RNA–Protein interactions for RNA: ENST00000556577.1

STRN3-208, Transcript of striatin 3, humanhuman

TSL 5

Gene STRN3, Length 514 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN3-208ENST00000556577 RALGAPBQ86X10 1494 aa11.07□□□□□ -0.64
STRN3-208ENST00000556577 PIK3C2BO00750 1634 aa11.07□□□□□ -0.64
STRN3-208ENST00000556577 ADGRB3O60242 1522 aa11.06□□□□□ -0.64
STRN3-208ENST00000556577 NBPF8Q3BBV2 869 aa11.06□□□□□ -0.64
STRN3-208ENST00000556577 ERVK-7P63135 1459 aa11.06□□□□□ -0.64
STRN3-208ENST00000556577 DSG3P32926 999 aa11.05□□□□□ -0.64
STRN3-208ENST00000556577 MKRN4PQ13434 485 aaPredicted RBP11.05□□□□□ -0.64
STRN3-208ENST00000556577 POLA2Q14181 598 aa11.05□□□□□ -0.64
STRN3-208ENST00000556577 PRAG1Q86YV5 1406 aa11.05□□□□□ -0.64
STRN3-208ENST00000556577 IFT172Q9UG01 1749 aa11.05□□□□□ -0.64
STRN3-208ENST00000556577 FER1L4A9Z1Z3 1794 aa11.05□□□□□ -0.64
STRN3-208ENST00000556577 TRPM1Q7Z4N2 1603 aa11.05□□□□□ -0.64
STRN3-208ENST00000556577 CHGAP10645 457 aaKnown RBP11.04□□□□□ -0.64
STRN3-208ENST00000556577 STAC3Q96MF2 364 aa11.04□□□□□ -0.64
STRN3-208ENST00000556577 MADDQ8WXG6 1647 aa11.04□□□□□ -0.64
STRN3-208ENST00000556577 PPLO60437 1756 aa11.03□□□□□ -0.64
STRN3-208ENST00000556577 EIF4G2P78344 907 aaKnown RBP eCLIP11.03□□□□□ -0.643e-6■■■■□ 25.5
STRN3-208ENST00000556577 SPATA31D1Q6ZQQ2 1576 aa11.03□□□□□ -0.64
STRN3-208ENST00000556577 MYO5BQ9ULV0 1848 aa11.02□□□□□ -0.64
STRN3-208ENST00000556577 MYOM2P54296 1465 aa11.02□□□□□ -0.65
STRN3-208ENST00000556577 DIEXFQ68CQ4 756 aaKnown RBP11.02□□□□□ -0.65
STRN3-208ENST00000556577 SLC52A1Q9NWF4 448 aa11.02□□□□□ -0.65
STRN3-208ENST00000556577 ROCK2O75116 1388 aaKnown RBP11.02□□□□□ -0.65
STRN3-208ENST00000556577 LAMC1P11047 1609 aa11.02□□□□□ -0.65
STRN3-208ENST00000556577 HSPA5P11021 654 aaKnown RBP11.01□□□□□ -0.65
STRN3-208ENST00000556577 KIAA1210Q9ULL0 1709 aa11.01□□□□□ -0.65
STRN3-208ENST00000556577 CARD11Q9BXL7 1154 aa11□□□□□ -0.65
STRN3-208ENST00000556577 ZMYM3Q14202 1370 aa11□□□□□ -0.65
STRN3-208ENST00000556577 TMEM131LA2VDJ0 1609 aa10.99□□□□□ -0.65
STRN3-208ENST00000556577 FBXO31Q5XUX0 539 aaPredicted RBP10.99□□□□□ -0.65
STRN3-208ENST00000556577 RPGRIP1LQ68CZ1 1315 aa10.99□□□□□ -0.65
STRN3-208ENST00000556577 USP47Q96K76 1375 aa10.99□□□□□ -0.65
STRN3-208ENST00000556577 POLR1AO95602 1720 aaPredicted RBP10.98□□□□□ -0.65
STRN3-208ENST00000556577 IDI1Q13907 227 aa10.98□□□□□ -0.65
STRN3-208ENST00000556577 HIRIP3Q9BW71 556 aaPredicted RBP10.98□□□□□ -0.65
STRN3-208ENST00000556577 C3P01024 1663 aa10.98□□□□□ -0.65
STRN3-208ENST00000556577 FKBP8Q14318 412 aa10.97□□□□□ -0.65
STRN3-208ENST00000556577 STAG3Q9UJ98 1225 aa10.97□□□□□ -0.65
STRN3-208ENST00000556577 ZBTB12Q9Y330 459 aaPredicted RBP10.97□□□□□ -0.65
STRN3-208ENST00000556577 GPRASP1Q5JY77 1395 aa10.97□□□□□ -0.65
STRN3-208ENST00000556577 TNRQ92752 1358 aa10.97□□□□□ -0.65
STRN3-208ENST00000556577 NEXMIFQ5QGS0 1516 aa10.97□□□□□ -0.65
STRN3-208ENST00000556577 RIMS1Q86UR5 1692 aaKnown RBP10.96□□□□□ -0.65
STRN3-208ENST00000556577 NRXN1Q9ULB1 1477 aa10.96□□□□□ -0.65
STRN3-208ENST00000556577 KDM5AP29375 1690 aaKnown RBP10.95□□□□□ -0.66
STRN3-208ENST00000556577 IQGAP1P46940 1657 aa10.95□□□□□ -0.66
STRN3-208ENST00000556577 CACNB1Q02641 598 aaPredicted RBP10.94□□□□□ -0.66
STRN3-208ENST00000556577 ADGRF5Q8IZF2 1346 aa10.93□□□□□ -0.66
STRN3-208ENST00000556577 ADAMTSL3P82987 1691 aa10.93□□□□□ -0.66
STRN3-208ENST00000556577 VGFO15240 615 aaPredicted RBP10.93□□□□□ -0.66
STRN3-208ENST00000556577 ABCB7O75027 752 aa10.93□□□□□ -0.66
STRN3-208ENST00000556577 NBPF1Q3BBV0 1214 aa10.93□□□□□ -0.66
STRN3-208ENST00000556577 NLRP1Q9C000 1473 aa10.93□□□□□ -0.66
STRN3-208ENST00000556577 PIK3C2GO75747 1445 aa10.92□□□□□ -0.66
STRN3-208ENST00000556577 ZFYVE9O95405 1425 aa10.92□□□□□ -0.66
STRN3-208ENST00000556577 SETBP1Q9Y6X0 1596 aa10.92□□□□□ -0.66
STRN3-208ENST00000556577 A2ML1A8K2U0 1454 aa10.92□□□□□ -0.66
STRN3-208ENST00000556577 UBR1Q8IWV7 1749 aa10.92□□□□□ -0.66
STRN3-208ENST00000556577 EIF3AQ14152 1382 aaKnown RBP10.91□□□□□ -0.66
STRN3-208ENST00000556577 SCAF11Q99590 1463 aaKnown RBP10.91□□□□□ -0.66
STRN3-208ENST00000556577 DDX10Q13206 875 aaKnown RBP10.9□□□□□ -0.66
STRN3-208ENST00000556577 PROM2Q8N271 834 aa10.9□□□□□ -0.66
STRN3-208ENST00000556577 MYO3AQ8NEV4 1616 aa10.9□□□□□ -0.66
STRN3-208ENST00000556577 RIMS2Q9UQ26 1411 aa10.9□□□□□ -0.66
STRN3-208ENST00000556577 CCDC7Q96M83 1385 aa10.9□□□□□ -0.67
STRN3-208ENST00000556577 ST20-MTHFSA0A0A6YYL1 179 aa10.89□□□□□ -0.67
STRN3-208ENST00000556577 CEBPAP49715 358 aaPredicted RBP10.89□□□□□ -0.67
STRN3-208ENST00000556577 CFAP70Q5T0N1 1121 aa10.89□□□□□ -0.67
STRN3-208ENST00000556577 NUTM2DQ5VT03 806 aaPredicted RBP10.89□□□□□ -0.67
STRN3-208ENST00000556577 WASHC2AQ641Q2 1341 aa10.88□□□□□ -0.67
STRN3-208ENST00000556577 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.88□□□□□ -0.67
STRN3-208ENST00000556577 SETD1BQ9UPS6 1966 aaKnown RBP10.87□□□□□ -0.67
STRN3-208ENST00000556577 HDGFP51858 240 aaKnown RBP10.87□□□□□ -0.67
STRN3-208ENST00000556577 C14orf93Q9H972 538 aaKnown RBP10.87□□□□□ -0.67
STRN3-208ENST00000556577 KIF7Q2M1P5 1343 aa10.86□□□□□ -0.67
STRN3-208ENST00000556577 ADGRB1O14514 1584 aa10.86□□□□□ -0.67
STRN3-208ENST00000556577 POLR3GLQ9BT43 218 aa10.85□□□□□ -0.67
STRN3-208ENST00000556577 ZNF142P52746 1687 aaPredicted RBP10.85□□□□□ -0.67
STRN3-208ENST00000556577 ALKQ9UM73 1620 aa10.84□□□□□ -0.67
STRN3-208ENST00000556577 ARHGEF28Q8N1W1 1705 aaKnown RBP10.84□□□□□ -0.67
STRN3-208ENST00000556577 C11orf95C9JLR9 678 aaPredicted RBP10.84□□□□□ -0.67
STRN3-208ENST00000556577 TMEM2Q9UHN6 1383 aa10.84□□□□□ -0.67
STRN3-208ENST00000556577 CEP170BQ9Y4F5 1589 aaPredicted RBP10.84□□□□□ -0.67
STRN3-208ENST00000556577 QRICH2Q9H0J4 1663 aa10.84□□□□□ -0.67
STRN3-208ENST00000556577 TMF1P82094 1093 aa10.83□□□□□ -0.68
STRN3-208ENST00000556577 SETD1AO15047 1707 aaKnown RBP10.82□□□□□ -0.68
STRN3-208ENST00000556577 SLC24A1O60721 1099 aa10.82□□□□□ -0.68
STRN3-208ENST00000556577 MIER1Q8N108 512 aa10.82□□□□□ -0.68
STRN3-208ENST00000556577 NRXN3Q9Y4C0 1643 aa10.82□□□□□ -0.68
STRN3-208ENST00000556577 SLIT1O75093 1534 aa10.82□□□□□ -0.68
STRN3-208ENST00000556577 ASXL1Q8IXJ9 1541 aa10.82□□□□□ -0.68
STRN3-208ENST00000556577 SPDYE4A6NLX3 237 aa10.81□□□□□ -0.68
STRN3-208ENST00000556577 ANP32CO43423 234 aa10.81□□□□□ -0.68
STRN3-208ENST00000556577 CDCA8Q53HL2 280 aa10.81□□□□□ -0.68
STRN3-208ENST00000556577 TMEM132EQ6IEE7 984 aa10.81□□□□□ -0.68
STRN3-208ENST00000556577 THEMISQ8N1K5 641 aaPredicted RBP10.81□□□□□ -0.68
STRN3-208ENST00000556577 BCANQ96GW7 911 aa10.81□□□□□ -0.68
STRN3-208ENST00000556577 TESK2Q96S53 571 aa10.81□□□□□ -0.68
STRN3-208ENST00000556577 EID1Q9Y6B2 187 aa10.81□□□□□ -0.68
STRN3-208ENST00000556577 CENPJQ9HC77 1338 aaPredicted RBP10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms