RNA–Protein interactions for RNA: ENST00000556496.2

NRXN3-213, Transcript of neurexin 3, humanhuman

TSL 1 (best)

Gene NRXN3, Length 2,737 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN3-213ENST00000556496 MLH3Q9UHC1 1453 aa14.15□□□□□ -0.14
NRXN3-213ENST00000556496 PPRC1Q5VV67 1664 aaKnown RBP14.15□□□□□ -0.14
NRXN3-213ENST00000556496 LMTK2Q8IWU2 1503 aa14.15□□□□□ -0.14
NRXN3-213ENST00000556496 CHGAP10645 457 aaKnown RBP14.14□□□□□ -0.15
NRXN3-213ENST00000556496 MYOM2P54296 1465 aa14.14□□□□□ -0.15
NRXN3-213ENST00000556496 CFAP74Q9C0B2 1584 aa14.14□□□□□ -0.15
NRXN3-213ENST00000556496 RAPGEF3O95398 923 aa14.13□□□□□ -0.15
NRXN3-213ENST00000556496 MAP3K4Q9Y6R4 1608 aa14.13□□□□□ -0.15
NRXN3-213ENST00000556496 AMER1Q5JTC6 1135 aaPredicted RBP14.13□□□□□ -0.15
NRXN3-213ENST00000556496 NPATQ14207 1427 aa14.12□□□□□ -0.15
NRXN3-213ENST00000556496 FRMPD1Q5SYB0 1578 aa14.12□□□□□ -0.15
NRXN3-213ENST00000556496 KIAA1210Q9ULL0 1709 aa14.11□□□□□ -0.15
NRXN3-213ENST00000556496 PDE3BQ13370 1112 aa14.11□□□□□ -0.15
NRXN3-213ENST00000556496 HECW2Q9P2P5 1572 aa14.11□□□□□ -0.15
NRXN3-213ENST00000556496 KIF1BO60333 1816 aa14.11□□□□□ -0.15
NRXN3-213ENST00000556496 SLC24A1O60721 1099 aa14.1□□□□□ -0.15
NRXN3-213ENST00000556496 PPP2R1AP30153 589 aa14.1□□□□□ -0.15
NRXN3-213ENST00000556496 SYNMO15061 1565 aa14.1□□□□□ -0.15
NRXN3-213ENST00000556496 ABCA6Q8N139 1617 aa14.1□□□□□ -0.15
NRXN3-213ENST00000556496 NOS1P29475 1434 aa14.1□□□□□ -0.15
NRXN3-213ENST00000556496 INSRP06213 1382 aa14.1□□□□□ -0.15
NRXN3-213ENST00000556496 BLMP54132 1417 aaPredicted RBP14.09□□□□□ -0.15
NRXN3-213ENST00000556496 NEO1Q92859 1461 aa14.09□□□□□ -0.15
NRXN3-213ENST00000556496 NRXN1Q9ULB1 1477 aa14.08□□□□□ -0.16
NRXN3-213ENST00000556496 MROH2AA6NES4 1674 aa14.08□□□□□ -0.16
NRXN3-213ENST00000556496 ADGRB3O60242 1522 aa14.08□□□□□ -0.16
NRXN3-213ENST00000556496 CDCA7LQ96GN5 454 aa14.08□□□□□ -0.16
NRXN3-213ENST00000556496 RCAN3Q9UKA8 241 aa14.08□□□□□ -0.16
NRXN3-213ENST00000556496 ADAMTS8Q9UP79 889 aa14.08□□□□□ -0.16
NRXN3-213ENST00000556496 CCDC136Q96JN2 1154 aa14.07□□□□□ -0.16
NRXN3-213ENST00000556496 ZMYM4Q5VZL5 1548 aa14.07□□□□□ -0.16
NRXN3-213ENST00000556496 ASXL1Q8IXJ9 1541 aa14.07□□□□□ -0.16
NRXN3-213ENST00000556496 ERVK-7P63135 1459 aa14.06□□□□□ -0.16
NRXN3-213ENST00000556496 RRP1P56182 461 aaKnown RBP14.06□□□□□ -0.16
NRXN3-213ENST00000556496 WDR43Q15061 677 aaKnown RBP eCLIP14.06□□□□□ -0.16
NRXN3-213ENST00000556496 ABCC3O15438 1527 aa14.06□□□□□ -0.16
NRXN3-213ENST00000556496 IFT172Q9UG01 1749 aa14.05□□□□□ -0.16
NRXN3-213ENST00000556496 CFAP65Q6ZU64 1925 aaKnown RBP14.05□□□□□ -0.16
NRXN3-213ENST00000556496 NPC1L1Q9UHC9 1359 aa14.05□□□□□ -0.16
NRXN3-213ENST00000556496 TRAK1Q9UPV9 953 aa14.05□□□□□ -0.16
NRXN3-213ENST00000556496 KDM5AP29375 1690 aaKnown RBP14.04□□□□□ -0.16
NRXN3-213ENST00000556496 CENPJQ9HC77 1338 aaPredicted RBP14.04□□□□□ -0.16
NRXN3-213ENST00000556496 C14orf93Q9H972 538 aaKnown RBP14.04□□□□□ -0.16
NRXN3-213ENST00000556496 MYOM1P52179 1685 aa14.04□□□□□ -0.16
NRXN3-213ENST00000556496 RPGRIP1LQ68CZ1 1315 aa14.03□□□□□ -0.16
NRXN3-213ENST00000556496 PIK3C2GO75747 1445 aa14.03□□□□□ -0.16
NRXN3-213ENST00000556496 CYB5RLQ6IPT4 315 aa14.03□□□□□ -0.16
NRXN3-213ENST00000556496 SBNO2Q9Y2G9 1366 aa14.03□□□□□ -0.16
NRXN3-213ENST00000556496 TMEM132EQ6IEE7 984 aa14.02□□□□□ -0.16
NRXN3-213ENST00000556496 CARD14Q9BXL6 1004 aa14.02□□□□□ -0.16
NRXN3-213ENST00000556496 MYT1Q01538 1121 aa14.02□□□□□ -0.17
NRXN3-213ENST00000556496 NUTM2DQ5VT03 806 aaPredicted RBP14.01□□□□□ -0.17
NRXN3-213ENST00000556496 DIP2CQ9Y2E4 1556 aa14.01□□□□□ -0.17
NRXN3-213ENST00000556496 SETBP1Q9Y6X0 1596 aa14.01□□□□□ -0.17
NRXN3-213ENST00000556496 EXOC6Q8TAG9 804 aa13.99□□□□□ -0.17
NRXN3-213ENST00000556496 YEATS2Q9ULM3 1422 aa13.99□□□□□ -0.17
NRXN3-213ENST00000556496 CAMSAP1Q5T5Y3 1602 aa13.99□□□□□ -0.17
NRXN3-213ENST00000556496 PPLO60437 1756 aa13.99□□□□□ -0.17
NRXN3-213ENST00000556496 MYO3AQ8NEV4 1616 aa13.98□□□□□ -0.17
NRXN3-213ENST00000556496 VGFO15240 615 aaPredicted RBP13.98□□□□□ -0.17
NRXN3-213ENST00000556496 ADGRB1O14514 1584 aa13.98□□□□□ -0.17
NRXN3-213ENST00000556496 FANCIQ9NVI1 1328 aa13.98□□□□□ -0.17
NRXN3-213ENST00000556496 IDI1Q13907 227 aa13.98□□□□□ -0.17
NRXN3-213ENST00000556496 PLEKHH1Q9ULM0 1364 aa13.97□□□□□ -0.17
NRXN3-213ENST00000556496 ANP32EQ9BTT0 268 aa13.97□□□□□ -0.17
NRXN3-213ENST00000556496 SIGLEC1Q9BZZ2 1709 aa13.96□□□□□ -0.17
NRXN3-213ENST00000556496 SLC12A5Q9H2X9 1139 aa13.96□□□□□ -0.17
NRXN3-213ENST00000556496 ARHGAP31Q2M1Z3 1444 aa13.96□□□□□ -0.17
NRXN3-213ENST00000556496 RICTORQ6R327 1708 aa13.96□□□□□ -0.18
NRXN3-213ENST00000556496 CCDC146Q8IYE0 955 aa13.96□□□□□ -0.18
NRXN3-213ENST00000556496 PLIN1O60240 522 aa13.95□□□□□ -0.18
NRXN3-213ENST00000556496 SLC52A1Q9NWF4 448 aa13.95□□□□□ -0.18
NRXN3-213ENST00000556496 FAM69CQ0P6D2 419 aa13.94□□□□□ -0.18
NRXN3-213ENST00000556496 ZNF521Q96K83 1311 aa13.94□□□□□ -0.18
NRXN3-213ENST00000556496 GOLGA2Q08379 1002 aa13.94□□□□□ -0.18
NRXN3-213ENST00000556496 NSD3Q9BZ95 1437 aa13.94□□□□□ -0.18
NRXN3-213ENST00000556496 PIK3C2BO00750 1634 aa13.94□□□□□ -0.18
NRXN3-213ENST00000556496 MSH5O43196 834 aa13.93□□□□□ -0.18
NRXN3-213ENST00000556496 DUSP27Q5VZP5 1158 aa13.93□□□□□ -0.18
NRXN3-213ENST00000556496 NEXMIFQ5QGS0 1516 aa13.93□□□□□ -0.18
NRXN3-213ENST00000556496 SENP3Q9H4L4 574 aaPredicted RBP13.92□□□□□ -0.18
NRXN3-213ENST00000556496 APAF1O14727 1248 aa13.92□□□□□ -0.18
NRXN3-213ENST00000556496 MORC1Q86VD1 984 aa13.92□□□□□ -0.18
NRXN3-213ENST00000556496 QRICH2Q9H0J4 1663 aa13.92□□□□□ -0.18
NRXN3-213ENST00000556496 GLI2P10070 1586 aa13.91□□□□□ -0.18
NRXN3-213ENST00000556496 EVC2Q86UK5 1308 aa13.91□□□□□ -0.18
NRXN3-213ENST00000556496 TNNT2P45379 298 aaPredicted RBP13.91□□□□□ -0.18
NRXN3-213ENST00000556496 ZC3H13Q5T200 1668 aaKnown RBP13.9□□□□□ -0.18
NRXN3-213ENST00000556496 SAFB2Q14151 953 aaKnown RBP eCLIP13.9□□□□□ -0.18
NRXN3-213ENST00000556496 CRBNQ96SW2 442 aa13.89□□□□□ -0.19
NRXN3-213ENST00000556496 STK26Q9P289 416 aa13.89□□□□□ -0.19
NRXN3-213ENST00000556496 POLR3AO14802 1390 aaPredicted RBP13.89□□□□□ -0.19
NRXN3-213ENST00000556496 SLFN5Q08AF3 891 aa13.89□□□□□ -0.19
NRXN3-213ENST00000556496 FBXO31Q5XUX0 539 aaPredicted RBP13.89□□□□□ -0.19
NRXN3-213ENST00000556496 ZFYVE9O95405 1425 aa13.88□□□□□ -0.19
NRXN3-213ENST00000556496 PUS7Q96PZ0 661 aaKnown RBP13.88□□□□□ -0.19
NRXN3-213ENST00000556496 CABP2Q9NPB3 220 aa13.88□□□□□ -0.19
NRXN3-213ENST00000556496 CGNL1Q0VF96 1302 aa13.88□□□□□ -0.19
NRXN3-213ENST00000556496 C20orf194Q5TEA3 1177 aa13.87□□□□□ -0.19
NRXN3-213ENST00000556496 TULP4Q9NRJ4 1543 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms