RNA–Protein interactions for RNA: ENST00000556682.5

XRCC3-216, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 4

Gene XRCC3, Length 535 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-216ENST00000556682 SLC26A8Q96RN1 970 aa16.21■□□□□ 0.19
XRCC3-216ENST00000556682 RIMS2Q9UQ26 1411 aa16.2■□□□□ 0.18
XRCC3-216ENST00000556682 KCNA6P17658 529 aa16.2■□□□□ 0.18
XRCC3-216ENST00000556682 HFM1A2PYH4 1435 aa16.19■□□□□ 0.18
XRCC3-216ENST00000556682 E9PCH4 1651 aa16.19■□□□□ 0.18
XRCC3-216ENST00000556682 LRRC7Q96NW7 1537 aa16.19■□□□□ 0.18
XRCC3-216ENST00000556682 PLEKHG1Q9ULL1 1385 aa16.18■□□□□ 0.18
XRCC3-216ENST00000556682 ZFYVE9O95405 1425 aa16.18■□□□□ 0.18
XRCC3-216ENST00000556682 PROSER2Q86WR7 435 aaPredicted RBP16.16■□□□□ 0.18
XRCC3-216ENST00000556682 SLC4A1APQ9BWU0 796 aaKnown RBP16.16■□□□□ 0.18
XRCC3-216ENST00000556682 TBX22Q9Y458 520 aa16.16■□□□□ 0.18
XRCC3-216ENST00000556682 TMEM131LA2VDJ0 1609 aa16.16■□□□□ 0.18
XRCC3-216ENST00000556682 ZNF326Q5BKZ1 582 aaKnown RBP16.15■□□□□ 0.18
XRCC3-216ENST00000556682 NUTM2DQ5VT03 806 aaPredicted RBP16.14■□□□□ 0.17
XRCC3-216ENST00000556682 ACIN1Q9UKV3 1341 aaKnown RBP16.14■□□□□ 0.17
XRCC3-216ENST00000556682 HSPA1LP34931 641 aa16.12■□□□□ 0.17
XRCC3-216ENST00000556682 TMEM94Q12767 1356 aa16.12■□□□□ 0.17
XRCC3-216ENST00000556682 STRCP1A6NGW2 1772 aa16.11■□□□□ 0.17
XRCC3-216ENST00000556682 ADRA2BP18089 450 aa16.11■□□□□ 0.17
XRCC3-216ENST00000556682 DISP3Q9P2K9 1392 aa16.11■□□□□ 0.17
XRCC3-216ENST00000556682 NKTRP30414 1462 aaKnown RBP16.09■□□□□ 0.17
XRCC3-216ENST00000556682 PIK3R4Q99570 1358 aa16.08■□□□□ 0.16
XRCC3-216ENST00000556682 SPHKAPQ2M3C7 1700 aa16.07■□□□□ 0.16
XRCC3-216ENST00000556682 MYO5BQ9ULV0 1848 aa16.07■□□□□ 0.16
XRCC3-216ENST00000556682 TRPM2O94759 1503 aa16.06■□□□□ 0.16
XRCC3-216ENST00000556682 MSH6P52701 1360 aa16.06■□□□□ 0.16
XRCC3-216ENST00000556682 RBM33Q96EV2 1170 aaKnown RBP16.06■□□□□ 0.16
XRCC3-216ENST00000556682 ADAMTS13Q76LX8 1427 aa16.05■□□□□ 0.16
XRCC3-216ENST00000556682 VGFO15240 615 aaPredicted RBP16.05■□□□□ 0.16
XRCC3-216ENST00000556682 C14orf37Q86TY3 774 aa16.05■□□□□ 0.16
XRCC3-216ENST00000556682 MPHOSPH9Q99550 1183 aa16.05■□□□□ 0.16
XRCC3-216ENST00000556682 RPGRIP1LQ68CZ1 1315 aa16.04■□□□□ 0.16
XRCC3-216ENST00000556682 DIP2AQ14689 1571 aa16.04■□□□□ 0.16
XRCC3-216ENST00000556682 NWD1Q149M9 1564 aa16.04■□□□□ 0.16
XRCC3-216ENST00000556682 NCOA3Q9Y6Q9 1424 aa16.03■□□□□ 0.16
XRCC3-216ENST00000556682 AMOTL2Q9Y2J4 779 aa16.03■□□□□ 0.16
XRCC3-216ENST00000556682 SETD5Q9C0A6 1442 aa16.02■□□□□ 0.16
XRCC3-216ENST00000556682 ALKQ9UM73 1620 aa16.02■□□□□ 0.16
XRCC3-216ENST00000556682 FAM135BQ49AJ0 1406 aa16.02■□□□□ 0.15
XRCC3-216ENST00000556682 CLTCL1P53675 1640 aa16.01■□□□□ 0.15
XRCC3-216ENST00000556682 C19orf44Q9H6X5 657 aa16■□□□□ 0.15
XRCC3-216ENST00000556682 SLAIN2Q9P270 581 aa16■□□□□ 0.15
XRCC3-216ENST00000556682 ATF3P18847 181 aa15.99■□□□□ 0.15
XRCC3-216ENST00000556682 CADPS2Q86UW7 1296 aa15.99■□□□□ 0.15
XRCC3-216ENST00000556682 CCDC144AA2RUR9 1427 aa15.99■□□□□ 0.15
XRCC3-216ENST00000556682 CHD2O14647 1828 aaKnown RBP15.98■□□□□ 0.15
XRCC3-216ENST00000556682 SETBP1Q9Y6X0 1596 aa15.97■□□□□ 0.15
XRCC3-216ENST00000556682 KIF1BO60333 1816 aa15.96■□□□□ 0.15
XRCC3-216ENST00000556682 XIRP1Q702N8 1843 aaKnown RBP15.96■□□□□ 0.15
XRCC3-216ENST00000556682 NEXMIFQ5QGS0 1516 aa15.96■□□□□ 0.15
XRCC3-216ENST00000556682 RGL3Q3MIN7 710 aa15.95■□□□□ 0.14
XRCC3-216ENST00000556682 METP08581 1390 aa15.95■□□□□ 0.14
XRCC3-216ENST00000556682 PTPRUQ92729 1446 aa15.94■□□□□ 0.14
XRCC3-216ENST00000556682 RAB3GAP2Q9H2M9 1393 aa15.94■□□□□ 0.14
XRCC3-216ENST00000556682 HRCP23327 699 aa15.92■□□□□ 0.14
XRCC3-216ENST00000556682 ANKRD30BQ9BXX2 1392 aa15.91■□□□□ 0.14
XRCC3-216ENST00000556682 ILDR2Q71H61 639 aa15.91■□□□□ 0.14
XRCC3-216ENST00000556682 NRXN3Q9Y4C0 1643 aa15.9■□□□□ 0.14
XRCC3-216ENST00000556682 DCCP43146 1447 aa15.88■□□□□ 0.13
XRCC3-216ENST00000556682 SPATA31E1Q6ZUB1 1445 aa15.88■□□□□ 0.13
XRCC3-216ENST00000556682 ROBO1Q9Y6N7 1651 aa15.88■□□□□ 0.13
XRCC3-216ENST00000556682 MED1Q15648 1581 aaPredicted RBP15.87■□□□□ 0.13
XRCC3-216ENST00000556682 ADGRF5Q8IZF2 1346 aa15.87■□□□□ 0.13
XRCC3-216ENST00000556682 XRN1Q8IZH2 1706 aaKnown RBP15.86■□□□□ 0.13
XRCC3-216ENST00000556682 PTCH1Q13635 1447 aa15.85■□□□□ 0.13
XRCC3-216ENST00000556682 ADGRL3Q9HAR2 1447 aa15.85■□□□□ 0.13
XRCC3-216ENST00000556682 SOCS7O14512 581 aa15.84■□□□□ 0.13
XRCC3-216ENST00000556682 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.84■□□□□ 0.13
XRCC3-216ENST00000556682 JCADQ9P266 1359 aa15.84■□□□□ 0.13
XRCC3-216ENST00000556682 BRINP3Q76B58 766 aa15.83■□□□□ 0.12
XRCC3-216ENST00000556682 PPLO60437 1756 aa15.82■□□□□ 0.12
XRCC3-216ENST00000556682 ROBO2Q9HCK4 1378 aa15.82■□□□□ 0.12
XRCC3-216ENST00000556682 STK26Q9P289 416 aa15.81■□□□□ 0.12
XRCC3-216ENST00000556682 MST1RQ04912 1400 aa15.8■□□□□ 0.12
XRCC3-216ENST00000556682 PRAG1Q86YV5 1406 aa15.8■□□□□ 0.12
XRCC3-216ENST00000556682 PIK3C2GO75747 1445 aa15.79■□□□□ 0.12
XRCC3-216ENST00000556682 STAC3Q96MF2 364 aa15.79■□□□□ 0.12
XRCC3-216ENST00000556682 C14orf93Q9H972 538 aaKnown RBP15.79■□□□□ 0.12
XRCC3-216ENST00000556682 LRPPRCP42704 1394 aaKnown RBP15.78■□□□□ 0.12
XRCC3-216ENST00000556682 ABCC11Q96J66 1382 aa15.78■□□□□ 0.12
XRCC3-216ENST00000556682 SPATA31A6Q5VVP1 1343 aa15.78■□□□□ 0.12
XRCC3-216ENST00000556682 PHLPP1O60346 1717 aa15.78■□□□□ 0.12
XRCC3-216ENST00000556682 TMEM132EQ6IEE7 984 aa15.78■□□□□ 0.12
XRCC3-216ENST00000556682 LRRC59Q96AG4 307 aaKnown RBP15.77■□□□□ 0.12
XRCC3-216ENST00000556682 SIRT1Q96EB6 747 aa15.76■□□□□ 0.11
XRCC3-216ENST00000556682 SETD1AO15047 1707 aaKnown RBP15.76■□□□□ 0.11
XRCC3-216ENST00000556682 AHDC1Q5TGY3 1603 aaPredicted RBP15.76■□□□□ 0.11
XRCC3-216ENST00000556682 DHX57Q6P158 1386 aaKnown RBP15.75■□□□□ 0.11
XRCC3-216ENST00000556682 CFAP70Q5T0N1 1121 aa15.75■□□□□ 0.11
XRCC3-216ENST00000556682 PIAS4Q8N2W9 510 aaPredicted RBP15.75■□□□□ 0.11
XRCC3-216ENST00000556682 TECPR2O15040 1411 aa15.75■□□□□ 0.11
XRCC3-216ENST00000556682 ASXL1Q8IXJ9 1541 aa15.74■□□□□ 0.11
XRCC3-216ENST00000556682 MYOM2P54296 1465 aa15.74■□□□□ 0.11
XRCC3-216ENST00000556682 C1orf167Q5SNV9 1468 aa15.74■□□□□ 0.11
XRCC3-216ENST00000556682 MEX3CQ5U5Q3 659 aaKnown RBP15.74■□□□□ 0.11
XRCC3-216ENST00000556682 WAPLQ7Z5K2 1190 aa15.74■□□□□ 0.11
XRCC3-216ENST00000556682 DCAF11Q8TEB1 546 aa15.74■□□□□ 0.11
XRCC3-216ENST00000556682 KDM2AQ9Y2K7 1162 aa15.74■□□□□ 0.11
XRCC3-216ENST00000556682 YTHDC2Q9H6S0 1430 aaKnown RBP15.74■□□□□ 0.11
XRCC3-216ENST00000556682 COL16A1Q07092 1604 aaPredicted RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms