RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 APLP1P51693 650 aa8.32□□□□□ -1.08
ATXN3-241ENST00000556374 VSIG10Q8N0Z9 540 aa8.32□□□□□ -1.08
ATXN3-241ENST00000556374 LAPTM4AQ15012 233 aa8.31□□□□□ -1.08
ATXN3-241ENST00000556374 RSPH4AQ5TD94 716 aa8.31□□□□□ -1.08
ATXN3-241ENST00000556374 RCCD1A6NED2 376 aa8.3□□□□□ -1.08
ATXN3-241ENST00000556374 RNF40O75150 1001 aa8.3□□□□□ -1.08
ATXN3-241ENST00000556374 GGCXP38435 758 aa8.3□□□□□ -1.08
ATXN3-241ENST00000556374 KMT5BQ4FZB7 885 aa8.3□□□□□ -1.08
ATXN3-241ENST00000556374 GNPATO15228 680 aa8.29□□□□□ -1.08
ATXN3-241ENST00000556374 HAP1P54257 671 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-241ENST00000556374 PXYLP1Q8TE99 480 aa8.29□□□□□ -1.08
ATXN3-241ENST00000556374 V9GY48 417 aaPredicted RBP8.29□□□□□ -1.08
ATXN3-241ENST00000556374 ACTN4O43707 911 aaKnown RBP8.28□□□□□ -1.08
ATXN3-241ENST00000556374 ZPR1O75312 459 aa8.27□□□□□ -1.09
ATXN3-241ENST00000556374 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.27□□□□□ -1.09
ATXN3-241ENST00000556374 PPP1R18Q6NYC8 613 aa8.26□□□□□ -1.09
ATXN3-241ENST00000556374 PCDHB3Q9Y5E6 796 aa8.26□□□□□ -1.09
ATXN3-241ENST00000556374 TULP1O00294 542 aaPredicted RBP8.25□□□□□ -1.09
ATXN3-241ENST00000556374 GFRA3O60609 400 aa8.25□□□□□ -1.09
ATXN3-241ENST00000556374 METTL3Q86U44 580 aaKnown RBP8.25□□□□□ -1.09
ATXN3-241ENST00000556374 UNC13AQ9UPW8 1703 aa8.25□□□□□ -1.09
ATXN3-241ENST00000556374 RBM26Q5T8P6 1007 aaKnown RBP8.24□□□□□ -1.09
ATXN3-241ENST00000556374 GPR37O15354 613 aa8.23□□□□□ -1.09
ATXN3-241ENST00000556374 ZNF516Q92618 1163 aa8.23□□□□□ -1.09
ATXN3-241ENST00000556374 DAXXQ9UER7 740 aaPredicted RBP8.23□□□□□ -1.09
ATXN3-241ENST00000556374 KDM2AQ9Y2K7 1162 aa8.23□□□□□ -1.09
ATXN3-241ENST00000556374 NR1I2O75469 434 aa8.21□□□□□ -1.1
ATXN3-241ENST00000556374 TRAF7Q6Q0C0 670 aa8.21□□□□□ -1.1
ATXN3-241ENST00000556374 LCE2BO14633 110 aa8.2□□□□□ -1.1
ATXN3-241ENST00000556374 CFHP08603 1231 aa8.2□□□□□ -1.1
ATXN3-241ENST00000556374 SLC10A3P09131 477 aa8.2□□□□□ -1.1
ATXN3-241ENST00000556374 COPS2P61201 443 aa8.2□□□□□ -1.1
ATXN3-241ENST00000556374 GPIHBP1Q8IV16 184 aa8.2□□□□□ -1.1
ATXN3-241ENST00000556374 SULF1Q8IWU6 871 aa8.2□□□□□ -1.1
ATXN3-241ENST00000556374 PRKD2Q9BZL6 878 aa8.2□□□□□ -1.1
ATXN3-241ENST00000556374 BLOC1S3Q6QNY0 202 aa8.18□□□□□ -1.1
ATXN3-241ENST00000556374 FAM161AQ3B820 660 aa8.17□□□□□ -1.1
ATXN3-241ENST00000556374 ANKLE1Q8NAG6 615 aa8.17□□□□□ -1.1
ATXN3-241ENST00000556374 NACADO15069 1562 aa8.17□□□□□ -1.1
ATXN3-241ENST00000556374 NRG2O14511 850 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-241ENST00000556374 NKX2-3Q8TAU0 364 aa8.16□□□□□ -1.1
ATXN3-241ENST00000556374 SALL2Q9Y467 1007 aaPredicted RBP8.16□□□□□ -1.1
ATXN3-241ENST00000556374 ADH1BP00325 375 aa8.15□□□□□ -1.1
ATXN3-241ENST00000556374 FECHP22830 423 aa8.14□□□□□ -1.11
ATXN3-241ENST00000556374 MAP2K5Q13163 448 aa8.14□□□□□ -1.11
ATXN3-241ENST00000556374 MINK1Q8N4C8 1332 aaPredicted RBP8.13□□□□□ -1.11
ATXN3-241ENST00000556374 GRIPAP1Q4V328 841 aa8.13□□□□□ -1.11
ATXN3-241ENST00000556374 SCUBE3Q8IX30 993 aa8.13□□□□□ -1.11
ATXN3-241ENST00000556374 RNF223E7ERA6 249 aa8.12□□□□□ -1.11
ATXN3-241ENST00000556374 ATP6V1AP38606 617 aa8.12□□□□□ -1.11
ATXN3-241ENST00000556374 GCGRP47871 477 aa8.12□□□□□ -1.11
ATXN3-241ENST00000556374 BICRAQ9NZM4 1560 aa8.12□□□□□ -1.11
ATXN3-241ENST00000556374 SLC19A1P41440 591 aa8.1□□□□□ -1.11
ATXN3-241ENST00000556374 MORN1Q5T089 497 aa8.1□□□□□ -1.11
ATXN3-241ENST00000556374 SLC6A16Q9GZN6 736 aa8.1□□□□□ -1.11
ATXN3-241ENST00000556374 IRF6O14896 467 aa8.09□□□□□ -1.11
ATXN3-241ENST00000556374 PRR20EP86478 221 aa8.09□□□□□ -1.11
ATXN3-241ENST00000556374 PRR20CP86479 221 aa8.09□□□□□ -1.11
ATXN3-241ENST00000556374 PRR20DP86480 221 aa8.09□□□□□ -1.11
ATXN3-241ENST00000556374 PRR20BP86481 221 aa8.09□□□□□ -1.11
ATXN3-241ENST00000556374 PRR20AP86496 221 aa8.09□□□□□ -1.11
ATXN3-241ENST00000556374 ZNF787Q6DD87 383 aa8.09□□□□□ -1.11
ATXN3-241ENST00000556374 ZNF598Q86UK7 904 aaKnown RBP8.09□□□□□ -1.11
ATXN3-241ENST00000556374 RDH13Q8NBN7 331 aa8.09□□□□□ -1.11
ATXN3-241ENST00000556374 CC2D2AQ9P2K1 1620 aa8.08□□□□□ -1.12
ATXN3-241ENST00000556374 DDX11L8A8MPP1 907 aa8.08□□□□□ -1.12
ATXN3-241ENST00000556374 SPRYD7Q5W111 196 aa8.08□□□□□ -1.12
ATXN3-241ENST00000556374 LMOD2Q6P5Q4 547 aa8.08□□□□□ -1.12
ATXN3-241ENST00000556374 SPSB2Q99619 263 aa8.08□□□□□ -1.12
ATXN3-241ENST00000556374 CECR2Q9BXF3 1484 aa8.07□□□□□ -1.12
ATXN3-241ENST00000556374 THAP11Q96EK4 314 aa8.07□□□□□ -1.12
ATXN3-241ENST00000556374 PHOX2BQ99453 314 aa8.07□□□□□ -1.12
ATXN3-241ENST00000556374 TLL1O43897 1013 aa8.06□□□□□ -1.12
ATXN3-241ENST00000556374 FMNL1O95466 1100 aaPredicted RBP8.06□□□□□ -1.12
ATXN3-241ENST00000556374 S1PR4O95977 384 aa8.06□□□□□ -1.12
ATXN3-241ENST00000556374 USP46P62068 366 aa8.06□□□□□ -1.12
ATXN3-241ENST00000556374 PDZRN3Q9UPQ7 1066 aa8.06□□□□□ -1.12
ATXN3-241ENST00000556374 CD46P15529 392 aa8.05□□□□□ -1.12
ATXN3-241ENST00000556374 RPIAP49247 311 aa8.05□□□□□ -1.12
ATXN3-241ENST00000556374 FUT2Q10981 343 aa8.05□□□□□ -1.12
ATXN3-241ENST00000556374 Q3C1V9 767 aa8.05□□□□□ -1.12
ATXN3-241ENST00000556374 MSS51Q4VC12 460 aa8.05□□□□□ -1.12
ATXN3-241ENST00000556374 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.05□□□□□ -1.12
ATXN3-241ENST00000556374 PUS10Q3MIT2 529 aaKnown RBP8.03□□□□□ -1.12
ATXN3-241ENST00000556374 BRICD5Q6PL45 260 aa8.03□□□□□ -1.12
ATXN3-241ENST00000556374 CLCN1P35523 988 aa8.02□□□□□ -1.13
ATXN3-241ENST00000556374 EMID1Q96A84 441 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-241ENST00000556374 SLC27A5Q9Y2P5 690 aa8.02□□□□□ -1.13
ATXN3-241ENST00000556374 DGAT1O75907 488 aa8.01□□□□□ -1.13
ATXN3-241ENST00000556374 LIAT1Q6ZQX7 453 aa8.01□□□□□ -1.13
ATXN3-241ENST00000556374 ZNF775Q96BV0 537 aaPredicted RBP8.01□□□□□ -1.13
ATXN3-241ENST00000556374 GPCPD1Q9NPB8 672 aa8.01□□□□□ -1.13
ATXN3-241ENST00000556374 KDM4AO75164 1064 aa8□□□□□ -1.13
ATXN3-241ENST00000556374 SHROOM4Q9ULL8 1493 aa8□□□□□ -1.13
ATXN3-241ENST00000556374 PPEF1O14829 653 aaPredicted RBP7.99□□□□□ -1.13
ATXN3-241ENST00000556374 GDF9O60383 454 aa7.99□□□□□ -1.13
ATXN3-241ENST00000556374 CD2BP2O95400 341 aaKnown RBP7.99□□□□□ -1.13
ATXN3-241ENST00000556374 ZNF697Q5TEC3 545 aa7.99□□□□□ -1.13
ATXN3-241ENST00000556374 TRIM67Q6ZTA4 783 aa7.99□□□□□ -1.13
ATXN3-241ENST00000556374 MMP16P51512 607 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms