
LINC00648-203ENST00000556923 ZNF516Q92618 1163 aa11.75□□□□□ -0.53
LINC00648-203ENST00000556923 PRR14Q9BWN1 585 aa11.75□□□□□ -0.53
LINC00648-203ENST00000556923 CFHP08603 1231 aa11.74□□□□□ -0.53
LINC00648-203ENST00000556923 COPS2P61201 443 aa11.74□□□□□ -0.53
LINC00648-203ENST00000556923 DAXXQ9UER7 740 aaPredicted RBP11.72□□□□□ -0.53
LINC00648-203ENST00000556923 PCDHB3Q9Y5E6 796 aa11.72□□□□□ -0.53
LINC00648-203ENST00000556923 IRF6O14896 467 aa11.71□□□□□ -0.53
LINC00648-203ENST00000556923 ACTN4O43707 911 aaKnown RBP11.71□□□□□ -0.53
LINC00648-203ENST00000556923 KMT5BQ4FZB7 885 aa11.71□□□□□ -0.53
LINC00648-203ENST00000556923 BLOC1S3Q6QNY0 202 aa11.7□□□□□ -0.54
LINC00648-203ENST00000556923 MINK1Q8N4C8 1332 aaPredicted RBP11.69□□□□□ -0.54
LINC00648-203ENST00000556923 RGS20O76081 388 aa11.69□□□□□ -0.54
LINC00648-203ENST00000556923 NKX2-3Q8TAU0 364 aa11.68□□□□□ -0.54
LINC00648-203ENST00000556923 CCDC102AQ96A19 550 aa11.68□□□□□ -0.54
LINC00648-203ENST00000556923 DDX11L8A8MPP1 907 aa11.67□□□□□ -0.54
LINC00648-203ENST00000556923 ZPR1O75312 459 aa11.66□□□□□ -0.54
LINC00648-203ENST00000556923 RSPH4AQ5TD94 716 aa11.66□□□□□ -0.54
LINC00648-203ENST00000556923 RDH13Q8NBN7 331 aa11.66□□□□□ -0.54
LINC00648-203ENST00000556923 ZC3H15Q8WU90 426 aaKnown RBP11.64□□□□□ -0.55
LINC00648-203ENST00000556923 PPP1R18Q6NYC8 613 aa11.63□□□□□ -0.55
LINC00648-203ENST00000556923 SULF1Q8IWU6 871 aa11.63□□□□□ -0.55
LINC00648-203ENST00000556923 ZMYND10O75800 440 aa11.62□□□□□ -0.55
LINC00648-203ENST00000556923 TLL1O43897 1013 aa11.61□□□□□ -0.55
LINC00648-203ENST00000556923 MDM2Q00987 491 aaPredicted RBP11.61□□□□□ -0.55
LINC00648-203ENST00000556923 BARGINQ6ZT62 677 aa11.61□□□□□ -0.55
LINC00648-203ENST00000556923 PUS10Q3MIT2 529 aaKnown RBP11.6□□□□□ -0.55
LINC00648-203ENST00000556923 SLC24A1O60721 1099 aa11.59□□□□□ -0.55
LINC00648-203ENST00000556923 GCGRP47871 477 aa11.59□□□□□ -0.55
LINC00648-203ENST00000556923 FUT2Q10981 343 aa11.58□□□□□ -0.56
LINC00648-203ENST00000556923 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.58□□□□□ -0.56
LINC00648-203ENST00000556923 NR1I2O75469 434 aa11.57□□□□□ -0.56
LINC00648-203ENST00000556923 CD46P15529 392 aa11.57□□□□□ -0.56
LINC00648-203ENST00000556923 KRI1Q8N9T8 703 aaKnown RBP11.57□□□□□ -0.56
LINC00648-203ENST00000556923 SCUBE3Q8IX30 993 aa11.56□□□□□ -0.56
LINC00648-203ENST00000556923 MORN1Q5T089 497 aa11.54□□□□□ -0.56
LINC00648-203ENST00000556923 TMUB1Q9BVT8 246 aa11.54□□□□□ -0.56
LINC00648-203ENST00000556923 GPCPD1Q9NPB8 672 aa11.54□□□□□ -0.56
LINC00648-203ENST00000556923 CLCN1P35523 988 aa11.53□□□□□ -0.56
LINC00648-203ENST00000556923 GGCXP38435 758 aa11.53□□□□□ -0.56
LINC00648-203ENST00000556923 ATP6V1AP38606 617 aa11.53□□□□□ -0.56
LINC00648-203ENST00000556923 ADH1BP00325 375 aa11.52□□□□□ -0.57
LINC00648-203ENST00000556923 REPIN1Q9BWE0 567 aaKnown RBP11.52□□□□□ -0.57
LINC00648-203ENST00000556923 FAM217BQ9NTX9 383 aaPredicted RBP11.51□□□□□ -0.57
LINC00648-203ENST00000556923 RNF223E7ERA6 249 aa11.5□□□□□ -0.57
LINC00648-203ENST00000556923 S1PR4O95977 384 aa11.5□□□□□ -0.57
LINC00648-203ENST00000556923 PRKD2Q9BZL6 878 aa11.5□□□□□ -0.57
LINC00648-203ENST00000556923 SLC27A5Q9Y2P5 690 aa11.5□□□□□ -0.57
LINC00648-203ENST00000556923 SPSB2Q99619 263 aa11.49□□□□□ -0.57
LINC00648-203ENST00000556923 THAP11Q96EK4 314 aa11.48□□□□□ -0.57
LINC00648-203ENST00000556923 IRX2Q9BZI1 471 aaPredicted RBP11.48□□□□□ -0.57
LINC00648-203ENST00000556923 AMHR2Q16671 573 aa11.47□□□□□ -0.57
LINC00648-203ENST00000556923 PPEF1O14829 653 aaPredicted RBP11.46□□□□□ -0.57
LINC00648-203ENST00000556923 KDM4AO75164 1064 aa11.46□□□□□ -0.57
LINC00648-203ENST00000556923 SLC6A16Q9GZN6 736 aa11.46□□□□□ -0.57
LINC00648-203ENST00000556923 TTLL12Q14166 644 aaPredicted RBP11.45□□□□□ -0.58
LINC00648-203ENST00000556923 GRIPAP1Q4V328 841 aa11.45□□□□□ -0.58
LINC00648-203ENST00000556923 V9GY48 417 aaPredicted RBP11.45□□□□□ -0.58
LINC00648-203ENST00000556923 ANKLE1Q8NAG6 615 aa11.44□□□□□ -0.58
LINC00648-203ENST00000556923 FMNL1O95466 1100 aaPredicted RBP11.43□□□□□ -0.58
LINC00648-203ENST00000556923 RNF19BQ6ZMZ0 732 aa11.43□□□□□ -0.58
LINC00648-203ENST00000556923 HLA-CQ95604 372 aa11.43□□□□□ -0.58
LINC00648-203ENST00000556923 EMID1Q96A84 441 aaPredicted RBP11.43□□□□□ -0.58
LINC00648-203ENST00000556923 SALL2Q9Y467 1007 aaPredicted RBP11.43□□□□□ -0.58
LINC00648-203ENST00000556923 TRIM66O15016 1216 aa11.42□□□□□ -0.58
LINC00648-203ENST00000556923 SSTR3P32745 418 aaPredicted RBP11.42□□□□□ -0.58
LINC00648-203ENST00000556923 BRICD5Q6PL45 260 aa11.42□□□□□ -0.58
LINC00648-203ENST00000556923 FAM160A2Q8N612 972 aaPredicted RBP11.42□□□□□ -0.58
LINC00648-203ENST00000556923 BCANQ96GW7 911 aa11.42□□□□□ -0.58
LINC00648-203ENST00000556923 AK7Q96M32 723 aa11.42□□□□□ -0.58
LINC00648-203ENST00000556923 HOXA2O43364 376 aa11.41□□□□□ -0.58
LINC00648-203ENST00000556923 USP46P62068 366 aa11.41□□□□□ -0.58
LINC00648-203ENST00000556923 GIGYF2Q6Y7W6 1299 aaKnown RBP11.41□□□□□ -0.58
LINC00648-203ENST00000556923 PARP9Q8IXQ6 854 aa11.39□□□□□ -0.59
LINC00648-203ENST00000556923 PRDM9Q9NQV7 894 aa11.39□□□□□ -0.59
LINC00648-203ENST00000556923 GUCA2AQ02747 115 aa11.38□□□□□ -0.59
LINC00648-203ENST00000556923 PLA2G2CQ5R387 149 aa11.38□□□□□ -0.59
LINC00648-203ENST00000556923 SLC24A3Q9HC58 644 aa11.38□□□□□ -0.59
LINC00648-203ENST00000556923 SLC19A1P41440 591 aa11.37□□□□□ -0.59
LINC00648-203ENST00000556923 Q3C1V9 767 aa11.37□□□□□ -0.59
LINC00648-203ENST00000556923 NUTM1Q86Y26 1132 aa11.37□□□□□ -0.59
LINC00648-203ENST00000556923 MSS51Q4VC12 460 aa11.36□□□□□ -0.59
LINC00648-203ENST00000556923 LIAT1Q6ZQX7 453 aa11.36□□□□□ -0.59
LINC00648-203ENST00000556923 SPIRE2Q8WWL2 714 aa11.34□□□□□ -0.59
LINC00648-203ENST00000556923 SPRYD7Q5W111 196 aa11.33□□□□□ -0.6
LINC00648-203ENST00000556923 FCF1Q9Y324 198 aaKnown RBP11.33□□□□□ -0.6
LINC00648-203ENST00000556923 GFRA3O60609 400 aa11.32□□□□□ -0.6
LINC00648-203ENST00000556923 MS4A1P11836 297 aa11.32□□□□□ -0.6
LINC00648-203ENST00000556923 PDE4DQ08499 809 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms