RNA–Protein interactions for RNA: ENST00000556467.5

CASC1-211, Transcript of cancer susceptibility 1, humanhuman

TSL 5

Gene CASC1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC1-211ENST00000556467 ADGRL2O95490 1459 aa10.96□□□□□ -0.65
CASC1-211ENST00000556467 THEMISQ8N1K5 641 aaPredicted RBP10.96□□□□□ -0.65
CASC1-211ENST00000556467 CERKQ8TCT0 537 aa10.96□□□□□ -0.65
CASC1-211ENST00000556467 SPATA31D1Q6ZQQ2 1576 aa10.94□□□□□ -0.66
CASC1-211ENST00000556467 UGGT1Q9NYU2 1555 aa10.94□□□□□ -0.66
CASC1-211ENST00000556467 NCKAP5LQ9HCH0 1330 aa10.93□□□□□ -0.66
CASC1-211ENST00000556467 ANKLE2Q86XL3 938 aa10.93□□□□□ -0.66
CASC1-211ENST00000556467 ARHGAP31Q2M1Z3 1444 aa10.92□□□□□ -0.66
CASC1-211ENST00000556467 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.92□□□□□ -0.66
CASC1-211ENST00000556467 ERVK-7P63135 1459 aa10.92□□□□□ -0.66
CASC1-211ENST00000556467 ANKRD50Q9ULJ7 1429 aa10.92□□□□□ -0.66
CASC1-211ENST00000556467 ROCK1Q13464 1354 aa10.9□□□□□ -0.66
CASC1-211ENST00000556467 LMTK2Q8IWU2 1503 aa10.89□□□□□ -0.67
CASC1-211ENST00000556467 CD44P16070 742 aaKnown RBP10.89□□□□□ -0.67
CASC1-211ENST00000556467 VWDEQ8N2E2 1590 aa10.89□□□□□ -0.67
CASC1-211ENST00000556467 UBR1Q8IWV7 1749 aa10.89□□□□□ -0.67
CASC1-211ENST00000556467 KDM5AP29375 1690 aaKnown RBP10.89□□□□□ -0.67
CASC1-211ENST00000556467 IQSEC2Q5JU85 1478 aa10.88□□□□□ -0.67
CASC1-211ENST00000556467 PPARGC1BQ86YN6 1023 aaKnown RBP10.88□□□□□ -0.67
CASC1-211ENST00000556467 STAG3Q9UJ98 1225 aa10.88□□□□□ -0.67
CASC1-211ENST00000556467 FARP1Q9Y4F1 1045 aaPredicted RBP10.88□□□□□ -0.67
CASC1-211ENST00000556467 GCC2Q8IWJ2 1684 aa10.88□□□□□ -0.67
CASC1-211ENST00000556467 LTBP4Q8N2S1 1624 aa10.87□□□□□ -0.67
CASC1-211ENST00000556467 TET3O43151 1660 aa10.87□□□□□ -0.67
CASC1-211ENST00000556467 RPRD2Q5VT52 1461 aaKnown RBP10.87□□□□□ -0.67
CASC1-211ENST00000556467 IQGAP1P46940 1657 aa10.86□□□□□ -0.67
CASC1-211ENST00000556467 EFCAB6Q5THR3 1501 aa10.86□□□□□ -0.67
CASC1-211ENST00000556467 ITGAEP38570 1179 aa10.86□□□□□ -0.67
CASC1-211ENST00000556467 EID1Q9Y6B2 187 aa10.86□□□□□ -0.67
CASC1-211ENST00000556467 MED14O60244 1454 aa10.86□□□□□ -0.67
CASC1-211ENST00000556467 UNC13BO14795 1591 aa10.86□□□□□ -0.67
CASC1-211ENST00000556467 NEURL4Q96JN8 1562 aa10.86□□□□□ -0.67
CASC1-211ENST00000556467 SLC52A1Q9NWF4 448 aa10.85□□□□□ -0.67
CASC1-211ENST00000556467 NPHP4O75161 1426 aaPredicted RBP10.84□□□□□ -0.67
CASC1-211ENST00000556467 PIK3C2BO00750 1634 aa10.84□□□□□ -0.67
CASC1-211ENST00000556467 POTEIP0CG38 1075 aa10.84□□□□□ -0.67
CASC1-211ENST00000556467 RRBP1Q9P2E9 1410 aaKnown RBP10.84□□□□□ -0.67
CASC1-211ENST00000556467 ZNF335Q9H4Z2 1342 aaPredicted RBP10.84□□□□□ -0.67
CASC1-211ENST00000556467 IQGAP3Q86VI3 1631 aa10.83□□□□□ -0.68
CASC1-211ENST00000556467 SLIT1O75093 1534 aa10.83□□□□□ -0.68
CASC1-211ENST00000556467 CPS1P31327 1500 aa10.83□□□□□ -0.68
CASC1-211ENST00000556467 SCAF11Q99590 1463 aaKnown RBP10.82□□□□□ -0.68
CASC1-211ENST00000556467 HDGFP51858 240 aaKnown RBP10.82□□□□□ -0.68
CASC1-211ENST00000556467 IDI1Q13907 227 aa10.82□□□□□ -0.68
CASC1-211ENST00000556467 TXNDC2Q86VQ3 553 aa10.82□□□□□ -0.68
CASC1-211ENST00000556467 NOS1P29475 1434 aa10.82□□□□□ -0.68
CASC1-211ENST00000556467 E9PCH4 1651 aa10.81□□□□□ -0.68
CASC1-211ENST00000556467 SYNMO15061 1565 aa10.81□□□□□ -0.68
CASC1-211ENST00000556467 ARHGAP23Q9P227 1491 aa10.81□□□□□ -0.68
CASC1-211ENST00000556467 NUP155O75694 1391 aa10.8□□□□□ -0.68
CASC1-211ENST00000556467 MYO5BQ9ULV0 1848 aa10.79□□□□□ -0.68
CASC1-211ENST00000556467 TMEM2Q9UHN6 1383 aa10.79□□□□□ -0.68
CASC1-211ENST00000556467 ADGRB3O60242 1522 aa10.79□□□□□ -0.68
CASC1-211ENST00000556467 UBAP1LF5GYI3 381 aa10.78□□□□□ -0.68
CASC1-211ENST00000556467 ZNF579Q8NAF0 562 aaKnown RBP10.78□□□□□ -0.68
CASC1-211ENST00000556467 TOM1O60784 492 aa10.77□□□□□ -0.69
CASC1-211ENST00000556467 LTKP29376 864 aa10.77□□□□□ -0.69
CASC1-211ENST00000556467 SPHKAPQ2M3C7 1700 aa10.76□□□□□ -0.69
CASC1-211ENST00000556467 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.75□□□□□ -0.69
CASC1-211ENST00000556467 BCANQ96GW7 911 aa10.75□□□□□ -0.69
CASC1-211ENST00000556467 TMEM131LA2VDJ0 1609 aa10.75□□□□□ -0.69
CASC1-211ENST00000556467 STRCP1A6NGW2 1772 aa10.75□□□□□ -0.69
CASC1-211ENST00000556467 PPP1R15AO75807 674 aaPredicted RBP10.74□□□□□ -0.69
CASC1-211ENST00000556467 CHGAP10645 457 aaKnown RBP10.74□□□□□ -0.69
CASC1-211ENST00000556467 NAIPQ13075 1403 aa10.74□□□□□ -0.69
CASC1-211ENST00000556467 KIF1BO60333 1816 aa10.73□□□□□ -0.69
CASC1-211ENST00000556467 DCBLD2Q96PD2 775 aa10.73□□□□□ -0.69
CASC1-211ENST00000556467 ACIN1Q9UKV3 1341 aaKnown RBP10.73□□□□□ -0.69
CASC1-211ENST00000556467 HFM1A2PYH4 1435 aa10.73□□□□□ -0.69
CASC1-211ENST00000556467 TRIM52Q96A61 297 aa10.72□□□□□ -0.69
CASC1-211ENST00000556467 RIMS2Q9UQ26 1411 aa10.72□□□□□ -0.69
CASC1-211ENST00000556467 LRRC7Q96NW7 1537 aa10.71□□□□□ -0.69
CASC1-211ENST00000556467 CHD2O14647 1828 aaKnown RBP10.7□□□□□ -0.7
CASC1-211ENST00000556467 ZFYVE9O95405 1425 aa10.7□□□□□ -0.7
CASC1-211ENST00000556467 PLEKHG1Q9ULL1 1385 aa10.7□□□□□ -0.7
CASC1-211ENST00000556467 KCNA6P17658 529 aa10.7□□□□□ -0.7
CASC1-211ENST00000556467 XIRP1Q702N8 1843 aaKnown RBP10.7□□□□□ -0.7
CASC1-211ENST00000556467 PIP4K2BP78356 416 aa10.69□□□□□ -0.7
CASC1-211ENST00000556467 SLC26A8Q96RN1 970 aa10.69□□□□□ -0.7
CASC1-211ENST00000556467 DIP2AQ14689 1571 aa10.68□□□□□ -0.7
CASC1-211ENST00000556467 ZNF326Q5BKZ1 582 aaKnown RBP10.67□□□□□ -0.7
CASC1-211ENST00000556467 PROSER2Q86WR7 435 aaPredicted RBP10.67□□□□□ -0.7
CASC1-211ENST00000556467 CREBZFQ9NS37 354 aa10.67□□□□□ -0.7
CASC1-211ENST00000556467 TBX22Q9Y458 520 aa10.67□□□□□ -0.7
CASC1-211ENST00000556467 TRPM2O94759 1503 aa10.67□□□□□ -0.7
CASC1-211ENST00000556467 NKTRP30414 1462 aaKnown RBP10.67□□□□□ -0.7
CASC1-211ENST00000556467 ZRANB1Q9UGI0 708 aa10.66□□□□□ -0.7
CASC1-211ENST00000556467 PIK3R4Q99570 1358 aa10.65□□□□□ -0.7
CASC1-211ENST00000556467 NWD1Q149M9 1564 aa10.65□□□□□ -0.7
CASC1-211ENST00000556467 CLTCL1P53675 1640 aa10.65□□□□□ -0.7
CASC1-211ENST00000556467 TMEM94Q12767 1356 aa10.64□□□□□ -0.71
CASC1-211ENST00000556467 NUTM2DQ5VT03 806 aaPredicted RBP10.63□□□□□ -0.71
CASC1-211ENST00000556467 MSH6P52701 1360 aa10.63□□□□□ -0.71
CASC1-211ENST00000556467 NCOA3Q9Y6Q9 1424 aa10.62□□□□□ -0.71
CASC1-211ENST00000556467 VGFO15240 615 aaPredicted RBP10.62□□□□□ -0.71
CASC1-211ENST00000556467 HSPA1LP34931 641 aa10.62□□□□□ -0.71
CASC1-211ENST00000556467 DISP3Q9P2K9 1392 aa10.62□□□□□ -0.71
CASC1-211ENST00000556467 RPGRIP1LQ68CZ1 1315 aa10.61□□□□□ -0.71
CASC1-211ENST00000556467 SETBP1Q9Y6X0 1596 aa10.61□□□□□ -0.71
CASC1-211ENST00000556467 ADAMTS13Q76LX8 1427 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms